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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL69860_cuf0 >transcript:BL69860_cuf0-protein ID=transcript:BL69860_cuf0-protein|Name=transcript:BL69860_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=539bp
DDEGLKKRQRKEKQCAIHCCDETAELASLKDFDSWKTLLNAAVIRNHQGI
LEISKTVKEGEVPHVSYHRKCRSVFTLKRDLDKLSRSPVKVDEQDDTAIP
RSSVRQPQTPESRVYQKSCVFCEKSKYLKGSKTREALVQCADLRADHTIR
RAASDKNDVRILAVVARELVAAEAWYHRTCYRDYTRKVQVGVDNVGKREE
DERIQYHNAESEAFAMLYDYMRTDLLQSPRIVSMADLYTIFMSFMNTQGV
TEVKDSTRTHFKRKVEAKFSDALDFEDLSGNNKVFVIPRSLSRLDLAKFA
TENAKNETSKAALSLREAIQHQKGEESWPPKPSELTENAVSIPDNVKEFL
YTLLTGKTAFPGLQSCPEKVKRLLLSFGQDLVFAVSGGRQRPPKHILLPH
AVKSLTNNIKLIQILNRFGHGIAYSQLEEMNTALCLQKMATASCQDVPLP
ESIRPHICTTLAWDNIDRLEETLSGEGTSHRVNGIAVQANHLGPHPPPPS
TPPVSKSKRRSIESVGDVTAAHVFMSSGMYTTDVHMHGK Run BLAST on NCBI mRNA from alignment at Sc0000092:1066646..1068682+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL69860_cuf0 ID=transcript:BL69860_cuf0|Name=transcript:BL69860_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2037bp|location=Sequence derived from alignment at Sc0000092:1066646..1068682+ (Branchiostoma lanceolatum)
AGATGACGAAGGTTTGAAAAAACGACAACGCAAAGAAAAACAATGCGCCA
TACATTGTTGTGATGAAACGGCAGAGCTGGCCTCCTTAAAAGATTTCGAC
TCATGGAAAACACTCCTAAATGCAGCTGTTATTCGAAACCATCAGGGGAT
TCTTGAAATCTCAAAAACGGTGAAGGAAGGAGAAGTACCACATGTGTCAT
ACCACAGGAAATGTCGCAGTGTTTTCACACTGAAAAGGGACCTCGATAAA
CTTTCGCGATCTCCAGTCAAAGTCGACGAACAGGATGACACAGCCATCCC
TAGATCTTCAGTGCGACAACCCCAAACTCCTGAAAGTAGAGTCTACCAAA
AAAGTTGTGTATTTTGCGAAAAGTCAAAATACCTAAAAGGATCAAAAACC
AGAGAGGCACTTGTTCAATGCGCTGATTTGCGAGCTGACCACACAATTAG
AAGAGCCGCTTCAGATAAGAATGATGTTAGAATACTTGCAGTGGTTGCAA
GAGAACTCGTTGCGGCAGAAGCATGGTATCACAGAACGTGCTACCGCGAT
TACACTCGGAAAGTTCAAGTAGGTGTGGACAATGTTGGTAAGCGAGAAGA
AGATGAGAGGATTCAATATCACAATGCAGAATCAGAAGCCTTTGCAATGC
TCTACGACTATATGAGAACCGATTTGCTGCAGAGTCCAAGGATAGTCAGC
ATGGCTGATTTGTACACCATATTCATGTCATTCATGAATACACAAGGGGT
GACAGAGGTAAAGGACTCGACGAGGACACACTTTAAAAGAAAAGTGGAGG
CAAAATTCAGCGACGCATTGGACTTTGAAGATCTCTCTGGCAACAACAAA
GTGTTTGTTATCCCGCGAAGTCTTTCCAGGCTAGATTTAGCCAAGTTTGC
AACAGAGAACGCGAAAAACGAAACATCAAAAGCCGCCCTCAGCTTAAGGG
AAGCTATCCAGCACCAAAAGGGCGAAGAGTCATGGCCACCCAAACCTTCT
GAACTGACAGAAAATGCTGTGAGCATTCCGGATAATGTGAAAGAGTTCTT
ATACACTCTGCTGACAGGCAAAACGGCATTTCCGGGTCTGCAGTCTTGTC
CTGAAAAGGTTAAACGCCTTTTGCTGTCGTTCGGACAGGACTTGGTATTC
GCAGTGAGTGGCGGACGGCAGAGGCCCCCTAAGCACATTCTCCTCCCTCA
TGCTGTAAAATCTCTGACGAACAACATCAAACTCATTCAGATCTTAAACA
GATTCGGGCATGGAATTGCATATTCACAACTTGAGGAAATGAATACAGCA
CTGTGCCTGCAAAAGATGGCAACAGCCTCATGTCAAGATGTTCCACTACC
AGAAAGCATTCGCCCACACATCTGTACGACTTTAGCCTGGGACAACATAG
ATCGACTCGAGGAGACTTTATCTGGAGAAGGTACGTCCCACAGAGTGAAT
GGTATAGCTGTGCAAGCGAATCATCTTGGACCACACCCACCTCCACCTTC
AACACCACCCGTATCAAAATCAAAGAGGAGAAGCATCGAGTCAGTGGGGG
ATGTCACAGCTGCTCATGTGTTCATGTCCTCGGGCATGTACACTACCGAC
GTGCACATGCATGGCAAATAGCCTGAAGTGCACGGACATGTGCAAAGCTA
AAGATTGTAGTAACAGGAGAGATGAGGAAGACGAAGAAAATTTCGACAAT
GAGATATCAACAAATGATACCGATGACGATGGCGACGATTAGACGTAGTA
TAAACACTCAGGACGCAAGAGCTCTTCTTTCGGATGTATTAGCCAGCTAG
CGCTTTTGTTGAGAAGGTCCTAAGGCGTGTTAGTTAGTAATGATGTGTTC
TAAAAGTGTTTAGATTAACGACTATCAAGTAAAAAAATGCCATTTGTTCA
ACCTAGCCATCAGTTTCGAGTTTTTAAATGATACATTGTAGCATTAAGTT
CGAGGCTAATTCTCAAGTGATCTGCAAGTTGTCACGTGGTTCTCAAAAGT
GACAACACATAGCTTGCTTCAAGTAATTCAATCTGTA Coding sequence (CDS) from alignment at Sc0000092:1066646..1068682+ >transcript:BL69860_cuf0 ID=transcript:BL69860_cuf0|Name=transcript:BL69860_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1620bp|location=Sequence derived from alignment at Sc0000092:1066646..1068682+ (Branchiostoma lanceolatum)
GATGACGAAGGTTTGAAAAAACGACAACGCAAAGAAAAACAATGCGCCAT
ACATTGTTGTGATGAAACGGCAGAGCTGGCCTCCTTAAAAGATTTCGACT
CATGGAAAACACTCCTAAATGCAGCTGTTATTCGAAACCATCAGGGGATT
CTTGAAATCTCAAAAACGGTGAAGGAAGGAGAAGTACCACATGTGTCATA
CCACAGGAAATGTCGCAGTGTTTTCACACTGAAAAGGGACCTCGATAAAC
TTTCGCGATCTCCAGTCAAAGTCGACGAACAGGATGACACAGCCATCCCT
AGATCTTCAGTGCGACAACCCCAAACTCCTGAAAGTAGAGTCTACCAAAA
AAGTTGTGTATTTTGCGAAAAGTCAAAATACCTAAAAGGATCAAAAACCA
GAGAGGCACTTGTTCAATGCGCTGATTTGCGAGCTGACCACACAATTAGA
AGAGCCGCTTCAGATAAGAATGATGTTAGAATACTTGCAGTGGTTGCAAG
AGAACTCGTTGCGGCAGAAGCATGGTATCACAGAACGTGCTACCGCGATT
ACACTCGGAAAGTTCAAGTAGGTGTGGACAATGTTGGTAAGCGAGAAGAA
GATGAGAGGATTCAATATCACAATGCAGAATCAGAAGCCTTTGCAATGCT
CTACGACTATATGAGAACCGATTTGCTGCAGAGTCCAAGGATAGTCAGCA
TGGCTGATTTGTACACCATATTCATGTCATTCATGAATACACAAGGGGTG
ACAGAGGTAAAGGACTCGACGAGGACACACTTTAAAAGAAAAGTGGAGGC
AAAATTCAGCGACGCATTGGACTTTGAAGATCTCTCTGGCAACAACAAAG
TGTTTGTTATCCCGCGAAGTCTTTCCAGGCTAGATTTAGCCAAGTTTGCA
ACAGAGAACGCGAAAAACGAAACATCAAAAGCCGCCCTCAGCTTAAGGGA
AGCTATCCAGCACCAAAAGGGCGAAGAGTCATGGCCACCCAAACCTTCTG
AACTGACAGAAAATGCTGTGAGCATTCCGGATAATGTGAAAGAGTTCTTA
TACACTCTGCTGACAGGCAAAACGGCATTTCCGGGTCTGCAGTCTTGTCC
TGAAAAGGTTAAACGCCTTTTGCTGTCGTTCGGACAGGACTTGGTATTCG
CAGTGAGTGGCGGACGGCAGAGGCCCCCTAAGCACATTCTCCTCCCTCAT
GCTGTAAAATCTCTGACGAACAACATCAAACTCATTCAGATCTTAAACAG
ATTCGGGCATGGAATTGCATATTCACAACTTGAGGAAATGAATACAGCAC
TGTGCCTGCAAAAGATGGCAACAGCCTCATGTCAAGATGTTCCACTACCA
GAAAGCATTCGCCCACACATCTGTACGACTTTAGCCTGGGACAACATAGA
TCGACTCGAGGAGACTTTATCTGGAGAAGGTACGTCCCACAGAGTGAATG
GTATAGCTGTGCAAGCGAATCATCTTGGACCACACCCACCTCCACCTTCA
ACACCACCCGTATCAAAATCAAAGAGGAGAAGCATCGAGTCAGTGGGGGA
TGTCACAGCTGCTCATGTGTTCATGTCCTCGGGCATGTACACTACCGACG
TGCACATGCATGGCAAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000092 | genome | Sc0000092:1066646..1068682 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL69860_cuf0 |
| Biotype | protein_coding |
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