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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73303_cuf1 >transcript:BL73303_cuf1-protein ID=transcript:BL73303_cuf1-protein|Name=transcript:BL73303_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=195bp
MVADDKLPTQGNHHNEPTNEPTNQRTNQPTNELTKQPNNQRTNQPTNQPT
NNPINQRTNQPTIQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQ
PTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPT
NQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPSNQPTKQTTDQSTS Run BLAST on NCBI mRNA from alignment at Sc0000026:1251015..1258624+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73303_cuf1 ID=transcript:BL73303_cuf1|Name=transcript:BL73303_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=7610bp|location=Sequence derived from alignment at Sc0000026:1251015..1258624+ (Branchiostoma lanceolatum)
AACAAACGTAGCTTACTGCATTGATACATCTGGACGTGCTGAGACAAAGT
TTGCTGTCAAGAGTATAATTTAGCAAGAACAAGGGATTAGAGCCCGCTAA
ACGATCTATCGACAGTTCGTCGCTCGCGAGGATACGGTATAGTCACCATG
GCTGATGATGAGAAAAAGGAGCAGGGAACAGGCCAAAATACGCAGCAGGG
ATCAGGGGCTCAAGCAACCAAGTCCCACGGCCCACCAAGCACCACGTCAC
AGACAAGTACCACAACTACAACTGATGGAAGCAATTCCAACACGGGATCC
ACCTCCCAAGGGTGGAAATCGTGGATGCCATCATGGTAGCAGGTAAAAAC
ACAATTTTTTGGAAAATTTAGTGCCATATTTCAGCAAATACATTAAAAAA
GCAAGTGTCTACAACTCAAAGAAAGAAGTGGTATATAGTGCTCTCTTTGG
TATCAAATAAAAGCAATTCTTATAATAGGTGTACTATTTAGGTATTTGGG
ATTGACATGTGGAAGGCAAAAACCTTCTCAAAGGGAGGGAAAGGACAGCA
ACAATGTCTTAAACATTTGTTTCTCACCCTTTGTTTTGGATGAAGGAGAC
ACACGACAATATATTTCAACTCAGCTGAGCTTTAAACGAGAGAGAGAAGA
AGATAAAGAGAGCACCAGGTGGGAGCTAGAACCAGGAGGGATCTACTACA
ACACAATCGAGAAGCTTACAAGCTCCGATTTACTAAAGAAAAGGACTGAA
ACGTTAACTGCCTAGAAAGTCTGCATAAACAGATTGGGATTTCATTTTTA
GTACACGCGGAACCCTATGTTATAACTTTAAATAAAAACCATAGCTGTCT
TCTGGTACATATTATAGAGTTATAAACCTCCAGTTGATATGATTCCTATG
TTTTGTTGGCGTATGCTTGGACGTTATAAGAATGCGTTTGGCAAATGATT
TATATGACAATGTTAATGAAGTTTATTACATCTTCATGCCCCACTGGTGC
TGAATGCGAGTGTGCGAAGTTAAAATACATAGTTATAACAAGCCCCTAGC
TCAAACTTATCATAAACAACTATCACAGTGAATATATGTTCTTTTAACAT
TATAATTGTTTGTCATGAGTTAACACTAAACGTCCTGGTCCTAGCTTCTC
AGTTTTGAATCGGAACTGAAAGAACTCTCAGGCATATGTTCTATATAGCT
TACTATCAATGTGTGTATCGAGTTCGAATTAGCACACTTATCTATTCACT
GAAGCATAGTATCCAGAACATGATCCAGACAGTGGTGATGGTCTAAAGCT
GTATCAAACCCAAACAACAAATATAGATGTGTATTCAGTTTGACTTATCT
ATTTACTGAAGCATATATATAGTATCCAGAATATGATCTACTTGCAAACA
TCTGTCACATGGTTGTCTACTATAGGCATTGAGAATGACTAAGTGAGTAA
CTGTTAAATATACCACTGAGTCTCATTTAAAGCTCATCTAATTTGGTTCC
CTATTCATTCACAATTCCCTCAGTCATATTGAATCCTCTTGCAGCTACAC
GCTTAAGAGCAACTTAATAATTCCTAGTTTGTCAAACTCATAGAAAATAA
ATGAGTACAGTTATAATCCAGAACCTAACCAATCTAATTTGATACAGAAT
ATACCATGTAAGCTCACTTGAACCTTTTTGTGGTCACTAAACACAATATT
GGCCCTCTCTTTACAATTGGGAGTGAACACGTAACAGATTGCAATATAAA
CTGTATACACAGCAGGCTACCCTTCCAAAGGTTTGACAGGTCTTATAAAC
GGTACTCAGACGTTAACTGATACAGGAATATAGTTAGTATTACTCGATCC
GTACGTGACACCGACTGAAAAGTAACGTTTTTGGTACAGTCGCGAAGAAT
TCGAAGTACGAGTGGTTTTGTGACATCGTGTAGTGTAATCATATGGTTGA
TGAGTTGCCCGAGAATCAGGAGGCTCTGGGTTCGAACCCAGATGTTGTGC
CCTTGGGTAAGGCACTTAAAACGAATTTCCTAACTATACTCAGGTGAAAA
TGAGTACCTAGCTTCGGTCAGGGACGTCCCTCGGATAGGACATTACATGA
ATGTACCCTGTTTGAGGATTACTACACATCGAGAGCCCGCTACCATACTT
ATCGGGAAGAGTAGGGGTCCATCCCGGTGTGTGTGTCTATTTTACGCGCA
AGGAAAAAAAAGAAACAGCAAAACTGCTTTGGCAGAATGGATGATTGTTC
TATCTTACAAAGGAATACGAGTACCTTGTACCTCGCACGGAATATGCTTA
TAAAAGTGCGATTTTCTTATTCAATCAGTGTGGTTTTGGCGCCATAGCAT
GTGTTAGAAAACATTGTGTGAAACTATACGGCAAATTCGAGAGTAAGATC
GTCGAGCCAGTCCTCCAAAGTTAATCCTAGGTCAAAATAAACACGTCAGA
CAAACAGTATAGATTTATCACCAAATCAGTTAAAAATTATTCCTAATTGA
CTTGCCTCGTATATATATGTATATATATTGCTGCATCAATTTTGTTCGTT
CGTCATATCCATGTGGTATTCATACTATAGTTGTGAACTGTTCTGTACCA
CACATACGGTACTTTTCTTAACAACTATGTCTAGGTGTCTTTTCCTCATT
TTTTATTAAGAAAAAACTGTGTTCTGTTTAGGACGCAATCACGAACAATT
TCTGAAAAAATTAGCTTTTGGTTTTGGAGACTTTTCGTGATCGTCTGAAT
ACAGACAGACATGAGAAGAGAAACGAGGGCCTTAAGAGAATTAAGCAGTC
TTCTATTTTCATTTTACTGTGACATCATCAAACTAGCGCTAATTATATAA
GGGTTCGTGCCACTTGTTATAAACAATATTTGAGAAGACTAGAATTTTGC
ATCCTGATTTTCCGGAGTATAAACATCGAAAGGAAACGCGATGTCCTGTT
TCAACAGTTTAGCACGCTACCCCAATTCCACTAGACGATGTTCGCGGTGC
GATCTTGCACGCAATTTGTAAAACCCTTGAATTCGTAGCTGGAATCGAAT
ATCATGCAAAATGTACAAGTATAACGGAAAAGGTAAAAAAACGTAAAAAA
GTCCTTTTTTTATCATCGGTCAAATCTAAGGTCGCAGGGAATTGGTCGTG
CTATTGAAATCGGGGTATTTTTGTAGACCAAAGGCAGACCATAAGTACGC
CACAAAAATTGTGAGTGTGAAATACGGTCTTGGAGTAAACGTTCAATTTG
AAGCTTTGACTATTCCACCGGATTACAAAAAAATGAGCTTGGAACTAAGC
ACGGAATATTGTTACAATGCACGTGCAGTACTAGCATATCTGTAAATCGG
GCCGGGTGGCATTGCGTGCGACGATGCTTGAGAAAAAAAAAAAACGAGTG
CTCACAACCATACGTCGATTAAGATACCAAAAGCATCTGAAAATTCCTAG
ATTTTTAGCTCAACACCAAGATAGATACTTTAAAAGTATACAAAATAAAA
TTATATTATTAAAAACAGAAACTGGATTACATATTTTACGGTTTAAATGT
CATTGTCTGAATTTTTAGACAGACAGTGCCATGGCGCCATGGCGATCGCA
AAACTGTATGTTATATACAAATGTCATTATGTTGTTGCGCATATATATCT
AGTAGTTACTTTTTAACGCCATCTAAGTGTATGATTTAAGTTCAACCGTA
AGCATATTGATCTAATATTCCTAAGTACAAATACCGGGCTTTTTAACCGT
CGCTATCACCGTGTAAGTGAACATGAAAAATAACAGTATTAGCTTGTCAT
TCAGTTTAATTCATTTGGGTGCGGCCCGTTCAGTTCAAAGGCGTCGTTTT
AAAAAGAGTTTAAAATCTCAGAATAACACAATCTATACTTATCAATAATT
GTGTCAACTGTTAAAAGATTATTGAATTATGACGATCAATTTGACATCCT
TTTTTGTTCGGATATACGCGTACACACATACAGAACATTGCAATAATCTA
GTTAGGGCCCCCTCTTTGGGCCCCCCATTGAGCTGTACGTATACGCCCTG
CATTCTTAAAACATGTACTCAGGTGGTTATTTCGCAAATTCAAACTGCAT
TGCGCAACGGCAGTCTGCCCCCTTTCTCTCCCAAGTCCTCTGATTACACT
GAAAATAAAGTATCACACTTACTCGTTACGAAGGGGGATCCCCCGGTCGC
CAGATCCAGTATATTCCAGAAAGAACAGAGATTCAAACGCGGGACTTTCC
AAAGAAAGGTACACCCGCTTTGTTCATGTCATGTGACACAGGTCTTAAGC
ATACAAGCACTGGAGACACCCCCTCCGAGTTTGCTTACTTAGATAAAAAT
CTGGTTTCATAGCACTTTATAAAGCCAAACCATTAAGATATTAGAATCAT
TAAATGTTAAAATCATACTTAAAAAGAACTGTACATTTGTAGTAGACAAA
GACAAAAATATTCCTTCTGAACTAATAGTAGCAATCAAAACTACATATCA
TTTCATAATACAAATGTTGTCTTTGTATCGCAACTATTCAGTGTGTTAAT
GTGACATATTTTGTAAGAAAAATACTATTATATATCTATAGAAAACATCG
TGTATTACTTCCATGAAGACACACATCATTCAGATGACGTAGACCAAGTA
AGCTTCCAGATGTTGTTTTTTCTGCCTAACTATGTATTTGTTGTACTGGT
CAATCTAATAGTATGTAGTTAAAGCGCCCCCTACTGCGGGGCAGCATATT
TCTAACAGGTAATATTCGTTCAGACCCTTGTGGTGCCTGAAAGTTTCCTT
GCTGTTTCAGTAGCAGCTTAGCTTTTCTCCTTTAACGTGTTCGAGGCACC
TTATCTGAGAGGCTGTTGAAATAAAGGGACAGCCCTAACAGGTAATGTAT
CAGATGCAGGCAGAATTTCCACGGGACGGAAATCCAGTGCACTAGTGGGT
TGATGAACTTTATTTGCTCTCTGCCAGAAATTGGCTATTGCAATGTACAA
TGTACAACAAAAAAATAAATAATCACAACTGATAAACATAAACATCACAG
TAAATAAATAAGCGTAAAGCATGAACCACAAAATCAACCCAGTACAAAAT
ACTGAATAATAAATAAGAAAAATGAAATAACACTTGAAAAAGAATGTTTC
CATAACTAACGAAAATTAAAAGCGGCTACACACAATAAAGTAATTGCAAA
TTAATAACTTAATCATAAAATCAAGATCATAATAACATAACATAATCAAA
TCAATAATAGAGCAATCGTGTCATAAAACATAAAACAAGTTAAGTGGACA
TGGCAGACCGAAAGTGGGTAACCGAAGAGTAAGTAAAAGTCAGTGGTCAT
TGAAACCTCATTAGAAAGGCACAACAAGACGTTCGAGATCATTTGAAAAC
CCTTAAGATCATAAGAAGACCTTGATAATCATTGAGATCATTAAAAGAAG
ACCATTGTGACACCGCCATGTGAATTGTACATGTAATTTAAAACACACAA
AAATTGGACTTGCCCAAATTGTCGACCAATCAACTCCAGCAGTCCCTGTC
ACGGAAATGAGGTAGATGCAAAACGGATTTTAATTTGCACCAATGGTAAA
CTACTTTGCCATGTCAATCATTTCATTCACGAACATGATTCTGCCAATAC
GCAGCTTACGATTAATAAGTTAACTCCGATTTCAACCAATAGAAAATACG
ATGGTCCTGTCAATCAACTGACTATCCTAACAGTAAAACGTGCGCGCGTA
TGGCCATTTATGCCATCTTTCCTGGGCACGAAAGTCTTGACTTCAACGAA
CACTATAGAAGAACCAGTTTAACTTTTTGAGTAACCATGCCGAAAGAAAA
AGGCCAGGGCAGCAATACCGCACAGGGAGGGGGTGCACAAGGCGTCAAAT
CCATGGGACCTTTGAAGGGTCAGACGTGTGATTCCCAGACCAAGTCGGGA
CAGCAAGGCTCCACTACGCAGGGTAACAAATGAAGTAAACGGAAGGTAGC
CATTTTCTTTACAACGTGGATTTGCGCATGTAAAAGTAACCAGGCAGTAT
GTGGCATTGGTTATCAAGGTTTAAGTAAAAAACGTTGTGAACATCACGTG
ATCTTTTCCCGATGTTTAAACTACTGGAGAATCTTTTTACGATAACCGTA
CATATCTTATATATTTTGCAACCTAAACTAGCGTTCAAAATGAAAACACA
TTTTTCTCCAGTAACTTAATTGTAAGTGTATTTTGTAGCTGTGACAAGGC
AGTACGTTTGCTTTTGTCGTCCGTTCTCTAGACACAGTCGTAACTAACGA
AACTATGAAGTTAGTAATACATTTCTACCGGTGTGTTCTTCGCTCATACC
TTTGGTTTTTGTCATTCGTTAAAACTTGAAAGGCTTATCAACCCTAGGAA
CATTGATAAGGCATCCAACCAGAATTTTTTTGCCATTTTTTGTTAAAAAA
ATCATTCCTGGATTTCATGGCAGTTCCTTCAATTCAACTTAGACTTAGGA
TACAATCCTTTGCCTTTGTGAATCTGGTATATATAACTACTTGTGGCCTA
ACTATAGGTTGCCGAATAGTTTTGCTCTATGGTATTTCATAGGTCACTAG
CGCAGTTAGATTACTTGATGCCCGTTTATCCCGAATACTACATTTTACAA
CACGAGGTCCAATTGGTCGTTTGAAGGAAAACAGCTAGGTGCAATGGCGG
TATATAGGTCTATCATGAAGCATATCCATTAAATTTGCAATGGTGTTGCT
ATTTGCGTGGACCATGTGATGGGAAAATGTGCCTAGAAAACCAATTTGTC
CTGTGTGTATAGTAGATACTTTTTAATAAACATTCGGGTGCCCCGTGCTA
TGTCAGTTAAAAGTGCATCGCGCACACCATTGTACGTCGATATACCGCAT
CTTGTTCAATGAACAAATCTAAGTTAACCATCAATTTCTTTATTCAGACG
ACAAACTGCCCACTCAGGGAAACCATCATAATGAACCAACCAACGAACCA
ACGAACCAACGAACTAACCAACCAACCAACGAACTAACCAAACAACCAAA
CAACCAACGAACCAACCAACCAACCAACCAACCAACCAACAATCCAATCA
ACCAACGAACCAACCAACCAACCATCCAACCAACCAACCAACCAACCAAC
CAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCA
ACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAAC
CAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCA
ACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAAC
CAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCA
ACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAAC
CAACCAACCAACCAACCAACCAACCAACCATCCAACCAACCAACCAAACA
AACAACCGACCAATCAACAAGCTAACCAACCAACAAACCAGCAAACAAAA
AAACATTTAAAAACAAACTGACTAGTGATTTGTGGGCGAAATTATGTACG
TGGAATAAAC Coding sequence (CDS) from alignment at Sc0000026:1251015..1258624+ >transcript:BL73303_cuf1 ID=transcript:BL73303_cuf1|Name=transcript:BL73303_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1176bp|location=Sequence derived from alignment at Sc0000026:1251015..1258624+ (Branchiostoma lanceolatum)
ATGGTAGCAGACGACAAACTGCCCACTCAGGGAAACCATCATAATGAACC
AACCAACGAACCAACGAACCAACGAACTAACCAACCAACCAACGAACTAA
CCAAACAACCAAACAACCAACGAACCAACCAACCAACCAACCAACCAACC
AACAATCCAATCAACCAACGAACCAACCAACCAACCATCCAACCAACCAA
CCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACC
AACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAA
CCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACC
AACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAA
CCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACC
AACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAA
CCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCATCCAACC
AACCAACCAAACAAACAACCGACCAATCAACAAGCTAAATGGTAGCAGAC
GACAAACTGCCCACTCAGGGAAACCATCATAATGAACCAACCAACGAACC
AACGAACCAACGAACTAACCAACCAACCAACGAACTAACCAAACAACCAA
ACAACCAACGAACCAACCAACCAACCAACCAACCAACCAACAATCCAATC
AACCAACGAACCAACCAACCAACCATCCAACCAACCAACCAACCAACCAA
CCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACC
AACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAA
CCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACC
AACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAA
CCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACC
AACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAA
CCAACCAACCAACCAACCAACCAACCAACCATCCAACCAACCAACCAAAC
AAACAACCGACCAATCAACAAGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000026 | genome | Sc0000026:1251015..1258624 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73303_cuf1 |
| Biotype | protein_coding |
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