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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL71748_cuf0 >transcript:BL71748_cuf0-protein ID=transcript:BL71748_cuf0-protein|Name=transcript:BL71748_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=122bp
MAGSETEADPIFLSKDCLRTFSDLSSRDHLTRGLAMDSVASMYENWIKRH
HQTPTESAPSSDVHENGDVSQYSRHLTQHLSSLIRLSAQCPFHDVRDRAN
EILECVKVRESITPFLKAVSLF Run BLAST on NCBI mRNA from alignment at Sc0000739:27022..29362- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL71748_cuf0 ID=transcript:BL71748_cuf0|Name=transcript:BL71748_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2341bp|location=Sequence derived from alignment at Sc0000739:27022..29362- (Branchiostoma lanceolatum)
GCTAAAGGGCTTGGGCGCCCGATACACTAATAATTTGACGCTATAACGTT
ATAAGGCTACAGTCAAAATACGCCCTCCAAGAGTCGCCACGGCTACCGCC
CACCCCAACTTATCATTGAGAAGCCCGGTTAGAGAACGTCCGGCAGACAG
AAAGCGTGTACGATCTTCCAATCCCCACATCTGCTTGGACATTATGCGTT
GTCCGCCTGTGGATTTTGCACGATCGATTGTTAGTTTCGCGGGAGAATTC
ATTTCCGATGACATCATCCGCACGCAACCTGTGATTGGTCAGGTCTGGAG
GTGTGTACCTTACGTTTCCGATCTAATTTGCGTTGCCAATGAGGTAGGTA
GATTCTGAGACGGGGAGGTCTGTTCGTGTACTGGCACAGAAATCGTCATT
TTCGCACGGATTCCTCCCGAGTTCGGATCAGAATGGTGATTATCTGTGTC
TGAGAACACCTTCCAGACGACAGGACATCATTGGTTCGGCTCCCGGGGGT
GAGACGCTGAAGAAATCTGGCCGTTATCTCCGCGCGGGCTCGCTCTGTGG
AAATTCACTGGCGGCTGGTGGACTGACCCTTGACCTGCCAAGTCTCTTCC
GCTGTCCTGTTAGTTGGAGAAACCTTAACTTGCTCGGACGATTTTCCACG
GCTTTACACCCCAGATTTGTCATCTAACGCTGCCTATCCACGATCACATC
GATTCTGACTGGTTCAAGGACTCGCTAGACGCCGCATTAGCTGGTACGTG
CCCTTTCTGTTCCGTTTGTCTGGTTGTGAAGTCGCCACTTTTGAAATGTC
ATTCCAATCTGACAGGTGTCCTGACCAGTGACATGTACAAGATAGGCGAT
CTAGATGGCAGAATCTGTGAACATGAAGCAATATTTCACGAATAGTGGTG
TGTTTTTAGTACCGGGTCTTCAGCTATGACCTTTTAATATGCATGACATG
CCGGCTATTTTGTGCTGTATAACAGGTTAGTTCTGCTCTGCCGCCCTCCC
CCTTTTCGCGAAATTTCGTGCTATCTGTAACATTGTCTCCCATCGACCGT
TTATCGACTGTTTTTTAACGATCGCGCCATGAAATAGCTATTTCTATTCA
CCGCACATTGCAGATGAGGCGTTTCACGCCAATCACATGACATGTGTCCC
CACTCTTCTATGGATTAAAGTTTGTCTACTAACGGTGTTTGCCGTGACCT
GGGCCGTATCAAAGCTGCACATGTGTTACGGCATTGAGCCTGGTGTGGAA
TTACTAATGACTGGATACGTGGATGACAATGTAAAGCCTTGGGAAATCAG
TGTAACAGATATGGATTTGTTGGTTGGTTGGTTCAGATTTTCATTTTCTG
ATTTGAGAATACCATTTAAGCAACACAGAAAGGGTAGATTGGAGAAAGGG
TAGATATAAGGTTTTGTAATGATATTCTTCGCTCATGGTCCTAAACTATG
GCACTTCCGTAGGTGCAGGGTGAAGAATGCCAAAATCTGTCTGAATGTAC
AAAAATTATGATCTTGATTTTTTTTGACTGGGTATAGACATGGTACAACC
TAGTAAAAGACAACAAAAAAATACTAGAAAAATCTATCAGATGACACAAA
CCATTCAATGCACTATTTTGTAATTGTCAATAAGAAATGTTAATATTTCA
TAAAATTCTATTCATAACTTTATCAGCTAAGAATAGATAACCAACCAATA
AATGCTCGTAAAAGAGAGCCTCCCTGTCAAGTCTTGGTAAATGTACTAAA
AGACAAGCAGACATCTGGATGGTTCTTGACAATTGATGCTTGTGTTGTAA
TGTATCTGATGCTACTGTGTGTTTTTTGTCTCTTGCAGGTTAGCTAGGGA
AGAGCAGTTGGCACAGGGAATCGTGGGCAAGGGGTCCATTTTGCCAGTAG
TGGTTTGTGCTGCCCGTACATGGCCGGATCGGAGACGGAGGCTGACCCCA
TCTTTCTTAGTAAGGATTGCTTGCGGACCTTTTCCGACCTGTCGTCGCGT
GACCACCTCACACGTGGTTTGGCTATGGACAGTGTGGCGTCCATGTATGA
GAATTGGATCAAGCGACACCACCAAACACCAACAGAATCTGCTCCCTCCT
CGGACGTTCACGAAAATGGCGACGTTTCTCAGTACTCGCGGCACCTGACT
CAACACCTGTCCTCCCTCATAAGACTGTCCGCACAGTGTCCGTTCCACGA
TGTCCGCGACAGGGCAAACGAGATTCTGGAATGTGTCAAGGTGCGTGAAT
CTATTACGCCATTTTTAAAGGCAGTAAGTCTCTTTTGATTTTCCCTTTAT
CATTTGCATATCATGTCCTACATTTGCAACTGTATCTAGAG Coding sequence (CDS) from alignment at Sc0000739:27022..29362- >transcript:BL71748_cuf0 ID=transcript:BL71748_cuf0|Name=transcript:BL71748_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=369bp|location=Sequence derived from alignment at Sc0000739:27022..29362- (Branchiostoma lanceolatum)
ATGGCCGGATCGGAGACGGAGGCTGACCCCATCTTTCTTAGTAAGGATTG
CTTGCGGACCTTTTCCGACCTGTCGTCGCGTGACCACCTCACACGTGGTT
TGGCTATGGACAGTGTGGCGTCCATGTATGAGAATTGGATCAAGCGACAC
CACCAAACACCAACAGAATCTGCTCCCTCCTCGGACGTTCACGAAAATGG
CGACGTTTCTCAGTACTCGCGGCACCTGACTCAACACCTGTCCTCCCTCA
TAAGACTGTCCGCACAGTGTCCGTTCCACGATGTCCGCGACAGGGCAAAC
GAGATTCTGGAATGTGTCAAGGTGCGTGAATCTATTACGCCATTTTTAAA
GGCAGTAAGTCTCTTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000739 | genome | Sc0000739:27022..29362 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL71748_cuf0 |
| Biotype | protein_coding |
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