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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL70091_cuf0 >transcript:BL70091_cuf0-protein ID=transcript:BL70091_cuf0-protein|Name=transcript:BL70091_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=318bp
RKWLVKNHPSRRASQDCSTQDEAVSSFIAKNWHEILLAAEHKGVNAWQIM
GNFHKVLPIALELEHLNISQIEKFLADVAVLKGAVKQHNIDITFSEESLS
MDEFMYSRRFPHKVTVRDDVFMSRDVSNIPWATIPWYLKQGTINQTPVIV
TEVQESASGCYTEGQAFQITEFTGRLITIEPMVKANDDFVIKADLLEAVI
LRRDMLQEEQSLRNMDCQEHSYGEERVPLVSCLQCALSVSKVVVKEGEMD
NTWLKETGRCVIEIPKDGFCMAHACFVAISAVHDIHYVGGYIQLIEDAIE
ELKKEHRFYKLIGNFEED Run BLAST on NCBI mRNA from alignment at xfSc0000189:2860..4550+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL70091_cuf0 ID=transcript:BL70091_cuf0|Name=transcript:BL70091_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1691bp|location=Sequence derived from alignment at xfSc0000189:2860..4550+ (Branchiostoma lanceolatum)
CAGGAAATGGCTTGTCAAGAATCACCCTAGCCGTAGAGCTTCGCAAGATT
GCAGCACCCAGGACGAGGCAGTGAGTTCATTCATTGCCAAAAACTGGCAT
GAAATCTTACTGGCCGCAGAACACAAGGTCAGTTTTTTTTTCTGAAATGT
ATATGTTTGGCTTCCCTGCATGGCTACTTTCAGAAGTACTGTAGCAGAAC
TTCCAGCTTTGTCAACTTGTGTTCTGGACAAGCTATGGTCAATACTTTTG
GGTGGTAGAATAGCCGTGGATTACATTTTGAAAGTAGAACATGAAAAGTT
ACAGAATTGAATGTAATCTGTCTATTCAATATTCATTTTCTAATTGGTTC
AAAATCAATCAAGAGATACCCATCCCTACTCTGTGGGAATTCAATACACG
TATTTGTAAGCTAGTTAAAGTTGAACATCACCATACATAGATAAGGTAAA
ACGTACAAAAGCTCTCATTATTTGGTTGAGGAATAGGATTGCTGAACTCT
ATTTCTAGTACATTTGTAATGACAGCTATTGTTTGAAAAAATGACGGACC
TGCTGGGTTTAAGTGGAAAAAAGTCAAGTCTTTATTTACATTCAAATGCT
TGTTTGGACACACATGATGCTTTTCAACAAGGTCAGAATGTAACAGGTGT
TAGTATTGCACCATTGGAATGACAATGTGCATCAAAATATCATTTTAGCA
TGATGTTTATACAACATTTGTATTGATGTATTCTTTACTTCGTGTGCTTT
GAAGTCTAGTATTAATGCGCCTCAACATTCTATTTTGAATCCCAATTGTA
ATATATTGAGTTGCCTGTCACACATTTCTTGTACTTAATTAGCATATCTA
TCATATTTCAGGGTGTGAATGCATGGCAAATCATGGGAAACTTCCACAAA
GTACTTCCAATAGCACTGGAGTTGGAACATCTCAACATATCTCAGATTGA
GAAGTTCCTAGCTGATGTTGCAGTGCTCAAGGGAGCTGTGAAACAGCATA
ATATAGACATCACCTTCAGTGAAGAAAGCCTAAGTATGGATGAATTCATG
TATAGTAGGAGATTCCCACATAAAGTGACTGTTCGAGATGATGTTTTCAT
GTCCCGTGATGTGTCAAACATACCCTGGGCTACTATCCCTTGGTACCTGA
AACAAGGTACTATCAATCAGACGCCTGTTATTGTGACAGAGGTACAGGAA
AGTGCCTCTGGGTGCTATACAGAGGGGCAAGCATTCCAGATAACAGAGTT
TACTGGGCGCCTCATTACAATAGAACCTATGGTCAAAGCTAACGATGACT
TTGTCATCAAAGCAGATTTGTTGGAAGCTGTGATCTTAAGGAGAGACATG
CTTCAAGAGGAGCAAAGCCTTCGCAATATGGATTGCCAAGAACACTCATA
TGGAGAGGAACGTGTACCACTGGTGTCCTGTTTACAGTGTGCCCTATCAG
TCAGCAAAGTTGTTGTCAAGGAAGGAGAGATGGATAACACCTGGTTGAAG
GAAACTGGCAGATGTGTCATAGAAATCCCGAAGGATGGTTTCTGCATGGC
CCATGCTTGTTTTGTAGCAATTAGTGCTGTACATGATATCCACTATGTCG
GAGGTTATATTCAATTAATTGAAGATGCTATTGAAGAGTTGAAAAAAGAA
CATAGATTCTACAAGTTGATTGGTAATTTTGAGGAAGACCT Coding sequence (CDS) from alignment at xfSc0000189:2860..4550+ >transcript:BL70091_cuf0 ID=transcript:BL70091_cuf0|Name=transcript:BL70091_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1908bp|location=Sequence derived from alignment at xfSc0000189:2860..4550+ (Branchiostoma lanceolatum)
AGGAAATGGCTTGTCAAGAATCACCCTAGCCGTAGAGCTTCGCAAGATTG
CAGCACCCAGGACGAGGCAGTGAGTTCATTCATTGCCAAAAACTGGCATG
AAATCTTACTGGCCGCAGAACACAAGGGTGTGAATGCATGGCAAATCATG
GGAAACTTCCACAAAGTACTTCCAATAGCACTGGAGTTGGAACATCTCAA
CATATCTCAGATTGAGAAGTTCCTAGCTGATGTTGCAGTGCTCAAGGGAG
CTGTGAAACAGCATAATATAGACATCACCTTCAGTGAAGAAAGCCTAAGT
ATGGATGAATTCATGTATAGTAGGAGATTCCCACATAAAGTGACTGTTCG
AGATGATGTTTTCATGTCCCGTGATGTGTCAAACATACCCTGGGCTACTA
TCCCTTGGTACCTGAAACAAGGTACTATCAATCAGACGCCTGTTATTGTG
ACAGAGGTACAGGAAAGTGCCTCTGGGTGCTATACAGAGGGGCAAGCATT
CCAGATAACAGAGTTTACTGGGCGCCTCATTACAATAGAACCTATGGTCA
AAGCTAACGATGACTTTGTCATCAAAGCAGATTTGTTGGAAGCTGTGATC
TTAAGGAGAGACATGCTTCAAGAGGAGCAAAGCCTTCGCAATATGGATTG
CCAAGAACACTCATATGGAGAGGAACGTGTACCACTGGTGTCCTGTTTAC
AGTGTGCCCTATCAGTCAGCAAAGTTGTTGTCAAGGAAGGAGAGATGGAT
AACACCTGGTTGAAGGAAACTGGCAGATGTGTCATAGAAATCCCGAAGGA
TGGTTTCTGCATGGCCCATGCTTGTTTTGTAGCAATTAGTGCTGTACATG
ATATCCACTATGTCGGAGGTTATATTCAATTAATTGAAGATGCTATTGAA
GAGTTGAAAAAAGAACATAGATTCTACAAGTTGATTGGTAATTTTGAGGA
AGACAGGAAATGGCTTGTCAAGAATCACCCTAGCCGTAGAGCTTCGCAAG
ATTGCAGCACCCAGGACGAGGCAGTGAGTTCATTCATTGCCAAAAACTGG
CATGAAATCTTACTGGCCGCAGAACACAAGGGTGTGAATGCATGGCAAAT
CATGGGAAACTTCCACAAAGTACTTCCAATAGCACTGGAGTTGGAACATC
TCAACATATCTCAGATTGAGAAGTTCCTAGCTGATGTTGCAGTGCTCAAG
GGAGCTGTGAAACAGCATAATATAGACATCACCTTCAGTGAAGAAAGCCT
AAGTATGGATGAATTCATGTATAGTAGGAGATTCCCACATAAAGTGACTG
TTCGAGATGATGTTTTCATGTCCCGTGATGTGTCAAACATACCCTGGGCT
ACTATCCCTTGGTACCTGAAACAAGGTACTATCAATCAGACGCCTGTTAT
TGTGACAGAGGTACAGGAAAGTGCCTCTGGGTGCTATACAGAGGGGCAAG
CATTCCAGATAACAGAGTTTACTGGGCGCCTCATTACAATAGAACCTATG
GTCAAAGCTAACGATGACTTTGTCATCAAAGCAGATTTGTTGGAAGCTGT
GATCTTAAGGAGAGACATGCTTCAAGAGGAGCAAAGCCTTCGCAATATGG
ATTGCCAAGAACACTCATATGGAGAGGAACGTGTACCACTGGTGTCCTGT
TTACAGTGTGCCCTATCAGTCAGCAAAGTTGTTGTCAAGGAAGGAGAGAT
GGATAACACCTGGTTGAAGGAAACTGGCAGATGTGTCATAGAAATCCCGA
AGGATGGTTTCTGCATGGCCCATGCTTGTTTTGTAGCAATTAGTGCTGTA
CATGATATCCACTATGTCGGAGGTTATATTCAATTAATTGAAGATGCTAT
TGAAGAGTTGAAAAAAGAACATAGATTCTACAAGTTGATTGGTAATTTTG
AGGAAGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000189 | genome | xfSc0000189:2860..4550 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL70091_cuf0 |
| Biotype | protein_coding |
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