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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72565_cuf0 >transcript:BL72565_cuf0-protein ID=transcript:BL72565_cuf0-protein|Name=transcript:BL72565_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=379bp
SYRPIAIASPLLKVIESVLLTYLDDFLCSPSNQFGFKKKHGTDLCIFALK
EIIQYYRQRGSPVFACFLDASKAFDRVNHWTLFKKLMDRGVPMYLVRFLV
VWYSTLSFCVRWGHTLSDTFTAMNGLPQGSILSPILFNVYVSDLSTELLR
SGVGCYVGDTLVNHLMYADDICLVCPSVKALQRLISICELSGADIDMLFN
ESKTLCMYFPCRRFRMSMPLPPLMLYGTALKYASSTTYLGYIITPDLSDD
AAIRAHVRGFYSRANSLLRRFRYCSAAVKSELFSAYCSPMYCAQIWSNYS
VSAISKLRVAYHSAMKMLFSVGRHTSTSWLFVNNRTDMFDARRRKVTYSF
VTRLLSSDNDIIRVLVHSDGFCHRHSTFW Run BLAST on NCBI mRNA from alignment at Sc0000088:680792..681928+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72565_cuf0 ID=transcript:BL72565_cuf0|Name=transcript:BL72565_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1137bp|location=Sequence derived from alignment at Sc0000088:680792..681928+ (Branchiostoma lanceolatum)
AGTTATCGTCCGATTGCAATTGCCAGCCCCTTGTTAAAAGTTATCGAATC
TGTACTATTGACATACCTTGACGATTTCCTATGCTCCCCGAGCAACCAGT
TCGGATTTAAGAAGAAACATGGAACTGATCTATGTATATTTGCCCTCAAA
GAAATTATTCAGTATTATCGACAAAGGGGCTCTCCTGTATTTGCATGTTT
TCTGGACGCATCCAAAGCGTTTGACCGTGTGAACCACTGGACATTGTTTA
AAAAACTTATGGATCGAGGGGTTCCGATGTACCTAGTTAGATTCCTGGTC
GTGTGGTATAGTACGTTGTCATTCTGTGTCCGGTGGGGCCACACCCTCTC
GGATACATTTACCGCTATGAATGGTTTGCCTCAAGGCAGCATATTGTCAC
CAATCTTGTTCAATGTGTATGTATCCGATTTGAGTACCGAGCTACTGAGG
TCTGGAGTTGGTTGCTATGTTGGGGACACCTTAGTCAACCACTTGATGTA
CGCGGATGACATTTGCCTCGTCTGTCCGTCTGTTAAAGCGTTGCAGAGAC
TGATCAGTATTTGTGAGCTATCTGGAGCGGATATTGACATGTTGTTTAAT
GAATCGAAAACACTATGTATGTACTTTCCGTGTCGCCGCTTCCGCATGAG
TATGCCTTTGCCGCCGCTGATGCTGTACGGTACCGCCTTAAAGTATGCCT
CTTCTACCACATATCTTGGGTATATAATTACCCCTGATCTTTCGGATGAC
GCAGCAATCCGAGCTCACGTCAGAGGCTTTTATTCTCGGGCAAACTCACT
CCTCCGGCGGTTTCGTTACTGCTCAGCGGCGGTAAAAAGTGAGTTGTTCT
CAGCGTATTGCTCCCCGATGTATTGTGCCCAAATCTGGAGTAATTACAGC
GTGAGTGCGATCTCCAAGCTACGAGTGGCTTACCACAGCGCAATGAAAAT
GCTCTTTTCCGTCGGCAGGCATACAAGCACTAGTTGGTTGTTTGTGAATA
ACCGGACCGACATGTTTGACGCAAGGCGTCGCAAGGTCACCTACTCATTT
GTTACACGCCTGCTGTCGTCTGACAATGATATAATTAGAGTGCTTGTACA
CTCGGACGGCTTTTGCCATAGGCATAGCACATTCTGG Coding sequence (CDS) from alignment at Sc0000088:680792..681928+ >transcript:BL72565_cuf0 ID=transcript:BL72565_cuf0|Name=transcript:BL72565_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1137bp|location=Sequence derived from alignment at Sc0000088:680792..681928+ (Branchiostoma lanceolatum)
AGTTATCGTCCGATTGCAATTGCCAGCCCCTTGTTAAAAGTTATCGAATC
TGTACTATTGACATACCTTGACGATTTCCTATGCTCCCCGAGCAACCAGT
TCGGATTTAAGAAGAAACATGGAACTGATCTATGTATATTTGCCCTCAAA
GAAATTATTCAGTATTATCGACAAAGGGGCTCTCCTGTATTTGCATGTTT
TCTGGACGCATCCAAAGCGTTTGACCGTGTGAACCACTGGACATTGTTTA
AAAAACTTATGGATCGAGGGGTTCCGATGTACCTAGTTAGATTCCTGGTC
GTGTGGTATAGTACGTTGTCATTCTGTGTCCGGTGGGGCCACACCCTCTC
GGATACATTTACCGCTATGAATGGTTTGCCTCAAGGCAGCATATTGTCAC
CAATCTTGTTCAATGTGTATGTATCCGATTTGAGTACCGAGCTACTGAGG
TCTGGAGTTGGTTGCTATGTTGGGGACACCTTAGTCAACCACTTGATGTA
CGCGGATGACATTTGCCTCGTCTGTCCGTCTGTTAAAGCGTTGCAGAGAC
TGATCAGTATTTGTGAGCTATCTGGAGCGGATATTGACATGTTGTTTAAT
GAATCGAAAACACTATGTATGTACTTTCCGTGTCGCCGCTTCCGCATGAG
TATGCCTTTGCCGCCGCTGATGCTGTACGGTACCGCCTTAAAGTATGCCT
CTTCTACCACATATCTTGGGTATATAATTACCCCTGATCTTTCGGATGAC
GCAGCAATCCGAGCTCACGTCAGAGGCTTTTATTCTCGGGCAAACTCACT
CCTCCGGCGGTTTCGTTACTGCTCAGCGGCGGTAAAAAGTGAGTTGTTCT
CAGCGTATTGCTCCCCGATGTATTGTGCCCAAATCTGGAGTAATTACAGC
GTGAGTGCGATCTCCAAGCTACGAGTGGCTTACCACAGCGCAATGAAAAT
GCTCTTTTCCGTCGGCAGGCATACAAGCACTAGTTGGTTGTTTGTGAATA
ACCGGACCGACATGTTTGACGCAAGGCGTCGCAAGGTCACCTACTCATTT
GTTACACGCCTGCTGTCGTCTGACAATGATATAATTAGAGTGCTTGTACA
CTCGGACGGCTTTTGCCATAGGCATAGCACATTCTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000088 | genome | Sc0000088:680792..681928 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72565_cuf0 |
| Biotype | protein_coding |
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