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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72535_cuf0 >transcript:BL72535_cuf0-protein ID=transcript:BL72535_cuf0-protein|Name=transcript:BL72535_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=202bp
DMCIFALKEIISYFKRRGSPVFVCFLDASKAFDRVNHYTLFKKLIDRNVP
VYLVRIIVHWFSMLTFRVRWGSTVSDNFSCSNGVPQGSLLSPMLFNVCAS
DLSVKLNAANAGCFMGKVAVNHLFYADDLCLICPSAKAVQKLINVCEAYG
ADSDIIFCAKKTNCMYFPCNRSALNVTPPSVKLYGKPLPYVPLATSLTLV
SS Run BLAST on NCBI mRNA from alignment at Sc0000120:250503..251889+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72535_cuf0 ID=transcript:BL72535_cuf0|Name=transcript:BL72535_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1387bp|location=Sequence derived from alignment at Sc0000120:250503..251889+ (Branchiostoma lanceolatum)
CCGACATGTGTATCTTTGCCCTCAAAGAGATCATTTCTTATTTTAAACGC
CGAGGTTCGCCTGTCTTCGTTTGTTTTCTTGACGCTTCTAAAGCGTTTGA
TAGGGTAAATCACTACACACTGTTCAAGAAGTTAATTGACAGAAATGTAC
CTGTTTATTTAGTACGCATTATAGTACACTGGTTTTCTATGTTAACCTTT
AGGGTGCGCTGGGGGTCTACCGTCTCTGACAATTTCAGCTGCAGCAACGG
TGTCCCCCAGGGGAGTTTACTGTCTCCAATGTTGTTTAATGTATGCGCCT
CTGACCTTAGTGTCAAGCTAAATGCTGCTAATGCTGGCTGTTTTATGGGT
AAGGTCGCTGTGAATCACCTCTTCTACGCAGACGACTTATGTTTAATTTG
CCCTTCTGCGAAAGCTGTACAGAAACTGATTAACGTTTGTGAGGCCTATG
GTGCCGATAGTGATATAATCTTCTGCGCCAAGAAAACAAACTGTATGTAC
TTTCCATGTAATCGAAGTGCTCTGAATGTAACGCCGCCCTCAGTGAAGTT
GTACGGCAAGCCCTTGCCGTACGTTCCTTTGGCCACNTCTCTGACCTTAG
TGTCAAGCTAAATGCTGCTAATGCTGGCTGTTTTATGGGTAAGGTCGCTG
TGAATCACCTCTTCTACGCAGACGACTTATGTTTAATTTGCCCTTCTGCG
AAAGCTGTACAGAAACTGATTAACGTTTGTGAGGCCTATGGTGCCGATAG
TGATATAATCTTCTGCGCCAAGAAAACAAACTGTATGTACTTTCCATGTA
ATCGAAGTGCTCTGAATGTAACGCCGCCCTCGATCAGTGAAGTTGTACGG
CAAGCCCTTGCCGTACGTTCCTTCGGCCACTTACCTGGGTGTCCAAATCA
CTCCCGATCTTGCGGACGATGACTCCATTCGTAAACATACTCGGCATTTG
TACACAAAAGCCAACTCGCTTATTCGCAAATTTGGCCATTGCACACCTGA
GGTAAAGCGAACCCTTTTTATTACACACTGCACTGTAATGTACTGTGCGC
AGCTCTGGTCCAGCTACGAGTTGCATATCACGATTGTTTTAAAATTCTAT
TGTCGCTCCCGAGATACACCAGTAATAGTGAGCTTTTCGTAAATATGCGA
GTCGATACATTTGACGCCAAGCGTCGAAAACTGATGCACTCGTTTGTATC
TCGGCTCCTCGGGTCAGAGAACCTCATTATTAAGGTACTACTCCACTCGG
AGGCATTTCCGTCGAGCCCTTTTTGGCGATGTTACTGTCAGCTAGTTCGC
CATCGCCCACTGTGAACACTTTTTTAGATGTATCATTTATGTGTATGTGT
CTGTCTGTCAATATGGGCCGTCGTGCCCGAAATAAAC Coding sequence (CDS) from alignment at Sc0000120:250503..251889+ >transcript:BL72535_cuf0 ID=transcript:BL72535_cuf0|Name=transcript:BL72535_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=609bp|location=Sequence derived from alignment at Sc0000120:250503..251889+ (Branchiostoma lanceolatum)
GACATGTGTATCTTTGCCCTCAAAGAGATCATTTCTTATTTTAAACGCCG
AGGTTCGCCTGTCTTCGTTTGTTTTCTTGACGCTTCTAAAGCGTTTGATA
GGGTAAATCACTACACACTGTTCAAGAAGTTAATTGACAGAAATGTACCT
GTTTATTTAGTACGCATTATAGTACACTGGTTTTCTATGTTAACCTTTAG
GGTGCGCTGGGGGTCTACCGTCTCTGACAATTTCAGCTGCAGCAACGGTG
TCCCCCAGGGGAGTTTACTGTCTCCAATGTTGTTTAATGTATGCGCCTCT
GACCTTAGTGTCAAGCTAAATGCTGCTAATGCTGGCTGTTTTATGGGTAA
GGTCGCTGTGAATCACCTCTTCTACGCAGACGACTTATGTTTAATTTGCC
CTTCTGCGAAAGCTGTACAGAAACTGATTAACGTTTGTGAGGCCTATGGT
GCCGATAGTGATATAATCTTCTGCGCCAAGAAAACAAACTGTATGTACTT
TCCATGTAATCGAAGTGCTCTGAATGTAACGCCGCCCTCAGTGAAGTTGT
ACGGCAAGCCCTTGCCGTACGTTCCTTTGGCCACNTCTCTGACCTTAGTG
TCAAGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000120 | genome | Sc0000120:250503..251889 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72535_cuf0 |
| Biotype | protein_coding |
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