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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72862_cuf0 >transcript:BL72862_cuf0-protein ID=transcript:BL72862_cuf0-protein|Name=transcript:BL72862_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=162bp
TRFPNPLGLPDQDLALAVAPAVFTALDMVTRCPHLDSFLCSLMFPRCTPE
GMRMPCRSFCRNVIRMCAGPVLGDMQHWLTLFCDALPERNCTRPAPCEPI
HHATCRTLVPYNTTGFPNLLGHGSQAELLADPVTLNDTAQLINSGCHPEI
GFAVCSAMVPNC Run BLAST on NCBI mRNA from alignment at Sc0000166:235013..236287+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72862_cuf0 ID=transcript:BL72862_cuf0|Name=transcript:BL72862_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1275bp|location=Sequence derived from alignment at Sc0000166:235013..236287+ (Branchiostoma lanceolatum)
GACCCGTTTCCCGAACCCCCTCGGCCTGCCCGACCAGGACCTGGCGCTGG
CGGTGGCACCTGCCGTCTTCACGGCGCTGGACATGGTCACTAGGTGCCCT
CACCTGGACAGCTTCCTGTGCTCTCTCATGTTCCCGCGGTGCACACCTGA
GGGGATGAGGTACGTTTCTGTGAGTGTGTGTGTGTGTGTGTGCGTGTGTG
TGTCTATATGTGTGTGTATGTGTGTGTCTGTGTATGTGTCTATGTATGTA
TGTGTGCTTACGCGCGCGCATGTGTGTGTGTGTGCGTGTGTGTGTGTCCG
TGTGTGTGTGGGGGGGGGGGGGGGGGGGGNNNNNNNGGGGGGGGGGGGGG
GGGTGGTGCGTTTGGGATGAGGTACGTGTCACAAGACACGAAATGTGCTG
GGATTTTGTTCACCCTTATCACAAACGTCAACTTAATTCATACAGGCTTA
CGTAGTGATTGTTCATAGTATCTTGTGGTTCGACATTGCTGCATATTCGT
CAGCATCCTTGTTCTTCTTACACAAAAGTACAAATCCCCAATATAGACTA
ATATTCATATTTTTGTACCCACAGAATGCCGTGTCGTTCGTTTTGCCGTA
ACGTCATCAGAATGTGTGCAGGACCGGTACTGGGGGACATGCAGCACTGG
CTCACGCTTTTCTGTGACGCACTTCCGGAACGCAACTGTACACGGCCTGG
TCAGTACTGTTAATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGT
TTGTCTGTTTGTTCGTTCGCAAATGGTATTTACATGACAGCAAGCAGTGG
ATCAAATCTGGAAGCTTGTGGCGTCCTCCGTCAGTCATATTGAAAACTAC
AGTGAAATTGCGTCTTAAGATTGACTTCTACCAACAAGGATTCACTTTCG
ACCAATGATAAAACGTCTTCTTTTTGCTCATCCAATGCGGAATGTGCCGG
AATGTCAAAGAAAAACGCACGGACACACAAACAGACGGACAGACTAAAAC
AATGCTTGGGAGATACTTCTTAAGTAGTAAAAGTTTTAAAGTATTTTCTT
GTTAAACATCTTGATTCCAGCTCCGTGCGAACCGATCCACCACGCCACCT
GCCGGACCCTCGTGCCCTACAACACCACGGGGTTTCCCAACCTGCTGGGG
CACGGGTCGCAGGCCGAGCTGCTGGCGGACCCCGTGACCTTGAACGACAC
CGCCCAGCTGATCAACTCCGGATGTCACCCCGAGATCGGGTTCGCTGTCT
GCTCCGCCATGGTGCCCAACTGTCA Coding sequence (CDS) from alignment at Sc0000166:235013..236287+ >transcript:BL72862_cuf0 ID=transcript:BL72862_cuf0|Name=transcript:BL72862_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1458bp|location=Sequence derived from alignment at Sc0000166:235013..236287+ (Branchiostoma lanceolatum)
ACCCGTTTCCCGAACCCCCTCGGCCTGCCCGACCAGGACCTGGCGCTGGC
GGTGGCACCTGCCGTCTTCACGGCGCTGGACATGGTCACTAGGTGCCCTC
ACCTGGACAGCTTCCTGTGCTCTCTCATGTTCCCGCGGTGCACACCTGAG
GGGATGAGAATGCCGTGTCGTTCGTTTTGCCGTAACGTCATCAGAATGTG
TGCAGGACCGGTACTGGGGGACATGCAGCACTGGCTCACGCTTTTCTGTG
ACGCACTTCCGGAACGCAACTGTACACGGCCTGCTCCGTGCGAACCGATC
CACCACGCCACCTGCCGGACCCTCGTGCCCTACAACACCACGGGGTTTCC
CAACCTGCTGGGGCACGGGTCGCAGGCCGAGCTGCTGGCGGACCCCGTGA
CCTTGAACGACACCGCCCAGCTGATCAACTCCGGATGTCACCCCGAGATC
GGGTTCGCTGTCTGCTCCGCCATGGTGCCCAACTGTACCCGTTTCCCGAA
CCCCCTCGGCCTGCCCGACCAGGACCTGGCGCTGGCGGTGGCACCTGCCG
TCTTCACGGCGCTGGACATGGTCACTAGGTGCCCTCACCTGGACAGCTTC
CTGTGCTCTCTCATGTTCCCGCGGTGCACACCTGAGGGGATGAGAATGCC
GTGTCGTTCGTTTTGCCGTAACGTCATCAGAATGTGTGCAGGACCGGTAC
TGGGGGACATGCAGCACTGGCTCACGCTTTTCTGTGACGCACTTCCGGAA
CGCAACTGTACACGGCCTGCTCCGTGCGAACCGATCCACCACGCCACCTG
CCGGACCCTCGTGCCCTACAACACCACGGGGTTTCCCAACCTGCTGGGGC
ACGGGTCGCAGGCCGAGCTGCTGGCGGACCCCGTGACCTTGAACGACACC
GCCCAGCTGATCAACTCCGGATGTCACCCCGAGATCGGGTTCGCTGTCTG
CTCCGCCATGGTGCCCAACTGTACCCGTTTCCCGAACCCCCTCGGCCTGC
CCGACCAGGACCTGGCGCTGGCGGTGGCACCTGCCGTCTTCACGGCGCTG
GACATGGTCACTAGGTGCCCTCACCTGGACAGCTTCCTGTGCTCTCTCAT
GTTCCCGCGGTGCACACCTGAGGGGATGAGAATGCCGTGTCGTTCGTTTT
GCCGTAACGTCATCAGAATGTGTGCAGGACCGGTACTGGGGGACATGCAG
CACTGGCTCACGCTTTTCTGTGACGCACTTCCGGAACGCAACTGTACACG
GCCTGCTCCGTGCGAACCGATCCACCACGCCACCTGCCGGACCCTCGTGC
CCTACAACACCACGGGGTTTCCCAACCTGCTGGGGCACGGGTCGCAGGCC
GAGCTGCTGGCGGACCCCGTGACCTTGAACGACACCGCCCAGCTGATCAA
CTCCGGATGTCACCCCGAGATCGGGTTCGCTGTCTGCTCCGCCATGGTGC
CCAACTGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000166 | genome | Sc0000166:235013..236287 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72862_cuf0 |
| Biotype | protein_coding |
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