transcript:BL67931_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL67931_cuf0
Unique Nametranscript:BL67931_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL67931_cuf0

>transcript:BL67931_cuf0-protein ID=transcript:BL67931_cuf0-protein|Name=transcript:BL67931_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=133bp
DFKYLGSYIVNPEKDFTVKKALAWNACNKLDRIWSSSVNNNLKIQVFRTA
VEPILLYGAETWTLTSRLEKKLDGTYTSLLRKAQNLSWKHHPTIQTIYGS
LPRVSHRLRQRRVQFAGHCLRASEEIISSLILL
Run BLAST on NCBI

mRNA from alignment at Sc0000300:169468..169868+

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL67931_cuf0 ID=transcript:BL67931_cuf0|Name=transcript:BL67931_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=401bp|location=Sequence derived from alignment at Sc0000300:169468..169868+ (Branchiostoma lanceolatum)
GATTTCAAATACCTCGGATCTTACATTGTAAACCCTGAAAAAGATTTCAC
CGTAAAGAAAGCCCTAGCATGGAATGCATGTAATAAACTGGATAGAATCT
GGAGTTCTAGCGTAAATAACAATCTTAAAATACAAGTTTTCCGTACTGCA
GTTGAGCCAATTTTGCTGTACGGTGCTGAAACCTGGACTTTGACTTCTCG
CTTGGAGAAGAAACTAGATGGTACTTATACTTCACTTCTACGCAAAGCAC
AGAACTTGAGTTGGAAACATCACCCAACTATCCAGACCATTTACGGTTCT
CTACCACGGGTGTCACACAGACTCAGACAGAGAAGGGTCCAGTTTGCTGG
TCACTGCCTTCGGGCAAGTGAGGAGATAATCTCCTCACTCATTCTGTTGA
G

Coding sequence (CDS) from alignment at Sc0000300:169468..169868+

>transcript:BL67931_cuf0 ID=transcript:BL67931_cuf0|Name=transcript:BL67931_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=399bp|location=Sequence derived from alignment at Sc0000300:169468..169868+ (Branchiostoma lanceolatum)
GATTTCAAATACCTCGGATCTTACATTGTAAACCCTGAAAAAGATTTCAC
CGTAAAGAAAGCCCTAGCATGGAATGCATGTAATAAACTGGATAGAATCT
GGAGTTCTAGCGTAAATAACAATCTTAAAATACAAGTTTTCCGTACTGCA
GTTGAGCCAATTTTGCTGTACGGTGCTGAAACCTGGACTTTGACTTCTCG
CTTGGAGAAGAAACTAGATGGTACTTATACTTCACTTCTACGCAAAGCAC
AGAACTTGAGTTGGAAACATCACCCAACTATCCAGACCATTTACGGTTCT
CTACCACGGGTGTCACACAGACTCAGACAGAGAAGGGTCCAGTTTGCTGG
TCACTGCCTTCGGGCAAGTGAGGAGATAATCTCCTCACTCATTCTGTTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL67931gene:BL67931Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL67931_cuf0-E1BL67931_cuf0-E1-1564476830-428732Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL67931_cuf0transcript:BL67931_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000300genomeSc0000300:169468..169868 +
Properties
Property NameValue
Transcript idBL67931_cuf0
Biotypeprotein_coding