transcript:BL67424_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL67424_cuf0
Unique Nametranscript:BL67424_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL67424_cuf0

>transcript:BL67424_cuf0-protein ID=transcript:BL67424_cuf0-protein|Name=transcript:BL67424_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=102bp
FFFFFSNDFNFNMVHNFARIHNSARVHYSIRVHNSTRIHNFTRIHNSTRV
NNSVRVHSSIRVHISTWVHSIGYIIPSGHIIPSGYIIPSGYIIPIILCCL
ES
Run BLAST on NCBI

mRNA from alignment at Sc0000011:2135490..2136996+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL67424_cuf0 ID=transcript:BL67424_cuf0|Name=transcript:BL67424_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1507bp|location=Sequence derived from alignment at Sc0000011:2135490..2136996+ (Branchiostoma lanceolatum)
TTTTTTTTTTTTTTTTTCAAATGATTTTAATTTCAACATGGTACATAATT TCGCCAGGATACATAATTCAGCCAGGGTTCATTATTCCATCAGGGTACAT AATTCTACCAGAATACATAATTTCACCAGGATACATAATTCCACCAGGGT AAATAATTCCGTTCGGGTACATAGTTCGATCAGGGTACATATTTCCACCT GGGTACATAGCATCGGGTACATAATTCCATCGGGGCACATAATTCCGTCA GGATACATAATTCCATCAGGGTACATAATTCCAATTATTCTCTGCTGTTT GGAATCTTAACATTGTATAGTGAACACAAATGCAGAAAAGGAAGGAACAC ATCATCCCTCATTAGTTGTCTAGGATTATCTTTACATTTTAACCAGGAGA CATAGATCGAGTACTTTGCTATTGTTAATAAGCTAGTACAGCATACTTTG GATCCTAACAAGACTTCATCCTGAGTAATGCTAATTCTACACCAGAAGTT TCTTAATCTACTGCATTGTAAAAACATATATTCATAATTTTCGATCTTTT CACATATATCACAGATAGGGCTGTAAATGTTACCAGACAAATCTCTTACT TTCCATTTGAGCAGGTACTTACAAGGTAGTATTCTATGTAATAATTTAAA GTTAAATTCTCGCAACTTATTATGTTTGATCGTACAAGTCTGGCATTTCC ATATCGTTCTCCAGTCCAGATTAGGGATTGTAAGATCCCAATATGCCTGG GAGGTAGGTGTTACAGGGTTATGAAATACATAATTTGAATACAAGTATCT GCTAGTAAAAGTGTCAGCTATTTTACGCTGCCCATTAAACCAGAGTGAGT TGCTTTCNTCTGGCATTTCCATATCGTTCTCCAGTCCAGATTAGGGATTG TAAGATCCCAATATGCCTGGGAGGTAGGTGTTACAGTGACTGTTATGAAA TACATAATTTGAATACAAGTATCTGCTAGTAAAAGTGTCAGCTATTTTAC GCTGCCCATTAAACCAGAGTGAGTTGCTTTCAAGGAATTGGCTACCATTA TCTTCTTCAGTAAGCCATCTCCGCCCTGTTGCCAATTTAACACAGGTGAA CTCGCAAAGCCAGTTATTCCTGATGGTGAGTCTCTCGAGCAACGACACAG GCGTTATATAGTCTGAGGCACAGCATATATCTCTTACAAATATAATACCA CTATCTATCCAGTGTCTATAGTAGAGTGTTTTGTTGTTCAACATAAAATT TTCGTTACACCAAATTATTTCGTTACGTACATGGGCAAAATCTGTCTTTC CTCCTCCCAAATCATGCCAAGACAATACTACATCCCTGTAGAAAGGGGGA AGGGTTAACAGAGAAGGTGCATCTGCTTTTCGTTTGAAATTAAGTCGAAA GACCAGAAAGTCTTTGCCAAGCTTGTCAATAAAGTGTAAAGGTATTAGTC GCCATCTACAAATTCTGCTGGGATCCTTTGGAGTTTTAATTATCCTTCGG ACCCAAG

Coding sequence (CDS) from alignment at Sc0000011:2135490..2136996+

>transcript:BL67424_cuf0 ID=transcript:BL67424_cuf0|Name=transcript:BL67424_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=309bp|location=Sequence derived from alignment at Sc0000011:2135490..2136996+ (Branchiostoma lanceolatum)
TTTTTTTTTTTTTTTTCAAATGATTTTAATTTCAACATGGTACATAATTT
CGCCAGGATACATAATTCAGCCAGGGTTCATTATTCCATCAGGGTACATA
ATTCTACCAGAATACATAATTTCACCAGGATACATAATTCCACCAGGGTA
AATAATTCCGTTCGGGTACATAGTTCGATCAGGGTACATATTTCCACCTG
GGTACATAGCATCGGGTACATAATTCCATCGGGGCACATAATTCCGTCAG
GATACATAATTCCATCAGGGTACATAATTCCAATTATTCTCTGCTGTTTG
GAATCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL67424gene:BL67424Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL67424_cuf0-E1BL67424_cuf0-E1-1564476830-102952Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL67424_cuf0transcript:BL67424_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000011genomeSc0000011:2135490..2136996 +
Properties
Property NameValue
Transcript idBL67424_cuf0
Biotypeprotein_coding