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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72060_cuf0 >transcript:BL72060_cuf0-protein ID=transcript:BL72060_cuf0-protein|Name=transcript:BL72060_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=356bp
FGMTSNLSGGRAEPQPPLQTHAGQLVAWIPAPLNLTVRSGAAIRKQSNVN
ANSAGVQVRQTEGHDVAHNASTSPTDDSCLRTIAEKSYNGEECDFSTSVR
ISLNTHKAIRAKPFMCGECEYRTARKAHLTKHMIKHTGEKPFMCEKCGFR
TACSFYLSCHMITHTDERPYKCGQCDYAAKLKSSLGRHVAHKHTNEKPYK
CRECDYRTAYKSSLTIHMANHTGEKPYKCDHCGYAAVRKRDFDRHMAIHT
GEKPYKCKECRYRTADWSGLSRHMKQHTGERPYKCDQCDYSATQKGGLDS
HMVKHTGKRPYMCEKCGYMTAYRSELSKHMRKHTGCVVTRKKLHKCDQCD
YSSAQK Run BLAST on NCBI mRNA from alignment at Sc0000004:6018806..6020622+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72060_cuf0 ID=transcript:BL72060_cuf0|Name=transcript:BL72060_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1817bp|location=Sequence derived from alignment at Sc0000004:6018806..6020622+ (Branchiostoma lanceolatum)
GTTCGGTATGACTTCCAACCTTTCTGGGGGTAGAGCCGAACCGCAGCCAC
CTCTACAGACTCATGCAGGACAGTTGGTAGCCTGGATACCGGCCCCGTTA
AATTTAACAGTTCGCAGTGGAGCAGCCATTAGGAAGCAAAGCAACGTTAA
CGCTAACAGTGCTGGCGTCCAGGTTAGACAGACGGAGGGGCATGATGTAG
CACATAACGCGAGTACATCCCCTACAGATGATTCTTGTTTACGCACGATT
GCAGAAAAGTCATACAATGGTGAAGAGTGCGACTTTTCTACATCGGTTAG
AATAAGTTTAAACACACACAAAGCAATTCGCGCAAAACCCTTCATGTGTG
GGGAGTGCGAGTACAGGACAGCTCGCAAGGCTCACCTAACCAAACACATG
ATAAAGCATACCGGTGAGAAACCCTTCATGTGTGAGAAGTGCGGGTTCAG
GACGGCTTGTAGTTTCTATCTCTCCTGTCATATGATAACGCACACCGATG
AGAGACCCTACAAATGTGGCCAGTGCGACTACGCTGCTAAACTTAAAAGC
AGTTTAGGCCGCCACGTGGCTCATAAACACACCAACGAGAAACCCTACAA
GTGTCGGGAGTGTGATTACAGGACGGCCTACAAGTCAAGCCTAACCATAC
ACATGGCAAACCATACTGGTGAGAAACCCTACAAATGTGACCATTGTGGC
TACGCTGCTGTACGGAAAAGGGATTTCGATCGACACATGGCTATACACAC
TGGTGAGAAACCCTACAAGTGTAAGGAGTGCCGATACAGGACGGCTGACT
GGTCTGGCCTATCCAGACATATGAAGCAACATACGGGTGAAAGACCCTAC
AAATGTGACCAGTGTGACTATTCTGCTACACAGAAAGGTGGCTTGGACAG
CCATATGGTCAAACACACTGGTAAGAGACCTTACATGTGTGAGAAATGCG
GGTACATGACTGCTTACAGGTCTGAACTATCCAAACACATGAGAAAACAT
ACAGGATGTGTTGTAACACGCAAGAAACTCCACAAATGTGACCAGTGCGA
CTATTCGTCTGCACAGAAATAGCGACGCATACTGGTCAATGCGACTTGTG
GGAGTTTTCCTATGTGTGGAAAAATAGTTTAGCTCCACACGTGGCCAGAC
ACACTGGCGAGAAACCTTACGTATGTGAGGAGTGCGAGTACAGGACGGCA
GGAAAGGTAAATTGAGGAAACAAACAGGGAGAAATCCTGCAAATGTGACC
TATGTGACTATTATGCTACACACAGAAACAGTCTAAAACTGCAAAAGAAG
AAATACACAAGTTAGACATCCTGCATGTGTTGGGAGTGCGAGTACAAGTC
AACTGGCTTTTCTGTCTTAACGCTGAAGAAACAATCGTAGGTGTAAATTC
CTCTCCACTCCTCTCAGTGTATTAGAGCAGTTTCCATCTCGGTGTGATCA
GTGTGATTTCGACTGTCACTCTTCGTGAAAAATGAAGTTCGACCAAAACA
CAAACCGCACTAACGGCAAAATCGACATGGCTTAACTAAGATTGTTGCCA
AGATATGTACTCATTAGATTAACACCCATGCGGGTTTCTTAGCAACATTG
TAGACAATAGCAATAGTTCGTATGCATGCTGATATCAATGTGAGTTTTTG
CTAATGTTGTACGCTATTCTGTCGGCTATATGTGTGATGGAACGCTAAAG
TAGTGGCGTAATAATATGTCCGATGCCCGAAAAAAAGAACACGACTTCAC
ATAATGTAGCAATGTTGCTGCAAGGATAATGGAAAGTGTCGCTACGAGGC
GTTTGAGAGCGAAGGAC Coding sequence (CDS) from alignment at Sc0000004:6018806..6020622+ >transcript:BL72060_cuf0 ID=transcript:BL72060_cuf0|Name=transcript:BL72060_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1071bp|location=Sequence derived from alignment at Sc0000004:6018806..6020622+ (Branchiostoma lanceolatum)
TTCGGTATGACTTCCAACCTTTCTGGGGGTAGAGCCGAACCGCAGCCACC
TCTACAGACTCATGCAGGACAGTTGGTAGCCTGGATACCGGCCCCGTTAA
ATTTAACAGTTCGCAGTGGAGCAGCCATTAGGAAGCAAAGCAACGTTAAC
GCTAACAGTGCTGGCGTCCAGGTTAGACAGACGGAGGGGCATGATGTAGC
ACATAACGCGAGTACATCCCCTACAGATGATTCTTGTTTACGCACGATTG
CAGAAAAGTCATACAATGGTGAAGAGTGCGACTTTTCTACATCGGTTAGA
ATAAGTTTAAACACACACAAAGCAATTCGCGCAAAACCCTTCATGTGTGG
GGAGTGCGAGTACAGGACAGCTCGCAAGGCTCACCTAACCAAACACATGA
TAAAGCATACCGGTGAGAAACCCTTCATGTGTGAGAAGTGCGGGTTCAGG
ACGGCTTGTAGTTTCTATCTCTCCTGTCATATGATAACGCACACCGATGA
GAGACCCTACAAATGTGGCCAGTGCGACTACGCTGCTAAACTTAAAAGCA
GTTTAGGCCGCCACGTGGCTCATAAACACACCAACGAGAAACCCTACAAG
TGTCGGGAGTGTGATTACAGGACGGCCTACAAGTCAAGCCTAACCATACA
CATGGCAAACCATACTGGTGAGAAACCCTACAAATGTGACCATTGTGGCT
ACGCTGCTGTACGGAAAAGGGATTTCGATCGACACATGGCTATACACACT
GGTGAGAAACCCTACAAGTGTAAGGAGTGCCGATACAGGACGGCTGACTG
GTCTGGCCTATCCAGACATATGAAGCAACATACGGGTGAAAGACCCTACA
AATGTGACCAGTGTGACTATTCTGCTACACAGAAAGGTGGCTTGGACAGC
CATATGGTCAAACACACTGGTAAGAGACCTTACATGTGTGAGAAATGCGG
GTACATGACTGCTTACAGGTCTGAACTATCCAAACACATGAGAAAACATA
CAGGATGTGTTGTAACACGCAAGAAACTCCACAAATGTGACCAGTGCGAC
TATTCGTCTGCACAGAAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:6018806..6020622 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72060_cuf0 |
| Biotype | protein_coding |
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