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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL70209_cuf3 >transcript:BL70209_cuf3-protein ID=transcript:BL70209_cuf3-protein|Name=transcript:BL70209_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=113bp
MYFSNCSKSDFRRGQQLGEGEIDLGGNVFNKGMFEICCRQPVANLTDQQP
TIADLIPHLGVRLDVVGCWSARISTQHTRYQVPRFHRLCRGTSAALRSVH
MLSLSTYRYVLFN Run BLAST on NCBI mRNA from alignment at Sc0000032:1221312..1224225+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL70209_cuf3 ID=transcript:BL70209_cuf3|Name=transcript:BL70209_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=2914bp|location=Sequence derived from alignment at Sc0000032:1221312..1224225+ (Branchiostoma lanceolatum)
ATATTAAATGAGCCAGCAATAATTGTGACATTCTTGGGACTACAGTGGGC
AAAGTGGGCTTGGTCAGGCGGGCGGACTTAAGGATTGCCGCCGCCGGCTC
GCACAGTTGGGTTCGGTGGTGCGCAGCTCAGTACATTAGCCTGCTCGGAA
AGTATGTATAGGATACTCTGATGCGGATTTTATCCGACATAAAGGTAGGT
ATATTCAGTGTACTTAGACAATGTATTTTAGCAATTGTAGCAAGTCAGAT
TTCAGAAGGGGGCAACAACTGGGGGAGGGGGAAATCGACCTGGGGGGAAA
CGTCTTTAACAAAGGAATGTTTGAAATATGTTGCAGGCAACCAGTAGCCA
ACCTTACAGACCAGCAGCCAACCATAGCGGACCTAATTCCCCACTTAGGA
GTGAGGTTGGATGTGGTTGGCTGTTGGTCTGCCAGGATCTCAACCCAACA
TACCAGGTACCAGGTTCCCCGCTTCCATAGACTATGCAGAGGCACGTCAG
CTGCATTGAGAAGTGTACACATGCTTAGCCTTAGCACTTACCGGTATGTC
TTGTTCAATTGATTTTATCAATTGCTTTGATCAATTGATTTTATCAGTTG
ACTAGAAAGTGCATGTACTTGATGCTACAATGGTCCCCGGCCCTCAGGCA
TGAGGATGGGACTAGGTACGGTAAGATACTAGAAACTAAATGTATTTTTG
CTATAATGGTAAGATTCAGCTTAGCCCTCAACACGCCTACATCATGTTCT
ACTTGATCTTAGGACTGACAACATGGTTCATGTACATGCAGTTGTGTTTT
TGTCATGTGATCTTACAATATCCAAACTATTTAAAATATTTTCTCCAGGG
TCATGAAGGCCGGTCCCGCGGAGCCTTCCAAGAAAGGCTATAGAAGCCTG
GAACATGAAGCTAGGTGCAGGGGAAGACAAGCAGATGTTGGAAAGGGGAA
TGAGGGAAGTGATCAACCACCTGCTTCAACAACACTCCTGCATACAGCTT
GCTATCTGGGCAAGTGCGAAGAGAGGAGAAGTGGGCTGCTGGTCAATCGT
CTCCTCCAACTGGAAGCATGGCAGTCTGGCCAGTACATAGATGGAATACC
TGACATTCCAAGAATGTATCTGTCATCTTTAGGTATGCCAATGGCCCAAC
CAGTTTGTAGACATTCAGGAGGAACTATCGTCTGATGGTGATGACAGTAT
ATAGCTGTATTGGATATACATGTATGTGTATAATGCCAGTCCCACAATGA
AGACATTTCATTGTATAGTTTGTACATGTAAGTATACTAATGTGTTTTGC
TAATAACACCCTAGTACCCATTTCTTTGTTGAAGTTACATTGAAATGAGA
AGTAAGAGATTGTCATCATAGAGGAAGGACTGTCCATCAGTCTGTGCCAA
ATACATCATCATTTAGGCATGTGTTCCTGTTAGTTATACACCAGCAATGT
TAAACATGGATGGAATGGATATTGTTAGATGAATAGACATTGGAGGACAA
ACTGTGTACATGTACTCTTCAATTAAGGACACATTTTCTTACCCTGTATT
TTATCATATTTTGACTAGGAACAACAGCATACTTCCATGGTTGAGTTTCA
TATCCTTGTACACCAGCTATTCGGTTAAGCTGAACAGTACTGCAAGTCCA
AACATGCTATTTAGCTGCTATATGTTTTGTTTTATGTTATCAGCTAGCAG
GGTCCACTTTGCGATTGGAACATTATGGTGGCAAGTACTCGCAGTTCTTT
TTTTCAGGCCCAATTTTGTGTGACCTTTCCATCAAATCATTATACTGCTC
GGCACCTTTTCTTGGCACCTTTGCACCCTTTCCAAGAACCGGAATGTGGA
GTTAGTGTTAAGCAATACATTGTCCGAGGAGGAAAATTCAATTGATGAGG
AAAATTACGAAATAAATTAGAAAATGTGTCATTCAACTTTTGCCAATTTT
ATTTTCAAGGCAGGAAAGATAATGAGGGTGTTGATCTTTTACAATAAACT
GTATGTTGCATTTTAGTACTCTTACAAAGCAGCTTGTCTTCTCTAATGTG
TGTTCAAGAAGTGAATCATATATTTTGAAAATGTGCAATTTGTAAGTATT
TTTCATTTAGCCTAAGTCAGGAAGTACTTACATGTAGTATTACATTAGAC
CATGTTGCTTTGATTATACAGATTACATCCTCTGGGATACCCAAAACCGA
TGTGAACATGCGAATATGAACACAATATGAATGGTGGCTTGTAAAAATGT
TATCTTCAATACATGAATATCAAAGCTGAACAATTCCTTTTCAATCTATT
GTAAGTTGTCTTTCGTGTACATTGTACTTAAAGCCAGGATATAGTACAAA
ACCTGTTAATGTTGAAATTAGCCCGGAATGAACTTGAAATGAACTGTCTT
CACCTACATGCTGTACAAAATAAAATGTATATACCTAGCCTCACAATTGG
GATCTGTATTTTCAGTGATACATGCACAAGCTTATGGATCATTTTAAAAC
CTGAGACGCCATTTAATGTGCACCACTTCGTATAAAAGTTGTACCTTTAC
GTGTACATGTGTGTGCGGATAGTTGTTGTGATGATGAAGAAACAAGCCAC
TGATCAAAGGAGTGGTTGTATTTTATCAAACAATCGTTAACTAAAGTTCC
ATGATCTAATACCCTCACCAAGTAATGTTATCCCTTAAATAATACGCTGA
TAATACGGTACAAGATTTACTCCCTGTCTCAAGAGCTATCTGCCTCTAAA
ATCACGGCCATAGCATGTCCACGGCACGAGATATCAAACAAGATATGAAA
GTGTCGTTGCAGTACCCCGGAAACCCACTAGGACGCCTATTATCAAACCT
TCGTTTTCCAGATACTAGTATCTTCTGGAGTGACTTGGCAATCAAAAAGA
ATTAAGCAGCACCG Coding sequence (CDS) from alignment at Sc0000032:1221312..1224225+ >transcript:BL70209_cuf3 ID=transcript:BL70209_cuf3|Name=transcript:BL70209_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=342bp|location=Sequence derived from alignment at Sc0000032:1221312..1224225+ (Branchiostoma lanceolatum)
ATGTATTTTAGCAATTGTAGCAAGTCAGATTTCAGAAGGGGGCAACAACT
GGGGGAGGGGGAAATCGACCTGGGGGGAAACGTCTTTAACAAAGGAATGT
TTGAAATATGTTGCAGGCAACCAGTAGCCAACCTTACAGACCAGCAGCCA
ACCATAGCGGACCTAATTCCCCACTTAGGAGTGAGGTTGGATGTGGTTGG
CTGTTGGTCTGCCAGGATCTCAACCCAACATACCAGGTACCAGGTTCCCC
GCTTCCATAGACTATGCAGAGGCACGTCAGCTGCATTGAGAAGTGTACAC
ATGCTTAGCCTTAGCACTTACCGGTATGTCTTGTTCAATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000032 | genome | Sc0000032:1221312..1224225 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL70209_cuf3 |
| Biotype | protein_coding |
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