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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72127_cuf0 >transcript:BL72127_cuf0-protein ID=transcript:BL72127_cuf0-protein|Name=transcript:BL72127_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=372bp
MAASGVLRYSLDFLRSLRRSMPPVDPWASKTIKDRLQLNGLLWRSRPRGR
KAGRGRARKISTIVGHRPPSGSFICKFSQQFRQQQQTCRNAGASNLVSVP
LQPPKQRTSTGLPSVYMCNARSLMNKLDEFELTVHQYKADIAIVTETWFS
TAMPSEFLNIDNYTLFSTSRTERRGGGVAIYIHENVQARPISQVQVPTEL
ECVWVWVRPKRLPRQVPAIAVCATYIPPNSKHQQLLIEHLVNTVDLLKTH
NPDVGLILAGDYNRLDHRPLVLSHRLEQVVSAPTRGDATLDVIVTNLKSF
YLTPVVTNPIGTSDHKAVWWQPRVRSQMPNKTKQVVVRXLWGGSGNSARA
FDLLGHDQRCRDTKQRLLEVCR Run BLAST on NCBI mRNA from alignment at Sc0000068:1411884..1414183- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72127_cuf0 ID=transcript:BL72127_cuf0|Name=transcript:BL72127_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2300bp|location=Sequence derived from alignment at Sc0000068:1411884..1414183- (Branchiostoma lanceolatum)
GCTCCTGTAGCGGGCAGCCGCGGTTTTGTACCTCTCCCCTACAGGAGTGC
TTTTGGTGTCTTCAACCAACGTTTTTTATGGGATTGTGCAATATAGATGT
TTTTATGTGTTACGTGAACGTGCAAGGACTGTCCAGAAGCGAAACCTGAC
GTTTTCCACTGGATTATTGACGTGTAACCGAGGATCTCCGACGCGGTCTG
TGCCAAGCTGGGATAATGGCGGCCTCTGGCGTCCTCCGATACTCCCTGGA
TTTCCTTAGAAGCTTGCGACGTTCTATGCCCCCTGTGGATCCATGGGCAA
GCAAGACTATCAAGGACAGACTCCAACTCAATGGATTACTGTGGAGAAGC
AGACCTCGAGGGAGAAAAGCTGGAAGAGGTAGGGCTCGCAAGATCTCTAC
CATAGTCGGCCATCGCCCTCCCTCTGGTTCCTTCATATGCAAATTTTCCC
AGCAATTTCGTCAACAACAACAGACATGCAGGAATGCAGGTGCCAGTAAC
CTAGTTAGCGTACCTCTACAGCCACCGAAACAAAGGACCTCTACAGGTCT
TCCGTCTGTCTACATGTGCAACGCTCGCTCGCTGATGAACAAACTAGACG
AGTTTGAACTTACAGTACATCAGTACAAGGCTGACATTGCCATCGTGACG
GAGACCTGGTTTTCCACCGCAATGCCTAGTGAGTTCCTGAACATTGACAA
TTACACGCTCTTTTCTACAAGCAGAACGGAGCGACGAGGAGGTGGAGTTG
CTATCTACATCCACGAGAATGTACAGGCAAGACCGATCTCTCAAGTCCAA
GTACCAACAGAACTTGAGTGTGTGTGGGTGTGGGTCCGTCCCAAGCGACT
CCCACGTCAGGTGCCAGCTATTGCAGTGTGTGCTACCTACATCCCGCCCA
ACTCTAAGCATCAACAACTCCTCATTGAACATCTTGTCAACACAGTCGAC
CTTCTGAAAACACACAACCCAGACGTTGGTCTAATACTTGCCGGCGACTA
CAATCGTCTCGACCACAGGCCCCTCGTCCTGTCACACCGACTGGAACAGG
TGGTCAGCGCCCCTACCCGTGGGGACGCCACGTTGGACGTCATAGTCACC
AACCTCAAGTCCTTCTACCTAACCCCTGTGGTCACGAACCCGATAGGAAC
TAGTGACCACAAAGCTGTCTGGTGGCAGCCAAGAGTCCGGTCACAGATGC
CAAACAAAACAAAGCAGGTCGTCGTTCGTCNCCTGTGGGGTGGCTCAGGG
AACTCTGCTAGGGCCTTTGATCTTCTTGGCCATGATCAACGATGCCGGGA
CACTAAACAGCGACTACTGGAAGTATGTCGATGATCTAAACCTGGGGGAA
ATCCGACCGGTCTACTCACCTTCAACCATGCAGAACAACTTACACGAGTT
AGACAACTGGTCAGAGAGAAACCATATGCTGCTGAATCCCAAGAAGTGCA
AAGTTCTACAGTTTTGCTTCATGCAACGACCCCCACCTCCCCCAGTCCTT
ACACTGGGAGGCCAAGCACTCACTGTAGTAACACAAGCCAGACTTCTCGG
ACTTCAGATCCAGTCCGACCTGGGATGGGACTCACAAGTGGACAGTATGG
TATCAAAGGGGAGCAAGCGCCTCTTTCTGCTGTGCCGATTGCGCCGAGCT
GGCCTTCCGACAGAGGACCTGACGGCCATCTATTGCGGGTATGTTCGACC
GCTCCTTGAGTATGCAGCCCCAGTTTGGAACGCCGCCCTCAACAACAGCC
AAATCAACAGACTGGAACGCGTTCAGAAACGTGCCTGTAAGATCATATTG
GGTCGCCAGTATACCTCGTATACGGACACACTGAGAGGATTAAATCTGCA
AACTCTTTCTGACCGCAGACACGACCTCTGCGTGAACTTTGCAAACAAAG
TGAGACAATCGCCACGTTTCTGTTCCTGGCTACCTCCGACTCGAGGTGAA
CAGCACAGCAGACTGCTGAGGAACTCACTCCAGTACTCTCAAGCCAGAGG
TACTAAACGTTACACCACGAGTGCCAAACCTGCGCTGGCGCAACTCCTTG
GCGGACAAAAACTCTGATCTGTTACTCCGGCTGGACATTAACCTTGCTTT
TAGTAGTAATGTCGAACTGAAATCTAGCTTTTAATTGTATTAGTCAACGA
TCATTTGGACATATGAACTTTTATCGTCTGTTGTACATAGTACTCTGATC
GTGTCGACTTTACTGTATATGTGATTGTAAGCTGCGGCGCAATTCAGTAT
CTATACTGCAATGCCGTTTGTTCTCATGTGTTTTTTTATCAATAAACCAT
Coding sequence (CDS) from alignment at Sc0000068:1411884..1414183- >transcript:BL72127_cuf0 ID=transcript:BL72127_cuf0|Name=transcript:BL72127_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1119bp|location=Sequence derived from alignment at Sc0000068:1411884..1414183- (Branchiostoma lanceolatum)
ATGGCGGCCTCTGGCGTCCTCCGATACTCCCTGGATTTCCTTAGAAGCTT
GCGACGTTCTATGCCCCCTGTGGATCCATGGGCAAGCAAGACTATCAAGG
ACAGACTCCAACTCAATGGATTACTGTGGAGAAGCAGACCTCGAGGGAGA
AAAGCTGGAAGAGGTAGGGCTCGCAAGATCTCTACCATAGTCGGCCATCG
CCCTCCCTCTGGTTCCTTCATATGCAAATTTTCCCAGCAATTTCGTCAAC
AACAACAGACATGCAGGAATGCAGGTGCCAGTAACCTAGTTAGCGTACCT
CTACAGCCACCGAAACAAAGGACCTCTACAGGTCTTCCGTCTGTCTACAT
GTGCAACGCTCGCTCGCTGATGAACAAACTAGACGAGTTTGAACTTACAG
TACATCAGTACAAGGCTGACATTGCCATCGTGACGGAGACCTGGTTTTCC
ACCGCAATGCCTAGTGAGTTCCTGAACATTGACAATTACACGCTCTTTTC
TACAAGCAGAACGGAGCGACGAGGAGGTGGAGTTGCTATCTACATCCACG
AGAATGTACAGGCAAGACCGATCTCTCAAGTCCAAGTACCAACAGAACTT
GAGTGTGTGTGGGTGTGGGTCCGTCCCAAGCGACTCCCACGTCAGGTGCC
AGCTATTGCAGTGTGTGCTACCTACATCCCGCCCAACTCTAAGCATCAAC
AACTCCTCATTGAACATCTTGTCAACACAGTCGACCTTCTGAAAACACAC
AACCCAGACGTTGGTCTAATACTTGCCGGCGACTACAATCGTCTCGACCA
CAGGCCCCTCGTCCTGTCACACCGACTGGAACAGGTGGTCAGCGCCCCTA
CCCGTGGGGACGCCACGTTGGACGTCATAGTCACCAACCTCAAGTCCTTC
TACCTAACCCCTGTGGTCACGAACCCGATAGGAACTAGTGACCACAAAGC
TGTCTGGTGGCAGCCAAGAGTCCGGTCACAGATGCCAAACAAAACAAAGC
AGGTCGTCGTTCGTCNCCTGTGGGGTGGCTCAGGGAACTCTGCTAGGGCC
TTTGATCTTCTTGGCCATGATCAACGATGCCGGGACACTAAACAGCGACT
ACTGGAAGTATGTCGATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000068 | genome | Sc0000068:1411884..1414183 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72127_cuf0 |
| Biotype | protein_coding |
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