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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72698_cuf2 >transcript:BL72698_cuf2-protein ID=transcript:BL72698_cuf2-protein|Name=transcript:BL72698_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=168bp
MWAHGLLVVSLLTVPGASATGLNGIPIVGIYGTIGVLFGISCICLCCCNF
KRIRRYTELEPIYTTSQNIGMSPTGVQNSAFTPEHQPAFNSQYSPTDNPQ
ALPTVAYPPSAAVYSPAYPPTFPPSSAPLLTPPSPSSPPPDFTPPPAYED
ATCSEISPPPQPLQPDSS Run BLAST on NCBI mRNA from alignment at Sc0000222:1624..4109+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72698_cuf2 ID=transcript:BL72698_cuf2|Name=transcript:BL72698_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2486bp|location=Sequence derived from alignment at Sc0000222:1624..4109+ (Branchiostoma lanceolatum)
GTCCATAACGCGAGGTATTAAAACCGCAGTACCCAGGATAGCCGCAAGGG
GGCCCCAAATGTACTCATATTCTGTTCTTGTCAACCTACCAACACGCCAT
ATAGGAAACCAGTTCAGACAGATACAGACAAGCGCTGCCTGAAATATAAC
TTCCGTTTTTCATGAAGGTAGCAAAGGAAGATCTGTCAAGGCCTTGTTTG
AGACGATCATGAGTGGCTAGAAAAAAATAGCCCCTGGGCGATATAGAGAG
AGACAAAGATCTACACCAGCGTTTGACACTCTGCCAAGTACTGTGTACTG
CACAGTATGCAAATTCACAACAGGGTGACTGTACAGAATATCATTGACCC
CCATAAGGAAGTGTCAAACCATACAGACACAACTCTGAAAGCGCCTCTTT
TACGTGCATAAGTCGATGTGAGTGAATCTATTTTACGTCGCTCTGTCTTT
GATTACGCTACTGCGGCACAGACAAGCCCGACGGGAACAATCTGTTGATC
GAGGCCAGAGTCAAAGAAACCCCCAGAAAGCCGAATGTGGGCGCACGGAC
TTCTTGTGGTGTCACTACTTACGGTTCCGGGTGCATCTGCCACAGGTAGG
TTATTCTGCTCTCTGTGTTTGGTTAGCGTAAGGTCAGTAGGCTGATTTTA
CCTAGGCATCCTTTACTATTTCCACGACACGGTGGATAGACCATTTGTTT
TGAAACAACGTTACTTTCAAATCGTGAACAAATCGGTTGGCACATACATT
TAGCTACCAGGGATTTCACCGTTATCAAGTACATTCTTCGACACCTAATG
GTGAACTTGAATATAACTTAATACTTCTACCTAAAGGGGGAGGGGCGCTG
TAATGCAGTTAACATGGCTGTCGCGACATACACAGGCAGTTCAACCACTT
TGTCTATTTAACAAAAATTGCCAAAGAGCCCAAAAGGCCAAGGTCACATG
CCCAAGCACTGTTTTTTTAGTGAATGATGTAATTCGAAGAATGCGTGCAA
TTTATTTATTTATTTTGACAGAAGTTGAAGAAAGTCAGTTTCCTTCGATG
CAACTTGCTTGTCTGATTTTCACATATCTATCTATCCATAATGACTATTG
TAAAAGAGTTGTTGCAAACTTGGCTTTGTAAGATGTCACATAAGTTTCAA
CGTTTCTTTTCACAGGTTTAAATGGCATACCTATCGTTGGCATCTATGGC
ACTATAGGCGTGTTGTTCGGCATTTCTTGTATTTGTTTGTGTTGTTGTAA
CTTCAAACGAATCCGCCGATACACTGAACTCGAGCCGATTTATACGACAT
CCCAGAACATCGGTATGAGTCCTACAGGAGTGCAGAACAGCGCCTTTACT
CCTGAGCATCAGCCCGCATTCAATTCCCAGTACTCCCCTACTGACAACCC
ACAAGCCTTGCCCACCGTGGCGTATCCACCCAGTGCTGCTGTATATTCCC
CCGCATATCCTCCCACTTTCCCTCCTTCCTCGGCCCCTCTCCTAACCCCT
CCTTCCCCCTCCTCCCCTCCCCCAGACTTCACCCCTCCCCCAGCTTACGA
AGATGCCACCTGCTCGGAAATATCTCCTCCTCCACAACCATTACAACCAG
ATTCCTCCTGAGTAACCCAGCGTGTGTTCAGCCTCGGTTCGCCTGCATAT
GGATCTCCTTCATCTAATGAAGACGGCACCATCATGTCATCACCGCCTTC
TTCCCGACAGTCATCTTCACATGCCTCATCAACAGACCAACGGGCTTCAC
TCTCAGTTCCATCTACTATATGTTAAACCTTCAGCTAGACCCTACCAGAC
TCAATGAGTTGCTGAAAAAATGGTACTCTATTGCCGGCTAACTCTTACGG
CACATCATTCAGTCTATTGGACCACGCTCTTGTGTCATGGAGTCTGGTAG
CAATTTTACGATGTAAGAAAAATTAACATTTTCATTGAACTTAAACTTCA
CGGTGGTTTAAAGAACGGATGTGTTAGAGAATTATAAATGATTACAATAG
GTTTTCACGGTGATGATAAGTTCACGGTACAGAGGTGACCGTGAAAGTAG
TGAACATAAAATTACAGTGCAAGAAAAAAATTCTGTATATGGGTTCAGAT
TGCATTACCGCAAACCTAGATATATTAATACATAGTCTAGCTGATGTCAT
ACCAATCTATCGTCCGTCAGTTTTAGATTATGGAAGTCGTTAAGCTTTTT
CCTCAAAGATCCGGCTGCTCGTTAAGGTATTTAAGTATCTATTGTGCAAC
CTAACATTTTTTTATTATTTGTTTAATTATTTAGGTGTCATCGTCAGTTA
GAAACTTTATTTCACCATCTATACTCATATCAATCATCATAATATTCAGT
ACATAACTTTTATGGCTTTAATGCGTACTTTGTACATTATATCTGAATTC
ATTGGTGTGTCCTAAGATTGTTGTGACTTTTCTGGAACTACATAAATGTA
TCAAACTATACTAGCCACCGCATGTGCTCTCTCTGA Coding sequence (CDS) from alignment at Sc0000222:1624..4109+ >transcript:BL72698_cuf2 ID=transcript:BL72698_cuf2|Name=transcript:BL72698_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1014bp|location=Sequence derived from alignment at Sc0000222:1624..4109+ (Branchiostoma lanceolatum)
ATGTGGGCGCACGGACTTCTTGTGGTGTCACTACTTACGGTTCCGGGTGC
ATCTGCCACAGGTTTAAATGGCATACCTATCGTTGGCATCTATGGCACTA
TAGGCGTGTTGTTCGGCATTTCTTGTATTTGTTTGTGTTGTTGTAACTTC
AAACGAATCCGCCGATACACTGAACTCGAGCCGATTTATACGACATCCCA
GAACATCGGTATGAGTCCTACAGGAGTGCAGAACAGCGCCTTTACTCCTG
AGCATCAGCCCGCATTCAATTCCCAGTACTCCCCTACTGACAACCCACAA
GCCTTGCCCACCGTGGCGTATCCACCCAGTGCTGCTGTATATTCCCCCGC
ATATCCTCCCACTTTCCCTCCTTCCTCGGCCCCTCTCCTAACCCCTCCTT
CCCCCTCCTCCCCTCCCCCAGACTTCACCCCTCCCCCAGCTTACGAAGAT
GCCACCTGCTCGGAAATATCTCCTCCTCCACAACCATTACAACCAGATTC
CTCCTGAATGTGGGCGCACGGACTTCTTGTGGTGTCACTACTTACGGTTC
CGGGTGCATCTGCCACAGGTTTAAATGGCATACCTATCGTTGGCATCTAT
GGCACTATAGGCGTGTTGTTCGGCATTTCTTGTATTTGTTTGTGTTGTTG
TAACTTCAAACGAATCCGCCGATACACTGAACTCGAGCCGATTTATACGA
CATCCCAGAACATCGGTATGAGTCCTACAGGAGTGCAGAACAGCGCCTTT
ACTCCTGAGCATCAGCCCGCATTCAATTCCCAGTACTCCCCTACTGACAA
CCCACAAGCCTTGCCCACCGTGGCGTATCCACCCAGTGCTGCTGTATATT
CCCCCGCATATCCTCCCACTTTCCCTCCTTCCTCGGCCCCTCTCCTAACC
CCTCCTTCCCCCTCCTCCCCTCCCCCAGACTTCACCCCTCCCCCAGCTTA
CGAAGATGCCACCTGCTCGGAAATATCTCCTCCTCCACAACCATTACAAC
CAGATTCCTCCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000222 | genome | Sc0000222:1624..4109 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72698_cuf2 |
| Biotype | protein_coding |
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