transcript:BL68669_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL68669_cuf0
Unique Nametranscript:BL68669_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL68669_cuf0

>transcript:BL68669_cuf0-protein ID=transcript:BL68669_cuf0-protein|Name=transcript:BL68669_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=118bp
TTVTSEMLYTTSLMIKKVASKDSGNFLVSLSNAYGEAKAMMTLQLETREK
EEKPKFLKQLKTVKQEKVEVVETVVEKKEPAAFIKVPKNWTGTEGENAIF
YCKVKGEPRPTLTWSNGD
Run BLAST on NCBI

mRNA from alignment at Sc0000008:5366854..5367208+

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL68669_cuf0 ID=transcript:BL68669_cuf0|Name=transcript:BL68669_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=355bp|location=Sequence derived from alignment at Sc0000008:5366854..5367208+ (Branchiostoma lanceolatum)
ACAACAGTGACAAGTGAGATGTTGTACACCACCTCTCTTATGATCAAGAA
GGTCGCGTCAAAGGATTCAGGAAACTTTCTTGTGAGCCTGTCAAATGCGT
ACGGAGAGGCCAAAGCCATGATGACTCTCCAGTTAGAGACTCGGGAAAAG
GAAGAAAAACCAAAGTTCCTAAAGCAGTTAAAAACAGTCAAACAAGAAAA
AGTCGAAGTCGTAGAAACAGTTGTTGAAAAGAAAGAACCAGCAGCTTTCA
TCAAAGTTCCTAAGAACTGGACGGGCACGGAAGGAGAGAACGCGATTTTC
TATTGCAAAGTCAAGGGCGAACCTCGCCCCACACTTACGTGGTCCAATGG
AGATC

Coding sequence (CDS) from alignment at Sc0000008:5366854..5367208+

>transcript:BL68669_cuf0 ID=transcript:BL68669_cuf0|Name=transcript:BL68669_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=354bp|location=Sequence derived from alignment at Sc0000008:5366854..5367208+ (Branchiostoma lanceolatum)
ACAACAGTGACAAGTGAGATGTTGTACACCACCTCTCTTATGATCAAGAA
GGTCGCGTCAAAGGATTCAGGAAACTTTCTTGTGAGCCTGTCAAATGCGT
ACGGAGAGGCCAAAGCCATGATGACTCTCCAGTTAGAGACTCGGGAAAAG
GAAGAAAAACCAAAGTTCCTAAAGCAGTTAAAAACAGTCAAACAAGAAAA
AGTCGAAGTCGTAGAAACAGTTGTTGAAAAGAAAGAACCAGCAGCTTTCA
TCAAAGTTCCTAAGAACTGGACGGGCACGGAAGGAGAGAACGCGATTTTC
TATTGCAAAGTCAAGGGCGAACCTCGCCCCACACTTACGTGGTCCAATGG
AGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL68669gene:BL68669Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL68669_cuf0-E1BL68669_cuf0-E1-1564476830-86769Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL68669_cuf0transcript:BL68669_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000008genomeSc0000008:5366854..5367208 +
Properties
Property NameValue
Transcript idBL68669_cuf0
Biotypeprotein_coding