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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL69642_cuf0 >transcript:BL69642_cuf0-protein ID=transcript:BL69642_cuf0-protein|Name=transcript:BL69642_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=117bp
MSEGQSKNTHCSSKQAVRVPECTQLTSCGINYLPHKNHDCSTCRNLTSNF
DAPLQYLGYPLGGPLLNSAFLSANPTHPLNIMHNHQHFSSYAVHKQTNTQ
TNTARCSTVRKCQVNHL Run BLAST on NCBI mRNA from alignment at xfSc0003388:51..1874- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL69642_cuf0 ID=transcript:BL69642_cuf0|Name=transcript:BL69642_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1824bp|location=Sequence derived from alignment at xfSc0003388:51..1874- (Branchiostoma lanceolatum)
GCATCCTGTCTTCCCAAGGAACTGTAAGTTCCAACAGCACCAGCTGCGCT
GAATGTCTAGAAAGTAGAGTCAAGTATGGCCAGAGATTTGTCGCAAAAAA
AAGAGTAAAATGTCTGTAGGAAATGCTAGTTATTTGTCTATATCGGCATG
TATAGACCAATCACTTGCAGACGCCATAAGTCCTGGATGCTCTCCTTGTA
TCTTCCCTTTGTTCTTCCCTTTCTCTCTCCCTCCCTTGATCTTCATTCTC
TGTTCTTCCGCTGCACTAACTATAACATGGTGGTTGCGCCATGTGTACCT
GCTTCCCCCTGCTCAGTGCTACGGGGCAGCTCATTTTGTCCAAGCTCACT
GGACCCCGACCCGGACCCACCCCTCTGCTTGGAGAGTAGTGCAGTGGCTC
ATCTGTTTATATAACCTACTTTTGCAGGGCCATCTGTTTACATAACCTAC
ATTGGACATGGACAGCCTAGGCTGGGGCATAGTGTCCCCGAAATCAGGTC
ATACAGTAAGAAACCTATTGTAGAAATTTCCTTATAACGTTAACGTTAAT
GAGGCCCTGATATGCATGATTTATGTCTGATAATGTTCACCTTTACTTAG
CTTCCTTATGCCACGAGAAAGAAATTCCCATCATTTACCAATATGGTATT
CTAGTATTTTCTAACAATTATGCAAATTAGTATGTAACTTAGGTAGCAAT
TTGCATTATTGACATCTATTGATACCTCTCTCTATTTCATGTCATATCTC
AGTTACATATGTCACCTGTTTGAGAGTCCCATTATGAAATGCAGCGGATT
CATAAACTTTCCTTACTAATTATAATTAGTATTTGACTATGTAAAGCACC
ATCTGAGCTATCTACATACCAAACATCACGACAATCTTTCGACCACTTCT
TACATTATTCATGTCCGAAGGTCAAAGCAAAAACACCCACTGCAGTTCTA
AACAAGCCGTTAGGGTGCCCGAATGTACACAACTTACTTCCTGTGGCATA
AACTATCTACCACACAAAAATCATGACTGTAGCACTTGCAGAAATTTGAC
CTCAAACTTTGACGCTCCGCTGCAGTACCTTGGGTACCCGCTAGGAGGCC
CATTATTGAACTCGGCCTTCCTTTCTGCGAATCCTACCCATCCACTAAAT
ATCATGCACAACCATCAACACTTCTCGAGTTATGCTGTACACAAACAAAC
AAACACACAAACAAACACAGCTCGCTGCAGTACTGTACGAAAATGCCAGG
TGAACCATCTTTGAACTTGATCTTCGGTCCCATAACCTCTACTCAAAAAT
TATGAAGATTCATCCACAGTCCGTTCAGATTTTTTGCCCACATAAAAACA
CGCAAACATACACAGTCTGCTACAGTACTGTAGGAAAACGCCAGGTGAAA
CATTTGTTAACTTGACCTCCATTTCCACAACCGCTACACACCTACCAAAT
ATCATGAGGATACGTTCAAAGTTTCATGAGTTATATGCTCTTGAACTACG
TTCAGATCCCCACAGTGTTTCACAGCCTTCAGTTCCGTAGTCACCGATGG
TGATGGCTGGGGGTGCTTCTACATCCTGGCCCAGCACTTCTGTCTTCTTC
AGCGGCTGATGATCAGACCAAAGTCATTGCAGCGCCCTGGAGAAGCGATC
CATCAAGGACTGTGGAGTCCCTGCTCTGTGTGAGCTGCAAGTCCGGCGTC
ATCAGCGAACAGTAGATCTCTGATCAAAGCTTCCTTTACCATTGTTTTGG
CCTTGAGGCGGTTGAGGTTGAAGAGTCTGCCGTCGGATCTTGTGCGGAGC
TGAGGTGAGATGCTGGAAGGTGTC Coding sequence (CDS) from alignment at xfSc0003388:51..1874- >transcript:BL69642_cuf0 ID=transcript:BL69642_cuf0|Name=transcript:BL69642_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=354bp|location=Sequence derived from alignment at xfSc0003388:51..1874- (Branchiostoma lanceolatum)
ATGTCCGAAGGTCAAAGCAAAAACACCCACTGCAGTTCTAAACAAGCCGT
TAGGGTGCCCGAATGTACACAACTTACTTCCTGTGGCATAAACTATCTAC
CACACAAAAATCATGACTGTAGCACTTGCAGAAATTTGACCTCAAACTTT
GACGCTCCGCTGCAGTACCTTGGGTACCCGCTAGGAGGCCCATTATTGAA
CTCGGCCTTCCTTTCTGCGAATCCTACCCATCCACTAAATATCATGCACA
ACCATCAACACTTCTCGAGTTATGCTGTACACAAACAAACAAACACACAA
ACAAACACAGCTCGCTGCAGTACTGTACGAAAATGCCAGGTGAACCATCT
TTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0003388 | genome | xfSc0003388:51..1874 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL69642_cuf0 |
| Biotype | protein_coding |
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