transcript:BL68830_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL68830_cuf0
Unique Nametranscript:BL68830_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL68830_cuf0

>transcript:BL68830_cuf0-protein ID=transcript:BL68830_cuf0-protein|Name=transcript:BL68830_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=160bp
LIYNQITNIQPGAFSNLQNLRKLYLNNNKITIIHPSMFSDLPQLQALYLK
DNQMVTLPPTAYSMLSSISYIMISNNPWQCDCRMLPFRQKMSGSQPFENQ
ITCSQPAKLQLRKLKDILPEDLNNCEEPTIVSFQMVDKSTLVKGEALHLV
CEATGIPKPD
Run BLAST on NCBI

mRNA from alignment at Sc0000042:1521391..1521871+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL68830_cuf0 ID=transcript:BL68830_cuf0|Name=transcript:BL68830_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=481bp|location=Sequence derived from alignment at Sc0000042:1521391..1521871+ (Branchiostoma lanceolatum)
CCTGATCTATAACCAAATAACTAACATTCAGCCTGGTGCATTTTCAAACT
TACAAAACCTACGAAAGTTGTACCTGAACAACAACAAGATAACAATCATT
CATCCCAGTATGTTCTCAGATCTGCCACAGCTGCAAGCATTGTACTTGAA
GGACAACCAGATGGTAACACTTCCACCGACTGCCTATTCCATGCTATCAT
CAATCTCTTACATAATGATTTCCAACAACCCCTGGCAGTGTGACTGTAGA
ATGCTTCCCTTTAGGCAAAAGATGAGTGGGTCTCAACCATTTGAAAATCA
GATAACTTGTTCCCAACCAGCCAAGTTACAATTGAGGAAGCTGAAAGATA
TCCTTCCAGAAGATCTGAACAACTGTGAAGAGCCAACTATTGTAAGCTTT
CAGATGGTTGACAAAAGCACATTGGTGAAGGGGGAGGCTCTCCATTTGGT
CTGTGAAGCCACAGGTATACCTAAACCAGAC

Coding sequence (CDS) from alignment at Sc0000042:1521391..1521871+

>transcript:BL68830_cuf0 ID=transcript:BL68830_cuf0|Name=transcript:BL68830_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=480bp|location=Sequence derived from alignment at Sc0000042:1521391..1521871+ (Branchiostoma lanceolatum)
CTGATCTATAACCAAATAACTAACATTCAGCCTGGTGCATTTTCAAACTT
ACAAAACCTACGAAAGTTGTACCTGAACAACAACAAGATAACAATCATTC
ATCCCAGTATGTTCTCAGATCTGCCACAGCTGCAAGCATTGTACTTGAAG
GACAACCAGATGGTAACACTTCCACCGACTGCCTATTCCATGCTATCATC
AATCTCTTACATAATGATTTCCAACAACCCCTGGCAGTGTGACTGTAGAA
TGCTTCCCTTTAGGCAAAAGATGAGTGGGTCTCAACCATTTGAAAATCAG
ATAACTTGTTCCCAACCAGCCAAGTTACAATTGAGGAAGCTGAAAGATAT
CCTTCCAGAAGATCTGAACAACTGTGAAGAGCCAACTATTGTAAGCTTTC
AGATGGTTGACAAAAGCACATTGGTGAAGGGGGAGGCTCTCCATTTGGTC
TGTGAAGCCACAGGTATACCTAAACCAGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL68830gene:BL68830Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL68830_cuf0-E1BL68830_cuf0-E1-1564476830-208560Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL68830_cuf0transcript:BL68830_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000042genomeSc0000042:1521391..1521871 +
Properties
Property NameValue
Transcript idBL68830_cuf0
Biotypeprotein_coding