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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72118_cuf0 >transcript:BL72118_cuf0-protein ID=transcript:BL72118_cuf0-protein|Name=transcript:BL72118_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=238bp
MDRARKTRARVSAKTGWTEAYLRAQIKEKNFMNELDLSNKSLDEIPPAVF
CIKEVEILDVSDNPLGSIPVNIASLSNLKEMRVAGCPITEINGTVSDCEY
LSKIDFSRNPSMASVTLPATMMRLRYLEYVALCNCNLKSLPRNLTLLATV
ETLDLSQNALTTLPADISGLKQLKVLILTANAFQSMPEPIVSLGCLEILE
MKQNKLKNRQRDLLLNAPRKLKILDMEDNSSLCFLPEV Run BLAST on NCBI mRNA from alignment at Sc0000167:138150..140399+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72118_cuf0 ID=transcript:BL72118_cuf0|Name=transcript:BL72118_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2250bp|location=Sequence derived from alignment at Sc0000167:138150..140399+ (Branchiostoma lanceolatum)
TGTACGTGTATTTGTTGCTTTGCTTCCCTCTGACGTGTTTATCCTGACCA
TTTTGCAACCTGGCTTGATGCTCGTTTGTCCGGCTGTCAGCTACCAGTGG
TGACATCTCCAGCTAGATCTGCCTTGCCAGATTGATCGACAGCTTTCATA
CGTTTCAGCAAAGAGTGGGAAAAGGTTTGCACGTGGCTTATTGTATTATC
TTCATGCTCAATGAGATCGTATAATATTGTGCTAATGAATGGGTACCTTT
GCGACGGGCATGTCTTCACTTTCGGCATACAACTCGGGTTGCAATAAAAA
CTCATTTTGCCAGTTGGATACGGTCTTTGCAACCGTTAGATCTGCCTGGA
GATTAGTGCTTGTCGCACTGGAGTGTATGTCTCATTTCGTACGAGATGTT
TAATTAAATCGGTCCTGCAAATAGCCGAAACTCATTTAAACCACGATAAG
CCACTCGTCGAAGTGCCATTAAGGCATCAGACTTCCTTGTTAACACATGT
TAGGGTATCAGAGATAGATTGCATGGCATGTTAACGGTGTGTGGGGATTA
TATAGATCGCTGCTTGATGTTACTCTGTAATGGGAATTAACAGTATGTAT
GCCATGTACAATGTTCTTTGTTTTACGCTCTTTACATTGATTTGTTTTGA
GCTGGCAAAGGTAAAAGTATTTCTAAAAGTATATAGTTTTGCCCGTCGTA
GTACTTTTCATTGAATGCATAAAGCTTAAGGTGTCATTACGGTTACCTTT
ACTGATGATTGACATTTTACAATATGATTTGTATTACTTTCTGTGCCTGT
CATCAAATTGTCGCTCATTGTCTTAGTGCGGAGGAACGTTAAGTTAAAAA
CATTTAAAAATTGATTATTAAATAAAACGTCGGTTTGGTATGTCTGTCAA
GTTTTGCCCTTATACTCTCCCGTTTGCAAACGAGTCCTTCATTGTAGAAT
CATCACAGTTGACTTGTTTGGTTGGTTAGATTTGGTTGGTTGCATAGCGA
CTGAACTATGAATATGTCGGCTCGTTGCTCAACTACGCCGAACTTATCTT
TGACCTTTTGAATCTGGCCTCAATCGGGTTATATATCTCTCGCTATCGTA
AACCCATTTAATTAGTTTGGCGCCAGTTGACAGCCAGCGGTGACAAATGA
TTTCTGAGCTATGGCAGAGAGAAGCAACAAAGGCATCAAATAGCTCAGTA
CAATGCTGTATCACATAGTAACTAGATTGTGAGAGGGGCGTATTCTTTAC
CCAAGGTGCTAACGGCCAATAGCTAAGCGTAAAAGATATAAGAAAATGTC
TTATATTTTGCCTCCGTGTTTGCGCCTTAGCCTAACATCTCTCGGGAAAG
AGACCCTCAGGTATGATGCTAGCACAGTCGTGCATTTTTTTCAGAAAAAT
TATTTCAAAAGAAAAGTGTGATAAGCGATTACATTGGTACCTTCCCCAAA
ATAACGGTTAAGAATTTATGGAGAGTATAATATAAAAGTATGTAATTTTG
TATCAATCTGATAACACAGAACTACGGCGCCAAAGATGGATCGCGCTCGA
AAAACGAGAGCACGAGTATCAGCAAAGACGGGTTGGACAGAGGCATACCT
AAGGGCCCAAATCAAGGAGAAAAACTTCATGAACGAACTAGATCTCTCGA
ACAAGTCTTTGGATGAAATACCACCAGCTGTCTTCTGTATCAAAGAGGTT
GAAATCTTGGACGTTTCTGACAACCCCCTTGGTTCTATACCGGTTAACAT
CGCGAGTCTTTCCAACCTGAAAGAGATGAGAGTGGCCGGTTGTCCCATCA
CAGAAATCAACGGTACCGTTTCAGATTGCGAGTATCTGAGTAAAATTGAC
TTTTCACGGAATCCGTCAATGGCTTCAGTAACTCTTCCAGCAACAATGAT
GCGACTGAGGTACCTTGAATACGTTGCTTTGTGCAATTGTAACCTTAAAT
CGCTTCCCCGCAATCTGACTCTCCTGGCCACAGTTGAAACCCTTGATCTG
TCCCAAAATGCGCTAACAACTTTGCCGGCTGACATTTCAGGACTGAAGCA
ACTTAAAGTCCTGATCCTCACAGCTAACGCCTTTCAAAGTATGCCGGAAC
CAATCGTGTCACTCGGATGTCTCGAAATCCTGGAAATGAAACAAAACAAA
CTGAAAAACCGACAGCGTGACTTATTGCTGAACGCCCCTCGAAAGTTAAA
GATCTTGGATATGGAGGACAACAGCTCCTTATGCTTTCTACCAGAAGTAC
Coding sequence (CDS) from alignment at Sc0000167:138150..140399+ >transcript:BL72118_cuf0 ID=transcript:BL72118_cuf0|Name=transcript:BL72118_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=714bp|location=Sequence derived from alignment at Sc0000167:138150..140399+ (Branchiostoma lanceolatum)
ATGGATCGCGCTCGAAAAACGAGAGCACGAGTATCAGCAAAGACGGGTTG
GACAGAGGCATACCTAAGGGCCCAAATCAAGGAGAAAAACTTCATGAACG
AACTAGATCTCTCGAACAAGTCTTTGGATGAAATACCACCAGCTGTCTTC
TGTATCAAAGAGGTTGAAATCTTGGACGTTTCTGACAACCCCCTTGGTTC
TATACCGGTTAACATCGCGAGTCTTTCCAACCTGAAAGAGATGAGAGTGG
CCGGTTGTCCCATCACAGAAATCAACGGTACCGTTTCAGATTGCGAGTAT
CTGAGTAAAATTGACTTTTCACGGAATCCGTCAATGGCTTCAGTAACTCT
TCCAGCAACAATGATGCGACTGAGGTACCTTGAATACGTTGCTTTGTGCA
ATTGTAACCTTAAATCGCTTCCCCGCAATCTGACTCTCCTGGCCACAGTT
GAAACCCTTGATCTGTCCCAAAATGCGCTAACAACTTTGCCGGCTGACAT
TTCAGGACTGAAGCAACTTAAAGTCCTGATCCTCACAGCTAACGCCTTTC
AAAGTATGCCGGAACCAATCGTGTCACTCGGATGTCTCGAAATCCTGGAA
ATGAAACAAAACAAACTGAAAAACCGACAGCGTGACTTATTGCTGAACGC
CCCTCGAAAGTTAAAGATCTTGGATATGGAGGACAACAGCTCCTTATGCT
TTCTACCAGAAGTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000167 | genome | Sc0000167:138150..140399 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72118_cuf0 |
| Biotype | protein_coding |
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