transcript:BL67979_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL67979_cuf0
Unique Nametranscript:BL67979_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL67979_cuf0

>transcript:BL67979_cuf0-protein ID=transcript:BL67979_cuf0-protein|Name=transcript:BL67979_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=117bp
GSAQNEPQDQGSALFAYLLKLMSWSGYEYIVSDSTRTRESFCFSTRQSAK
ARLIGSLLDVGGETAGGSEASSFLAMAGQLEGIEPGYTQPRCESQPPKLF
HCNYSELTLSQTSPVTL
Run BLAST on NCBI

mRNA from alignment at Sc0000694:14055..14880-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL67979_cuf0 ID=transcript:BL67979_cuf0|Name=transcript:BL67979_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=826bp|location=Sequence derived from alignment at Sc0000694:14055..14880- (Branchiostoma lanceolatum)
CGGAAGTGCCCAGAACGAGCCGCAGGATCAGGGCTCAGCTTTGTTCGCAT ATCTGTTGAAGCTGATGAGTTGGTCGGGCTATGAGTACATTGTGAGCGAT TCTACACGAACGAGAGAATCATTTTGCTTTTCTACTCGACAATCAGCTAA AGCCAGGTAAGAGTGGGGTGCTGTAGAATGTTCATAATATTTCATCCGTT GGATGTGCTCAGTCCTAGCCCGTGGGGATATTAGAGTAGCCTTTCTACAA TCAGTGACGGATAACACCGAGTAGCACGGACTTACGTACACCTTCCTGGT CATGACTACTTTCGTCCCGGTCCAATACGTTTTGTTTTCGGATAGCTCTA CTGCCGGCTTTATACTAGGCTCTACCAGCCTCCGCGGGTCGCTGGGAAAA TAGCAGAAATTGGCCAAATAGAGTCAATTGTATGAAGAGAGTCGGCTACG GAGAAACCCTCCATGGTCAAAGTCCCCCGGCCCGGCAAATGTTCTCCCTA TAGCCGGCGCGGTTAGTCTGGTAGAGACTAGCTTTATATCGTTTCTCCTT GTTCTGTGGAGTTGATCTGTTCTGGCACAAACTTTCTACTAGGTTTATTG ATTTCCCCGTGTATCCTGTAACTGTGCAGGTTGATCGGGTCTCTCCTGGA CGTCGGCGGAGAAACGGCTGGTGGCAGCGAGGCGAGCTCCTTCCTGGCGA TGGCGGGTCAATTGGAGGGTATCGAACCCGGCTACACTCAGCCGCGGTGT GAATCTCAGCCGCCAAAACTCTTCCACTGCAACTATTCCGAACTGACGCT CTCTCAAACTAGTCCCGTGACCTTAT

Coding sequence (CDS) from alignment at Sc0000694:14055..14880-

>transcript:BL67979_cuf0 ID=transcript:BL67979_cuf0|Name=transcript:BL67979_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=702bp|location=Sequence derived from alignment at Sc0000694:14055..14880- (Branchiostoma lanceolatum)
GGAAGTGCCCAGAACGAGCCGCAGGATCAGGGCTCAGCTTTGTTCGCATA
TCTGTTGAAGCTGATGAGTTGGTCGGGCTATGAGTACATTGTGAGCGATT
CTACACGAACGAGAGAATCATTTTGCTTTTCTACTCGACAATCAGCTAAA
GCCAGGTTGATCGGGTCTCTCCTGGACGTCGGCGGAGAAACGGCTGGTGG
CAGCGAGGCGAGCTCCTTCCTGGCGATGGCGGGTCAATTGGAGGGTATCG
AACCCGGCTACACTCAGCCGCGGTGTGAATCTCAGCCGCCAAAACTCTTC
CACTGCAACTATTCCGAACTGACGCTCTCTCAAACTAGTCCCGTGACCTT
AGGAAGTGCCCAGAACGAGCCGCAGGATCAGGGCTCAGCTTTGTTCGCAT
ATCTGTTGAAGCTGATGAGTTGGTCGGGCTATGAGTACATTGTGAGCGAT
TCTACACGAACGAGAGAATCATTTTGCTTTTCTACTCGACAATCAGCTAA
AGCCAGGTTGATCGGGTCTCTCCTGGACGTCGGCGGAGAAACGGCTGGTG
GCAGCGAGGCGAGCTCCTTCCTGGCGATGGCGGGTCAATTGGAGGGTATC
GAACCCGGCTACACTCAGCCGCGGTGTGAATCTCAGCCGCCAAAACTCTT
CCACTGCAACTATTCCGAACTGACGCTCTCTCAAACTAGTCCCGTGACCT
TA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL67979gene:BL67979Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL67979_cuf0-E1BL67979_cuf0-E1-1564476830-493859Branchiostoma lanceolatumexon
BL67979_cuf0-E2BL67979_cuf0-E2-1564476830-493856Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL67979_cuf0transcript:BL67979_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000694genomeSc0000694:14055..14880 -
Properties
Property NameValue
Transcript idBL67979_cuf0
Biotypeprotein_coding