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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72648_cuf0 >transcript:BL72648_cuf0-protein ID=transcript:BL72648_cuf0-protein|Name=transcript:BL72648_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=246bp
MLYALQVPRPVISVIEGRGGMLYALQVPRPVISVIEGRGGMLYALQVPRP
VISVIEGRGGMLYALQVPRPVISVIEGRGGMLYALQVPRPVISVIEGRGG
MLYALQVPRPVISVIEGRGGMLYALQVPRPVISVIEGRGGMLYALQVPRP
VISVIEGRGGMLYALQVPRPVISVIEGRGGMLYALQVPRPVISVIEGRGG
MLYALQVPRPVISVIEGRGGMLYALQVPRPVISVIEGREGCYMHSK Run BLAST on NCBI mRNA from alignment at Sc0000714:5161..6626+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72648_cuf0 ID=transcript:BL72648_cuf0|Name=transcript:BL72648_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1466bp|location=Sequence derived from alignment at Sc0000714:5161..6626+ (Branchiostoma lanceolatum)
CTTACATTGTGTATTTATGAGTTATTGTGATCAGAAACTATTAACTTTGT
TATAAGTAACAGTTACATTTAGATCATAACATTTGTGTATACTACATGGA
TTTGGAGACTTTCTTTATATTTGATTATTCTTTGTAGATATAAAGTTCAT
CAAAGTAGGGTCTAAGACTTAATGAGAATATTTAACGTTAAATGAGATAG
AGGAAAACCATTTGCCTCATAGTAAATCCATGAACATAAAAAAACATTGA
TTCATAGTTGTTACGTTGTAACTCATGATCTCAGTAGGTAGTGGGGGTTG
GGGTGGGCTGTATACACTGTGAGTACACTTGTATAGCTTCTTATCTTGTG
TGTGTGTGTTATAATGAGTCAATTGTAAGTTGTTGCCCATAGGCACATGT
AACTAACTGCAGGAAAGGACTGACAGACAATTGGTACCACAATATACCAT
GTGACTATTCTAGCTTATTTGGGTTTATATGCAAAGCGATTCCCCGCCCT
GAGTTATCTCTGTTATCGAAGGGCGGGGAGGGATGTTATTTGCACTCCAA
GTCCCCCGCCCTCAGTGATATCTGTTATCAAAGGGCGGCGAGGGATGTTA
TATGCACTCCAAGTCCCCCGCCCTGTGATATCTGTTATCGAAGGGCGGGG
AGGGATGTTATATGCACTCCAAGTCCCCCGCCCTGTGATATCTGTTATCG
AAGGGCGGGGAGGGATGTTATATGCACTCCAAGTCCCCCGCCCTGTGATA
TCTGTTATCGAAGGGCGGGGAGGGATGTTATATGCACTCCAAGTCCCCCG
CCCTGTGATATCTGTTATCGAAGGGCGGGGAGGGATGTTATATGCACTCC
AAGTCCCCCGCCCTGTGATATCTGTTATCGAAGGGCGGGGAGGGATGTTA
TATGCACTCCAAGTCCCCCGCCCTGTGATATCTGTTATCGAAGGGCGGGG
AGGGATGTTATATGCACTCCAAGTCCCCCGCCCTGTGATATCTGTTATCG
AAGGGCGGGGAGGGATGTTATATGCACTCCAAGTCCCCCGCCCTGTGATA
TCTGTTATCGAAGGGCGGGGAGGGATGTTATATGCACTCCAAGTCCCCCG
CCCTGTGATATCTGTTATCGAAGGGCGGGGAGGGATGTTATATGCACTCC
AAGTCCCCCGCCCTGTGATATCTGTTATCGAAGGGCGGGGAGGGATGTTA
TATGCACTCCAAGTCCCCCGCCCTGTGATATCTGTTATCGAAGGGCGGGG
AGGGATGTTATATGCACTCCAAGTCCCCCGCCCTGTGATATCTGTTATCG
AAGGGCGGGAGGGATGTTATATGCACTCCAAGTAACTGCACTTGAGATAC
AGTTTTGCAGGGGTTTACACTCATTTAACAGGGATTTACTGGTATTTACT
TGGTAAATGTATGGTAAAGGTGGGTAAATGTCATACACCATATTTACCAA
CAATTTACTCCTTCCA Coding sequence (CDS) from alignment at Sc0000714:5161..6626+ >transcript:BL72648_cuf0 ID=transcript:BL72648_cuf0|Name=transcript:BL72648_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=741bp|location=Sequence derived from alignment at Sc0000714:5161..6626+ (Branchiostoma lanceolatum)
ATGTTATATGCACTCCAAGTCCCCCGCCCTGTGATATCTGTTATCGAAGG
GCGGGGAGGGATGTTATATGCACTCCAAGTCCCCCGCCCTGTGATATCTG
TTATCGAAGGGCGGGGAGGGATGTTATATGCACTCCAAGTCCCCCGCCCT
GTGATATCTGTTATCGAAGGGCGGGGAGGGATGTTATATGCACTCCAAGT
CCCCCGCCCTGTGATATCTGTTATCGAAGGGCGGGGAGGGATGTTATATG
CACTCCAAGTCCCCCGCCCTGTGATATCTGTTATCGAAGGGCGGGGAGGG
ATGTTATATGCACTCCAAGTCCCCCGCCCTGTGATATCTGTTATCGAAGG
GCGGGGAGGGATGTTATATGCACTCCAAGTCCCCCGCCCTGTGATATCTG
TTATCGAAGGGCGGGGAGGGATGTTATATGCACTCCAAGTCCCCCGCCCT
GTGATATCTGTTATCGAAGGGCGGGGAGGGATGTTATATGCACTCCAAGT
CCCCCGCCCTGTGATATCTGTTATCGAAGGGCGGGGAGGGATGTTATATG
CACTCCAAGTCCCCCGCCCTGTGATATCTGTTATCGAAGGGCGGGGAGGG
ATGTTATATGCACTCCAAGTCCCCCGCCCTGTGATATCTGTTATCGAAGG
GCGGGGAGGGATGTTATATGCACTCCAAGTCCCCCGCCCTGTGATATCTG
TTATCGAAGGGCGGGAGGGATGTTATATGCACTCCAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000714 | genome | Sc0000714:5161..6626 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72648_cuf0 |
| Biotype | protein_coding |
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