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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL71746_cuf0 >transcript:BL71746_cuf0-protein ID=transcript:BL71746_cuf0-protein|Name=transcript:BL71746_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=311bp
IATRMLTWIQSYLSGRKQRVAANGQFSSWKDVTSGVPQGGVLSPYLFLVY
MSSRTTKHATTTNIGYADDIGLSRCMPCVTAETDDTMQEEADHLDSWATQ
NNMVMNGDKSYELRICFSRIPPVLPPLILGGKEVPIVTCATYLGFKMTSN
LKWDSHISHATKKGSQRLHYLRLLAKGGMPPDDLTTVYTTLIRSVLEYAN
VVYAGCNKTQSKTLESVQKRASRIINGNGGIQTTAHLPALKSRRDEAALK
LFQQMQSEDHPLHYMTTSSRQQQTGRTLRNHNHRTLPTCRTERLKNSFLF
HATKLYNQSLS Run BLAST on NCBI mRNA from alignment at Sc0000739:44097..45322+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL71746_cuf0 ID=transcript:BL71746_cuf0|Name=transcript:BL71746_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1226bp|location=Sequence derived from alignment at Sc0000739:44097..45322+ (Branchiostoma lanceolatum)
AATCGCTACAAGAATGCTCACTTGGATTCAGAGTTACCTGTCTGGCAGGA
AACAACGTGTCGCTGCCAACGGTCAGTTTAGCAGCTGGAAAGATGTCACC
TCCGGAGTCCCACAGGGGGGAGTTCTGTCACCTTACTTATTCCTAGTATA
CATGTCCTCTCGAACTACCAAACACGCAACAACTACAAATATTGGATACG
CAGACGACATTGGACTGTCCAGATGCATGCCCTGTGTCACCGCGGAAACG
GACGATACTATGCAGGAGGAAGCCGATCACCTTGACTCATGGGCAACGCA
GAACAACATGGTCATGAACGGCGACAAGTCGTACGAACTCAGAATATGCT
TCTCCAGAATACCTCCAGTCCTTCCACCGCTCATACTGGGTGGGAAAGAA
GTACCTATTGTCACATGCGCCACCTACCTCGGATTCAAGATGACCTCTAA
CCTTAAGTGGGATAGCCATATTTCACATGCGACTAAAAAGGGATCACAAC
GTCTCCACTATCTTCGCCTACTTGCTAAAGGTGGTATGCCCCCAGACGAC
CTCACGACAGTGTACACAACCCTAATCAGATCCGTTCTGGAATATGCTAA
CGTGGTATACGCCGGATGTAACAAAACCCAGTCAAAAACACTCGAATCTG
TCCAGAAGAGAGCATCGAGGATTATCAACGGGAATGGAGGTATCCAGACG
ACAGCCCACCTGCCAGCGCTCAAGTCTAGACGTGACGAAGCAGCCTTAAA
ACTCTTTCAACAGATGCAATCTGAAGACCATCCCTTGCACTACATGACAA
CAAGCAGTCGGCAACAACAAACCGGCAGAACTCTCAGAAACCATAACCAT
AGAACTCTACCTACTTGTAGGACCGAACGGCTGAAGAACTCGTTTCTGTT
TCATGCCACAAAACTGTACAACCAGTCACTTTCGTGAACTTTTAAACGTG
TAATGTGGTAAAAACCATCGTTTTTAAATTGTATTGATCTTTAAATCGTC
CTAACATGTATATTTATGGCTATTTAAACTCGTCATTCCTGTCCGACGGT
TTATTCTTGATGCCACGCACACAAGCTTGCAATTATTTTATAGTTCAAGG
ACATTTTAGATCAAATTGAACTGTGACCTGTATTTTGTATAACTAGTGGA
ACCTACAATTGTTACTGTCAGAACAATTCAGGATATCCAGTAGGATATCC
TGCCAGTCTGCATATTTTGAATAAAG Coding sequence (CDS) from alignment at Sc0000739:44097..45322+ >transcript:BL71746_cuf0 ID=transcript:BL71746_cuf0|Name=transcript:BL71746_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=936bp|location=Sequence derived from alignment at Sc0000739:44097..45322+ (Branchiostoma lanceolatum)
ATCGCTACAAGAATGCTCACTTGGATTCAGAGTTACCTGTCTGGCAGGAA
ACAACGTGTCGCTGCCAACGGTCAGTTTAGCAGCTGGAAAGATGTCACCT
CCGGAGTCCCACAGGGGGGAGTTCTGTCACCTTACTTATTCCTAGTATAC
ATGTCCTCTCGAACTACCAAACACGCAACAACTACAAATATTGGATACGC
AGACGACATTGGACTGTCCAGATGCATGCCCTGTGTCACCGCGGAAACGG
ACGATACTATGCAGGAGGAAGCCGATCACCTTGACTCATGGGCAACGCAG
AACAACATGGTCATGAACGGCGACAAGTCGTACGAACTCAGAATATGCTT
CTCCAGAATACCTCCAGTCCTTCCACCGCTCATACTGGGTGGGAAAGAAG
TACCTATTGTCACATGCGCCACCTACCTCGGATTCAAGATGACCTCTAAC
CTTAAGTGGGATAGCCATATTTCACATGCGACTAAAAAGGGATCACAACG
TCTCCACTATCTTCGCCTACTTGCTAAAGGTGGTATGCCCCCAGACGACC
TCACGACAGTGTACACAACCCTAATCAGATCCGTTCTGGAATATGCTAAC
GTGGTATACGCCGGATGTAACAAAACCCAGTCAAAAACACTCGAATCTGT
CCAGAAGAGAGCATCGAGGATTATCAACGGGAATGGAGGTATCCAGACGA
CAGCCCACCTGCCAGCGCTCAAGTCTAGACGTGACGAAGCAGCCTTAAAA
CTCTTTCAACAGATGCAATCTGAAGACCATCCCTTGCACTACATGACAAC
AAGCAGTCGGCAACAACAAACCGGCAGAACTCTCAGAAACCATAACCATA
GAACTCTACCTACTTGTAGGACCGAACGGCTGAAGAACTCGTTTCTGTTT
CATGCCACAAAACTGTACAACCAGTCACTTTCGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000739 | genome | Sc0000739:44097..45322 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL71746_cuf0 |
| Biotype | protein_coding |
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