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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL71759_cuf0 >transcript:BL71759_cuf0-protein ID=transcript:BL71759_cuf0-protein|Name=transcript:BL71759_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=742bp
VTLNELHEVQEVKLKLEVEVKDLTAKLAEFDTLKRHANEIETKLRQTEQS
FREADSDRQKLKTENEKQTLELQQLSEKAATLEADRDGLIVEMRKLQREY
ENLKTAQSKLESNRDELKKLVVELENEVKRTKLELTHALASIRTQDANRE
KYKERYDLEMSKLRERVVQIEADLTKQRHEYTSLKATKAQLDTVYKTDKQ
KWKGQSEELQTKIEDLQSELGEVNTERTTLRSENRHLQETLSSKSLAWEK
ERNRLASAIQDLEKDRDNLEQQLDRTKAEYGALEQEKRGILSEKQHLEST
MEQMNKKVIILETEKLEFIERIDNLSEDLGVAKGNIGCLNEDIVSLKEVK
SVLETELRTFQQQLKALESDNARLSDELAETIKARDNLKADKEQLEALHK
SLDEDRNTEMVELQRYILALNEKVTELETESSTAVEVHTKLKDAYESLSE
QKQAADSKLSEIEAELKSKISLHEETLRDKGNLTNEVAKLHDQIELYQKM
ETEKGQLETEAELLRLKAFELEETKIQKSDLKTELERWKAKFDELQTVRL
SIQTETETMMMQVEEMNETIANLKAERDSLASENEALVSENTSLESKSKA
LKQTIEEMEVDISKLTERLAQTVAERGHIKAERDDFEVKTNTLSEDLTMV
RAEYDMLKGEKDILVKEKNQMQSSNSKMTLEQTHAQNTIQNLQTSLERYK
EHSKGQATKLKDRITQLDSELKTLRKDHSDLKAAKSELERVH Run BLAST on NCBI mRNA from alignment at xfSc0002438:2..2227- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL71759_cuf0 ID=transcript:BL71759_cuf0|Name=transcript:BL71759_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2226bp|location=Sequence derived from alignment at xfSc0002438:2..2227- (Branchiostoma lanceolatum)
GTAACGCTGAATGAATTGCATGAGGTGCAGGAAGTTAAGTTGAAACTGGA
GGTCGAAGTCAAGGACCTTACAGCAAAGCTAGCTGAGTTTGATACCTTGA
AAAGGCACGCCAATGAGATTGAAACAAAACTGAGGCAGACCGAACAGAGC
TTTAGGGAAGCAGACTCAGACAGGCAGAAACTGAAAACTGAAAACGAAAA
GCAGACTCTTGAGTTACAACAGCTGAGTGAGAAGGCAGCCACATTAGAAG
CAGATCGTGATGGTCTCATAGTAGAGATGAGAAAGTTACAAAGAGAATAT
GAGAATCTCAAAACTGCCCAATCAAAACTTGAGTCTAATCGAGATGAACT
AAAGAAGCTTGTAGTTGAATTAGAGAATGAAGTAAAGAGGACAAAGCTGG
AGCTGACTCACGCTCTTGCTAGTATAAGAACACAAGACGCTAACAGAGAA
AAGTACAAAGAACGTTATGATCTAGAGATGTCTAAACTTAGAGAGAGAGT
TGTTCAGATAGAGGCGGACCTTACAAAACAGAGACACGAATACACTAGTC
TAAAAGCAACGAAGGCACAGTTAGACACGGTTTACAAGACTGACAAGCAA
AAATGGAAAGGGCAATCAGAGGAACTGCAAACAAAGATTGAGGATTTGCA
GTCAGAACTTGGTGAAGTTAATACAGAAAGAACAACTTTGAGGTCTGAGA
ACAGACATCTACAGGAGACACTGTCCTCTAAGAGCTTGGCATGGGAGAAG
GAAAGGAATAGATTAGCAAGTGCCATCCAGGATTTAGAAAAGGATAGAGA
CAATCTCGAACAACAGCTAGACAGGACTAAGGCAGAGTATGGAGCTCTAG
AGCAGGAAAAGAGAGGCATTTTGTCTGAAAAACAACACCTGGAGAGTACG
ATGGAGCAGATGAATAAGAAAGTCATCATACTAGAAACAGAAAAGCTAGA
ATTCATAGAAAGGATAGACAACTTAAGCGAAGACTTGGGTGTAGCGAAGG
GCAACATTGGCTGCCTAAATGAGGACATAGTGAGCCTCAAAGAGGTCAAA
AGTGTCTTAGAAACAGAGCTGAGAACATTTCAACAACAGTTGAAAGCCTT
AGAAAGTGACAACGCACGACTTAGCGATGAGTTAGCGGAAACTATCAAGG
CGCGTGATAACTTAAAGGCAGACAAGGAACAACTAGAGGCCTTGCACAAA
TCGCTTGACGAGGACAGGAATACAGAAATGGTAGAATTACAAAGATACAT
ATTGGCACTTAATGAGAAAGTAACTGAACTAGAAACAGAGAGCAGCACTG
CAGTTGAAGTACACACTAAACTGAAAGATGCGTATGAAAGCCTTTCAGAA
CAAAAGCAAGCAGCTGATTCTAAGCTGTCAGAAATTGAAGCAGAGCTGAA
ATCAAAGATTAGCCTTCATGAAGAAACACTTAGAGACAAAGGCAATCTAA
CAAATGAAGTAGCGAAGCTCCATGACCAGATCGAGCTATATCAGAAGATG
GAGACAGAAAAGGGTCAGTTGGAAACAGAAGCAGAACTGTTAAGACTGAA
GGCTTTCGAACTAGAAGAGACAAAGATTCAGAAATCTGATTTGAAAACGG
AGCTAGAGAGATGGAAAGCTAAATTTGATGAATTACAGACAGTACGGTTA
AGCATACAGACTGAGACAGAGACCATGATGATGCAAGTTGAAGAGATGAA
TGAGACAATAGCCAATTTGAAAGCAGAAAGAGACTCATTGGCGAGTGAAA
ACGAGGCACTTGTTTCAGAGAACACAAGTCTGGAATCTAAAAGCAAAGCA
CTTAAACAAACAATAGAGGAGATGGAAGTTGACATAAGTAAGCTGACCGA
ACGATTAGCACAGACTGTAGCGGAGCGTGGACATATCAAGGCTGAGAGAG
ATGACTTCGAAGTTAAAACTAATACTCTATCAGAAGACTTGACTATGGTA
AGGGCCGAGTATGACATGCTTAAAGGAGAAAAAGACATTTTAGTGAAGGA
AAAGAATCAAATGCAGTCTAGCAATTCAAAAATGACCCTAGAGCAGACCC
ACGCTCAGAATACTATTCAGAACCTACAAACCAGCTTGGAGAGGTATAAG
GAGCACAGTAAAGGGCAGGCGACCAAGCTGAAAGACAGAATAACTCAGCT
TGACTCAGAACTTAAAACATTGAGAAAAGACCATTCCGATCTCAAAGCGG
CGAAAAGTGAGCTGGAAAGGGTCCAC Coding sequence (CDS) from alignment at xfSc0002438:2..2227- >transcript:BL71759_cuf0 ID=transcript:BL71759_cuf0|Name=transcript:BL71759_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2226bp|location=Sequence derived from alignment at xfSc0002438:2..2227- (Branchiostoma lanceolatum)
GTAACGCTGAATGAATTGCATGAGGTGCAGGAAGTTAAGTTGAAACTGGA
GGTCGAAGTCAAGGACCTTACAGCAAAGCTAGCTGAGTTTGATACCTTGA
AAAGGCACGCCAATGAGATTGAAACAAAACTGAGGCAGACCGAACAGAGC
TTTAGGGAAGCAGACTCAGACAGGCAGAAACTGAAAACTGAAAACGAAAA
GCAGACTCTTGAGTTACAACAGCTGAGTGAGAAGGCAGCCACATTAGAAG
CAGATCGTGATGGTCTCATAGTAGAGATGAGAAAGTTACAAAGAGAATAT
GAGAATCTCAAAACTGCCCAATCAAAACTTGAGTCTAATCGAGATGAACT
AAAGAAGCTTGTAGTTGAATTAGAGAATGAAGTAAAGAGGACAAAGCTGG
AGCTGACTCACGCTCTTGCTAGTATAAGAACACAAGACGCTAACAGAGAA
AAGTACAAAGAACGTTATGATCTAGAGATGTCTAAACTTAGAGAGAGAGT
TGTTCAGATAGAGGCGGACCTTACAAAACAGAGACACGAATACACTAGTC
TAAAAGCAACGAAGGCACAGTTAGACACGGTTTACAAGACTGACAAGCAA
AAATGGAAAGGGCAATCAGAGGAACTGCAAACAAAGATTGAGGATTTGCA
GTCAGAACTTGGTGAAGTTAATACAGAAAGAACAACTTTGAGGTCTGAGA
ACAGACATCTACAGGAGACACTGTCCTCTAAGAGCTTGGCATGGGAGAAG
GAAAGGAATAGATTAGCAAGTGCCATCCAGGATTTAGAAAAGGATAGAGA
CAATCTCGAACAACAGCTAGACAGGACTAAGGCAGAGTATGGAGCTCTAG
AGCAGGAAAAGAGAGGCATTTTGTCTGAAAAACAACACCTGGAGAGTACG
ATGGAGCAGATGAATAAGAAAGTCATCATACTAGAAACAGAAAAGCTAGA
ATTCATAGAAAGGATAGACAACTTAAGCGAAGACTTGGGTGTAGCGAAGG
GCAACATTGGCTGCCTAAATGAGGACATAGTGAGCCTCAAAGAGGTCAAA
AGTGTCTTAGAAACAGAGCTGAGAACATTTCAACAACAGTTGAAAGCCTT
AGAAAGTGACAACGCACGACTTAGCGATGAGTTAGCGGAAACTATCAAGG
CGCGTGATAACTTAAAGGCAGACAAGGAACAACTAGAGGCCTTGCACAAA
TCGCTTGACGAGGACAGGAATACAGAAATGGTAGAATTACAAAGATACAT
ATTGGCACTTAATGAGAAAGTAACTGAACTAGAAACAGAGAGCAGCACTG
CAGTTGAAGTACACACTAAACTGAAAGATGCGTATGAAAGCCTTTCAGAA
CAAAAGCAAGCAGCTGATTCTAAGCTGTCAGAAATTGAAGCAGAGCTGAA
ATCAAAGATTAGCCTTCATGAAGAAACACTTAGAGACAAAGGCAATCTAA
CAAATGAAGTAGCGAAGCTCCATGACCAGATCGAGCTATATCAGAAGATG
GAGACAGAAAAGGGTCAGTTGGAAACAGAAGCAGAACTGTTAAGACTGAA
GGCTTTCGAACTAGAAGAGACAAAGATTCAGAAATCTGATTTGAAAACGG
AGCTAGAGAGATGGAAAGCTAAATTTGATGAATTACAGACAGTACGGTTA
AGCATACAGACTGAGACAGAGACCATGATGATGCAAGTTGAAGAGATGAA
TGAGACAATAGCCAATTTGAAAGCAGAAAGAGACTCATTGGCGAGTGAAA
ACGAGGCACTTGTTTCAGAGAACACAAGTCTGGAATCTAAAAGCAAAGCA
CTTAAACAAACAATAGAGGAGATGGAAGTTGACATAAGTAAGCTGACCGA
ACGATTAGCACAGACTGTAGCGGAGCGTGGACATATCAAGGCTGAGAGAG
ATGACTTCGAAGTTAAAACTAATACTCTATCAGAAGACTTGACTATGGTA
AGGGCCGAGTATGACATGCTTAAAGGAGAAAAAGACATTTTAGTGAAGGA
AAAGAATCAAATGCAGTCTAGCAATTCAAAAATGACCCTAGAGCAGACCC
ACGCTCAGAATACTATTCAGAACCTACAAACCAGCTTGGAGAGGTATAAG
GAGCACAGTAAAGGGCAGGCGACCAAGCTGAAAGACAGAATAACTCAGCT
TGACTCAGAACTTAAAACATTGAGAAAAGACCATTCCGATCTCAAAGCGG
CGAAAAGTGAGCTGGAAAGGGTCCAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0002438 | genome | xfSc0002438:2..2227 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL71759_cuf0 |
| Biotype | protein_coding |
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