|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL69897_cuf0 >transcript:BL69897_cuf0-protein ID=transcript:BL69897_cuf0-protein|Name=transcript:BL69897_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=106bp
VNVTCQNGGTCIDGINDYTCNCTDGFEGDLCEINIDDCIGVTCQNGGTCI
DGINDYSCDCADGYDGDHCETEADECDPNPCQNGGTCTDLFNDFSCSCAT
GWEGDT Run BLAST on NCBI mRNA from alignment at Sc0000016:1662961..1664576- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL69897_cuf0 ID=transcript:BL69897_cuf0|Name=transcript:BL69897_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1616bp|location=Sequence derived from alignment at Sc0000016:1662961..1664576- (Branchiostoma lanceolatum)
GTGTTAATGTGACTTGTCAAAATGGAGGAACGTGCATCGACGGCATCAAC
GATTACACTTGCAATTGTACTGATGGCTTCGAAGGGGATCTCTGCGAAAT
AAGTAAGTTCTCCGTCCGTACTATCATATTATTACATATAGCATTTCTCA
TAAAAAGAAGAGAGTCGCGATGATGTCAAAATGCATTATTTATCGATAGT
TTAACCTTTTTAAAAGGATAGAGTCATTAGAGATTGCAAATTGGAGTACT
AATATTTTAACAAGGCCAACACGTGGGATCTATATTGATCTATTTGCCAT
ATGTTCTTTGATATTTGGCTTTGAAAGCTTTTTATTTATCAGTCACCATA
TTTGTACATCACCTGTTCTATGTGTTACACCGTATGTATATTTGTATTGT
TTTCAATGAAGATCTTTACAAATGAAAAAATCATCGATGGATGTCTTTGC
TTGCATGTACAGTTTCATACTGTGTAATTACCACAATGCTGTTATGTCTT
TGCAGATATAGACGATTGCATTGGTGTGACCTGTCAAAATGGCGGAACGT
GCATCGACGGAATCAACGATTATTCCTGCGACTGTGCTGATGGCTATGAT
GGCGATCATTGTGAAACAGGTAAGTTTGTTTGTTTGATTGTTTTCATGCT
TAACCGGGGGAAACCATGTCGCCTACAACACTTAGTTCTCCCGATGTAAT
TGCTTTGCACTATATTCCATTGACCAAAACGTTCTTGATAATGGGGAAGG
ATGGCGCCCATATGAAGTCAATGTTGAGAACGTTTATAGATTGCTAAATA
TTTATAATATCTACCCTAGGCAATAATTTGGGTTCAAAGTAGAAAACAGA
GACGAAATGGGGTAAATGTACATGCATTCAGCGAATGCTTTTCACAAAGA
CAAATAAGATGTTCACTCTTGGGGCCAACGCGAATGAACACTAGTGACCT
TTAATCAACCTCAACATACGGGTGATTCCAAACACTAAGCCATTAGATCG
TCATGAGATAGAAATATCGACATGTACTTGACAGGTTGATTTGTTGCAAA
GGCAGATGGCCTTAGCCTCCTTCTCAGACCTCCTAGAATTAACTCCCTTG
GCCAGTGTAAGAAATCGCGTCACCCCCAAATATATTCGCCGCCTTTCTAG
GAAGTCTGCGAAGGAGGATCACCTAGTGATGGAATGACACACTTTTTGAG
CGGGCTGTTGGGATCGTGATAGCTAAGCTGAATCTGAAGCTCCGCCCTGT
GGCCTTTGTCGCTGTTGGTGGAACGAGCAGCCGTTTTCTTTCTTTCCTTC
AGAGTTGGTTCAGGCAATAATTATATGGCAAATAGGAGCATTATAAACTT
GTAGCCTATTGTTCCCTCGTTGTTTACTTACCAACAACGATGCTATGAAA
TAGATTCATCATTTTTGTTGAGACTGAACAGTCAATATCATTTCTACGCT
GAATAGAAAAACGCGGCATTAACACAATCATTCACTGACGCCTTCAAACA
TGCATTGCAGAGGCTGACGAGTGCGACCCTAATCCGTGTCAAAATGGAGG
AACCTGCACCGACCTATTCAATGACTTCAGCTGCTCTTGTGCAACTGGCT
GGGAAGGAGATACATG Coding sequence (CDS) from alignment at Sc0000016:1662961..1664576- >transcript:BL69897_cuf0 ID=transcript:BL69897_cuf0|Name=transcript:BL69897_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=954bp|location=Sequence derived from alignment at Sc0000016:1662961..1664576- (Branchiostoma lanceolatum)
GTTAATGTGACTTGTCAAAATGGAGGAACGTGCATCGACGGCATCAACGA
TTACACTTGCAATTGTACTGATGGCTTCGAAGGGGATCTCTGCGAAATAA
ATATAGACGATTGCATTGGTGTGACCTGTCAAAATGGCGGAACGTGCATC
GACGGAATCAACGATTATTCCTGCGACTGTGCTGATGGCTATGATGGCGA
TCATTGTGAAACAGAGGCTGACGAGTGCGACCCTAATCCGTGTCAAAATG
GAGGAACCTGCACCGACCTATTCAATGACTTCAGCTGCTCTTGTGCAACT
GGCTGGGAAGGAGATACAGTTAATGTGACTTGTCAAAATGGAGGAACGTG
CATCGACGGCATCAACGATTACACTTGCAATTGTACTGATGGCTTCGAAG
GGGATCTCTGCGAAATAAATATAGACGATTGCATTGGTGTGACCTGTCAA
AATGGCGGAACGTGCATCGACGGAATCAACGATTATTCCTGCGACTGTGC
TGATGGCTATGATGGCGATCATTGTGAAACAGAGGCTGACGAGTGCGACC
CTAATCCGTGTCAAAATGGAGGAACCTGCACCGACCTATTCAATGACTTC
AGCTGCTCTTGTGCAACTGGCTGGGAAGGAGATACAGTTAATGTGACTTG
TCAAAATGGAGGAACGTGCATCGACGGCATCAACGATTACACTTGCAATT
GTACTGATGGCTTCGAAGGGGATCTCTGCGAAATAAATATAGACGATTGC
ATTGGTGTGACCTGTCAAAATGGCGGAACGTGCATCGACGGAATCAACGA
TTATTCCTGCGACTGTGCTGATGGCTATGATGGCGATCATTGTGAAACAG
AGGCTGACGAGTGCGACCCTAATCCGTGTCAAAATGGAGGAACCTGCACC
GACCTATTCAATGACTTCAGCTGCTCTTGTGCAACTGGCTGGGAAGGAGA
TACA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000016 | genome | Sc0000016:1662961..1664576 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL69897_cuf0 |
| Biotype | protein_coding |
|
