|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL68895_cuf0 >transcript:BL68895_cuf0-protein ID=transcript:BL68895_cuf0-protein|Name=transcript:BL68895_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=396bp
SDRQHMDKSPPNKFGRLVIDLCAQANLRILNGRVAGDLQGKFTCHQPRGS
STVDYMISSQSFIPHILSFRVNPLTLFSDHCMISTLIHSNPTKHNYEVKQ
KSPNSKPLPKRFHWNEKSTEKFLYSLSKPNFTERLHTLSSICQKNTNTME
IEKHVSEFSAILREAGEQSLCLKRIRKRPQRMQNKKWFDKTCKEMKREVK
NIASLFEKNPSNPVIRGRFFQCRKEYKKLLKKKKRDFHQQIMNQLSLLKE
RSPSAFWDLVNKLKPEKTVEDNQISDEEWLKHFKNLDKSPNSSVDNCLLN
QNTQTSFPSTPSNASVLDCTITLEELNAAISKLKNNKSSGNDSILNEMLK
SGKMQLKEPLLNLFNTCLQNGYFPQEWSVSHIVPIHKSGDTSLPDN Run BLAST on NCBI mRNA from alignment at xpSc0040002:3144..4334- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL68895_cuf0 ID=transcript:BL68895_cuf0|Name=transcript:BL68895_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1191bp|location=Sequence derived from alignment at xpSc0040002:3144..4334- (Branchiostoma lanceolatum)
CTCGGACAGACAACACATGGACAAATCGCCTCCGAACAAATTTGGCAGAC
TTGTAATCGATCTGTGCGCACAAGCAAACCTAAGAATTCTAAACGGAAGG
GTGGCTGGCGATCTACAGGGCAAATTCACCTGCCATCAACCCCGCGGCAG
CAGCACTGTAGACTATATGATTTCCAGCCAGTCCTTTATCCCACACATTT
TATCTTTTCGTGTTAATCCGCTTACGCTATTCTCAGACCATTGCATGATT
TCGACTTTGATTCACTCAAATCCAACAAAGCACAATTACGAAGTAAAACA
GAAAAGCCCAAACTCCAAACCTCTCCCCAAACGGTTCCACTGGAACGAAA
AATCTACCGAAAAATTCCTCTATTCACTTAGTAAACCTAACTTTACCGAA
AGACTTCACACTCTCTCCTCTATTTGCCAAAAAAACACAAACACAATGGA
AATCGAAAAACATGTCTCCGAATTTAGCGCTATTCTAAGAGAGGCGGGCG
AACAGTCGCTCTGTTTAAAAAGAATTAGGAAGCGCCCTCAAAGAATGCAA
AACAAGAAATGGTTTGACAAAACATGTAAGGAAATGAAGCGTGAAGTTAA
AAACATTGCCTCTCTATTTGAAAAAAATCCATCTAATCCAGTAATTAGGG
GTAGGTTCTTTCAATGTAGAAAAGAATACAAGAAATTACTGAAAAAGAAA
AAGCGGGATTTTCATCAACAAATTATGAATCAATTATCATTATTAAAGGA
AAGAAGCCCAAGTGCCTTCTGGGATTTAGTCAATAAATTGAAACCAGAAA
AAACAGTTGAGGATAACCAAATTTCTGACGAGGAATGGTTAAAGCATTTC
AAAAATCTAGACAAATCCCCAAACAGCTCTGTAGATAACTGTCTTCTAAA
CCAAAATACGCAAACATCATTTCCGTCCACCCCTTCAAACGCATCGGTAC
TTGATTGCACGATCACATTAGAAGAACTAAACGCTGCAATCTCTAAACTA
AAGAACAACAAATCAAGCGGAAATGATAGTATTCTAAATGAAATGTTAAA
ATCTGGCAAAATGCAGCTAAAAGAGCCCCTTCTCAATCTCTTTAACACTT
GTTTACAAAACGGTTATTTTCCACAAGAATGGTCAGTCAGTCACATTGTT
CCCATCCACAAGTCAGGAGACACCTCCCTGCCAGACAACTA Coding sequence (CDS) from alignment at xpSc0040002:3144..4334- >transcript:BL68895_cuf0 ID=transcript:BL68895_cuf0|Name=transcript:BL68895_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1188bp|location=Sequence derived from alignment at xpSc0040002:3144..4334- (Branchiostoma lanceolatum)
TCGGACAGACAACACATGGACAAATCGCCTCCGAACAAATTTGGCAGACT
TGTAATCGATCTGTGCGCACAAGCAAACCTAAGAATTCTAAACGGAAGGG
TGGCTGGCGATCTACAGGGCAAATTCACCTGCCATCAACCCCGCGGCAGC
AGCACTGTAGACTATATGATTTCCAGCCAGTCCTTTATCCCACACATTTT
ATCTTTTCGTGTTAATCCGCTTACGCTATTCTCAGACCATTGCATGATTT
CGACTTTGATTCACTCAAATCCAACAAAGCACAATTACGAAGTAAAACAG
AAAAGCCCAAACTCCAAACCTCTCCCCAAACGGTTCCACTGGAACGAAAA
ATCTACCGAAAAATTCCTCTATTCACTTAGTAAACCTAACTTTACCGAAA
GACTTCACACTCTCTCCTCTATTTGCCAAAAAAACACAAACACAATGGAA
ATCGAAAAACATGTCTCCGAATTTAGCGCTATTCTAAGAGAGGCGGGCGA
ACAGTCGCTCTGTTTAAAAAGAATTAGGAAGCGCCCTCAAAGAATGCAAA
ACAAGAAATGGTTTGACAAAACATGTAAGGAAATGAAGCGTGAAGTTAAA
AACATTGCCTCTCTATTTGAAAAAAATCCATCTAATCCAGTAATTAGGGG
TAGGTTCTTTCAATGTAGAAAAGAATACAAGAAATTACTGAAAAAGAAAA
AGCGGGATTTTCATCAACAAATTATGAATCAATTATCATTATTAAAGGAA
AGAAGCCCAAGTGCCTTCTGGGATTTAGTCAATAAATTGAAACCAGAAAA
AACAGTTGAGGATAACCAAATTTCTGACGAGGAATGGTTAAAGCATTTCA
AAAATCTAGACAAATCCCCAAACAGCTCTGTAGATAACTGTCTTCTAAAC
CAAAATACGCAAACATCATTTCCGTCCACCCCTTCAAACGCATCGGTACT
TGATTGCACGATCACATTAGAAGAACTAAACGCTGCAATCTCTAAACTAA
AGAACAACAAATCAAGCGGAAATGATAGTATTCTAAATGAAATGTTAAAA
TCTGGCAAAATGCAGCTAAAAGAGCCCCTTCTCAATCTCTTTAACACTTG
TTTACAAAACGGTTATTTTCCACAAGAATGGTCAGTCAGTCACATTGTTC
CCATCCACAAGTCAGGAGACACCTCCCTGCCAGACAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0040002 | genome | xpSc0040002:3144..4334 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL68895_cuf0 |
| Biotype | protein_coding |
|
