|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL71900_cuf0 >transcript:BL71900_cuf0-protein ID=transcript:BL71900_cuf0-protein|Name=transcript:BL71900_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=336bp
LPVLSGVPQGSILGPFLFLLFVNDLPDCVEFGKMAMFADDAKCLRRITSI
FDCFKFQSDLDRLVAWGKTWEMVFHPSKCSVVSMTRKTSPVEYPYSMSDS
VLSRQDSYNDLGVHVQHNLSWNSHVLKKISTCNSRLAMIKRSVGFNAPFT
VKLNLYRSLVIPHLDYCSQVWAPHTRLYQRKVEGVQRRATKYICNDYELN
YKDRLTHTNLLPLCYRRELFDILFLFKCFRNVYCTNISHVLNVSRPTRSL
RSTDQFQLVPRPCKTESFSFSYFSRIAVIWNNLPLDIRQHMYSNLTLQSV
KKLLISYYRSRLSDTFSVDNLCTWTTTCRCSSCIVT Run BLAST on NCBI mRNA from alignment at Sc0000055:666598..667815- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL71900_cuf0 ID=transcript:BL71900_cuf0|Name=transcript:BL71900_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1218bp|location=Sequence derived from alignment at Sc0000055:666598..667815- (Branchiostoma lanceolatum)
CTTACCTGTGTTGTCAGGTGTCCCCCAGGGATCCATTTTAGGGCCATTCT
TGTTTTTATTATTCGTTAATGATTTACCTGACTGTGTTGAATTTGGTAAA
ATGGCCATGTTTGCAGATGACGCTAAATGTTTGAGAAGAATTACCTCGAT
TTTTGATTGTTTTAAATTTCAGTCCGACTTAGATCGTCTTGTGGCTTGGG
GGAAAACCTGGGAGATGGTATTTCATCCATCTAAGTGTTCAGTTGTTAGT
ATGACACGTAAAACTTCACCTGTTGAATACCCTTATAGCATGTCAGATTC
TGTACTCAGTCGACAAGATAGTTATAATGACTTAGGAGTTCATGTACAAC
ATAACTTATCCTGGAATTCTCATGTACTTAAGAAGATATCAACATGTAAC
TCAAGACTTGCAATGATCAAGAGATCAGTAGGCTTTAATGCCCCATTTAC
TGTTAAACTCAATTTGTATCGATCACTGGTGATACCACATTTAGACTACT
GTTCTCAGGTATGGGCACCGCATACAAGATTGTATCAGCGCAAAGTAGAA
GGTGTTCAAAGACGTGCTACCAAGTACATCTGTAATGATTACGAACTTAA
CTATAAGGACAGATTAACCCATACCAACCTTCTACCATTGTGTTACAGAC
GAGAACTTTTTGATATCTTATTTCTTTTCAAATGTTTCCGCAACGTGTAC
TGTACCAACATTTCTCATGTCCTCAATGTATCCAGACCTACTAGATCACT
TCGCTCTACAGACCAATTCCAACTTGTACCACGGCCATGTAAAACTGAAT
CATTCTCATTCTCTTACTTTAGTCGTATTGCCGTCATCTGGAACAATTTA
CCACTAGACATTCGCCAACATATGTACTCAAACCTCACTCTACAGTCCGT
TAAAAAACTCTTGATTTCATATTATAGATCCCGATTAAGTGACACATTTT
CTGTTGATAACTTATGTACTTGGACGACCACTTGTCGTTGCTCATCTTGC
ATAGTGACATAGCTTAACCGTTTACCCTGTTTTCCTTATCATTTGACCTT
ATTACTCTCATTTTTTTAATGTACTTCTTTCAGTATTTGATGTCTTTCAT
TTATTGTTTTTATCTCAACTTTGTAAATCTTCTGGGGGAGTCGGCCTCGT
AGAGGAACTAGATTCCTGTTGCCGGCTCCCCTCAGATTGTACGCAATCTG
TGAATTTGAATAAATAAA Coding sequence (CDS) from alignment at Sc0000055:666598..667815- >transcript:BL71900_cuf0 ID=transcript:BL71900_cuf0|Name=transcript:BL71900_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1011bp|location=Sequence derived from alignment at Sc0000055:666598..667815- (Branchiostoma lanceolatum)
TTACCTGTGTTGTCAGGTGTCCCCCAGGGATCCATTTTAGGGCCATTCTT
GTTTTTATTATTCGTTAATGATTTACCTGACTGTGTTGAATTTGGTAAAA
TGGCCATGTTTGCAGATGACGCTAAATGTTTGAGAAGAATTACCTCGATT
TTTGATTGTTTTAAATTTCAGTCCGACTTAGATCGTCTTGTGGCTTGGGG
GAAAACCTGGGAGATGGTATTTCATCCATCTAAGTGTTCAGTTGTTAGTA
TGACACGTAAAACTTCACCTGTTGAATACCCTTATAGCATGTCAGATTCT
GTACTCAGTCGACAAGATAGTTATAATGACTTAGGAGTTCATGTACAACA
TAACTTATCCTGGAATTCTCATGTACTTAAGAAGATATCAACATGTAACT
CAAGACTTGCAATGATCAAGAGATCAGTAGGCTTTAATGCCCCATTTACT
GTTAAACTCAATTTGTATCGATCACTGGTGATACCACATTTAGACTACTG
TTCTCAGGTATGGGCACCGCATACAAGATTGTATCAGCGCAAAGTAGAAG
GTGTTCAAAGACGTGCTACCAAGTACATCTGTAATGATTACGAACTTAAC
TATAAGGACAGATTAACCCATACCAACCTTCTACCATTGTGTTACAGACG
AGAACTTTTTGATATCTTATTTCTTTTCAAATGTTTCCGCAACGTGTACT
GTACCAACATTTCTCATGTCCTCAATGTATCCAGACCTACTAGATCACTT
CGCTCTACAGACCAATTCCAACTTGTACCACGGCCATGTAAAACTGAATC
ATTCTCATTCTCTTACTTTAGTCGTATTGCCGTCATCTGGAACAATTTAC
CACTAGACATTCGCCAACATATGTACTCAAACCTCACTCTACAGTCCGTT
AAAAAACTCTTGATTTCATATTATAGATCCCGATTAAGTGACACATTTTC
TGTTGATAACTTATGTACTTGGACGACCACTTGTCGTTGCTCATCTTGCA
TAGTGACATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000055 | genome | Sc0000055:666598..667815 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL71900_cuf0 |
| Biotype | protein_coding |
|
