|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL70125_cuf0 >transcript:BL70125_cuf0-protein ID=transcript:BL70125_cuf0-protein|Name=transcript:BL70125_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=109bp
MKRTTGDISQGPVKKKRWDCLSEQEKRLLRCNRNKVNKIKKPGLHCDVIK
WMDEEAQRQGVTERGRHGFIVFDEMKIQERLQLRSDFEIVGLVDLGEFYQ
SMRSLQTGG Run BLAST on NCBI mRNA from alignment at xfSc0003140:4..1477+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL70125_cuf0 ID=transcript:BL70125_cuf0|Name=transcript:BL70125_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1474bp|location=Sequence derived from alignment at xfSc0003140:4..1477+ (Branchiostoma lanceolatum)
AATTAATTGTGCTCAAGTATGTTGTTGTTAGCCTGAGTGTCATCCTGTTT
AGTTTAGTTCCAGCATCAGGCCAGGCTCACCTAATTACTAAATTATACAT
GCATGGTTGGTGAAGAGTCTGATAGAGTTGGATAGAGTCAGGAACCAAAA
AGGATGACACTCAGGCTATGTTGTTGTTTAATGGCTTAACGTTATATATG
ATGGCTACAAGTTACTATTAAAGCCAATAAAGGTTCACAGGTAACGTTTC
TCCCCTTCATAATTTTTCTCATATTCTGTAAAACAGACACTGAGACAGTC
TTTATTTTAACCAAAAATGCGGCTTTCTATTTCTGTGTCTTCCTAGAAGA
GAAATCAGCCTGGATACCAGACCCCCAATCTTTAAGATATCTTTGGGGGT
TTGACGTCCAGGCTAAAGACTGAAAACAGCAAATCATTATTATTACATGA
TGTATCATTATCATACATCATGTATGAGCTCCTCTCAGCTAAGTGTGAAC
TAAACATACATGTAGTGAAACTGGACCTGGTAACACCTTAATTTACAGAG
AAATGTCTGTAATTCAGACTGATAAGAATATTATTGAGGTGCCTGTCTCT
TTTTTTTTCTTTACCGAGGTTGACAAAAGACCACATTACTAACATTATAT
TTATTCCATATTGGAGCATAGGTGGAAGGCCAAGGAATTTCTGTTGAATT
GCCTGAGCTGGTGCCAAATTTCTAATAAAAAAAACTGCACTCAGCAGTAA
AGCAGGGCCATTGGAGACAAGAGAAAATGAAGAGGACAACGGGTGACATC
TCTCAGGGCCCTGTAAAAAAGAAAAGATGGGACTGTCTGAGTGAACAAGA
GAAGAGGCTTCTACGATGCAACAGAAATAAAGTCAATAAGATTAAGAAGC
CTGGACTACACTGCGATGTTATCAAGTGGATGGATGAAGAAGCACAACGA
CAAGGTGTGACGGAAAGAGGGCGGCATGGATTTATTGTATTTGATGAGAT
GAAAATACAGGTAAGACTGTCTATTGTTTGAGTAAACATGATTATCAATA
TTTATAAGTTGTAATAATCATTAGAAACAACATGTGTAGCTTAGTGCCTA
AACAATTTGTTTAAAACTACTACTACTAGTACATGTATAGTACTTCTTCC
TACAACTTCTATTGTCCCTTGATTATTTAAGTTGAATACATGATGAAGGT
TTAATTTTTATGTAGAACTGTAGCATCAAAGGTCACATTTTGAAATGAAA
AGTATGAGGTTGTTGCCAAGCATCCAATAACTATGCTGGATGACCCAAGT
ATTATGTCAATATGCACAGAAACAATTTCTGTCTCCTTTGACACTGATTT
TTTAATGAATTTGTTTATTGCTTCTGCTAGGAAAGACTCCAGCTACGTTC
CGACTTTGAAATTGTAGGCCTTGTTGACTTGGGGGAGTTCTATCAGAGCA
TGCGGTCCCTTCAGACAGGCGGTA Coding sequence (CDS) from alignment at xfSc0003140:4..1477+ >transcript:BL70125_cuf0 ID=transcript:BL70125_cuf0|Name=transcript:BL70125_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=654bp|location=Sequence derived from alignment at xfSc0003140:4..1477+ (Branchiostoma lanceolatum)
ATGAAGAGGACAACGGGTGACATCTCTCAGGGCCCTGTAAAAAAGAAAAG
ATGGGACTGTCTGAGTGAACAAGAGAAGAGGCTTCTACGATGCAACAGAA
ATAAAGTCAATAAGATTAAGAAGCCTGGACTACACTGCGATGTTATCAAG
TGGATGGATGAAGAAGCACAACGACAAGGTGTGACGGAAAGAGGGCGGCA
TGGATTTATTGTATTTGATGAGATGAAAATACAGGAAAGACTCCAGCTAC
GTTCCGACTTTGAAATTGTAGGCCTTGTTGACTTGGGGGAGTTCTATCAG
AGCATGCGGTCCCTTCAGACAGGCGGTATGAAGAGGACAACGGGTGACAT
CTCTCAGGGCCCTGTAAAAAAGAAAAGATGGGACTGTCTGAGTGAACAAG
AGAAGAGGCTTCTACGATGCAACAGAAATAAAGTCAATAAGATTAAGAAG
CCTGGACTACACTGCGATGTTATCAAGTGGATGGATGAAGAAGCACAACG
ACAAGGTGTGACGGAAAGAGGGCGGCATGGATTTATTGTATTTGATGAGA
TGAAAATACAGGAAAGACTCCAGCTACGTTCCGACTTTGAAATTGTAGGC
CTTGTTGACTTGGGGGAGTTCTATCAGAGCATGCGGTCCCTTCAGACAGG
CGGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0003140 | genome | xfSc0003140:4..1477 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL70125_cuf0 |
| Biotype | protein_coding |
|
