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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72206_cuf1 >transcript:BL72206_cuf1-protein ID=transcript:BL72206_cuf1-protein|Name=transcript:BL72206_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=282bp
MSLRRSLDTLKKHIEDRNIPQDFAENQIIETLRSWCFNMARVAPDGNCMF
AAVTQSIKSQMHNLKGTAFYNTLMNLGIDPDSVEEAVIAQRLRALVVQEF
LDNHQEYINPFPSQAAYFEIIEQFCHSGVYNLDIGGVALLALANVLQNAI
TVFSNIQGMPVISITPTSSPSHTVPAIYIVYDQNNLHYDAAIPSDSPGEN
IVQKEVTPVASNALKRSDHASTKPTASPFSCTCGKKMIKKRGQSKMRCNS
IKYARFKNNMACTVTCHCKQCSNNKPPVPPKR Run BLAST on NCBI mRNA from alignment at Sc0000190:353042..355185- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72206_cuf1 ID=transcript:BL72206_cuf1|Name=transcript:BL72206_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2144bp|location=Sequence derived from alignment at Sc0000190:353042..355185- (Branchiostoma lanceolatum)
AGACAAATAGAATCAGACTGCCTTTCGTATATCCCGGTGCATGCACACAT
GTACAGGTAAGAATGAGAGATTTCACAGATCGCTGAAAAAGCATGGAATC
CTCCGTGCGCCAACCGTGGGAGTGGCTATCGTGAAAGCAGCAATATCGAG
CTGCTTCCATAATATCAACACAAAGAGGCGTAAGAAAGACCTGCTGTCCA
CACCAACTTCCATATCCCACGCCGACGGAAACGATCAGCAAACAGAGAAA
GGTTTGAGTTATTCCCAACAGCTGTTCCCTCAATGAATAATTCATTAATT
GCTCCCAAGTCAAAAACTGTATGTGCGTAAACTGTGTCACGTAGCCTCCA
CCCGGCTGTTTTCTTTTTCATGTTACCGCTCTCTTGCCGATCTGCTATTA
GAGAAAGTATGTAATATGAAAACGGTAACTCGACAAAGAAAGCAAATGAA
GGTAGTCTGCAACGCAAAAATTATGTAACAGCTGAGGCATAGTCAAACGT
TTCTAGATCGCGTTAATTTAGACACGAGAAAAACAATATCCGACTCCTGC
CATACCTACTGAATTGGGAGTGGCATGATGAAATCAAACGATGTTAAATG
TCCTTAGGTGTGCAGACTGCAGGGCAAAGAGGACAGCAAGAAGGACATGG
TGACCGTGCAGTAATAACTGTAAAGCAGGGCGATCAAGTGATGCTCTTCC
AATCTTTAGGTAAGTCTTAAATGTATTTCGGAAATGTTCAAGCGCATATC
TTGAAAATGGCACCAAATTGTGGTTAAAACTACAGAATTGATGCCCAAGG
ATTTTTTTTTGTTACAGAACAGTTATTCAGTAGTAGATCAATAATGAAGT
AACTAACAGAAATATGGAACACACGTTTGTCTTTCAGCGCGATATTTCAG
TTCATCCATCATATGACACAAGTTCCATAGTAAATCCTTGTTGGTGATAT
TTATCTTTTAGAACCGATAGAAATTATGTTTACACAGATTTAAACACTTT
ATCTCACAAAGATTCACATGATTAATTAGTTTGCTGACTTTGTCTGTTCT
ATTACTGTCTATGATTCATTAATTTCTATGATTCTTTCTGGAACTTCACA
TCTAATTGAATATACCTGCCAATAATACACAGGTTCAACATCTCATTATT
CATCATCTTTGGAACCAAGCATCATTGTACCAACTAAGGTGTCGTCAGAA
GAACAGCTAATGCGGGAAGCAGAAGCGGAACTGGATAGACTACTTGAAAC
ATCCGTGACAGTTGGTAACGACCATGGCGATAATAGCACACTGATAGATG
AGTCTAAGACGTTCTTTGGACACGTTAAAAAAACACATTGAAGACAGAAA
CATTCCACAAGACTTTGCTGAAAACCAAATCATTGAAACATTGAGATCAT
GGTGTTTCAACATGGCACGTGTGGCTCCAGATGGAAATTGCATGTTTGCG
GCAGTAACACAATCCATCAAAAGCCAGATGCATAATCTTAAGGGCACTGC
ATTTTACAATACCCTCATGAATCTTGGTATCGACCCAGATTCAGTAGAAG
AAGCTGTTATAGCACAGCGATTAAGAGCCTTGGTTGTTCAAGAGTTTCTG
GATAATCATCAAGAATACATAAACCCTTTCCCATCTCAAGCGGCATACTT
TGAAATTATAGAACAATTTTGTCACAGTGGAGTTTACAATCTCGACATAG
GGGGCGTTGCTCTGTTAGCGTTGGCAAATGTGTTACAAAACGCTATTACA
GTCTTCTCAAACATCCAAGGCATGCCTGTAATCAGCATCACACCTACATC
AAGTCCATCACACACTGTTCCAGCAATATACATTGTGTATGATCAAAACA
ACTTACACTATGATGCGGCTATTCCATCAGATAGTCCAGGGGAGAATATT
GTGCAGAAAGAGGTCACGCCAGTTGCGTCCAATGCACTTAAACGCAGTGA
TCATGCCTCAACCAAACCTACTGCCAGTCCATTCTCTTGCACATGCGGGA
AAAAAATGATTAAAAAAAGGGGTCAGAGCAAAATGCGCTGTAATAGTATT
AAATACGCACGTTTCAAGAACAACATGGCCTGTACTGTTACTTGTCATTG
CAAACAATGCAGCAATAACAAACCCCCTGTACCTCCCAAACGCA Coding sequence (CDS) from alignment at Sc0000190:353042..355185- >transcript:BL72206_cuf1 ID=transcript:BL72206_cuf1|Name=transcript:BL72206_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=846bp|location=Sequence derived from alignment at Sc0000190:353042..355185- (Branchiostoma lanceolatum)
ATGAGTCTAAGACGTTCTTTGGACACGTTAAAAAAACACATTGAAGACAG
AAACATTCCACAAGACTTTGCTGAAAACCAAATCATTGAAACATTGAGAT
CATGGTGTTTCAACATGGCACGTGTGGCTCCAGATGGAAATTGCATGTTT
GCGGCAGTAACACAATCCATCAAAAGCCAGATGCATAATCTTAAGGGCAC
TGCATTTTACAATACCCTCATGAATCTTGGTATCGACCCAGATTCAGTAG
AAGAAGCTGTTATAGCACAGCGATTAAGAGCCTTGGTTGTTCAAGAGTTT
CTGGATAATCATCAAGAATACATAAACCCTTTCCCATCTCAAGCGGCATA
CTTTGAAATTATAGAACAATTTTGTCACAGTGGAGTTTACAATCTCGACA
TAGGGGGCGTTGCTCTGTTAGCGTTGGCAAATGTGTTACAAAACGCTATT
ACAGTCTTCTCAAACATCCAAGGCATGCCTGTAATCAGCATCACACCTAC
ATCAAGTCCATCACACACTGTTCCAGCAATATACATTGTGTATGATCAAA
ACAACTTACACTATGATGCGGCTATTCCATCAGATAGTCCAGGGGAGAAT
ATTGTGCAGAAAGAGGTCACGCCAGTTGCGTCCAATGCACTTAAACGCAG
TGATCATGCCTCAACCAAACCTACTGCCAGTCCATTCTCTTGCACATGCG
GGAAAAAAATGATTAAAAAAAGGGGTCAGAGCAAAATGCGCTGTAATAGT
ATTAAATACGCACGTTTCAAGAACAACATGGCCTGTACTGTTACTTGTCA
TTGCAAACAATGCAGCAATAACAAACCCCCTGTACCTCCCAAACGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000190 | genome | Sc0000190:353042..355185 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72206_cuf1 |
| Biotype | protein_coding |
|
