|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73306_cuf0 >transcript:BL73306_cuf0-protein ID=transcript:BL73306_cuf0-protein|Name=transcript:BL73306_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=128bp
MAQGYKYGGPDRGDNEDFDPNRNTGPTVQGYKYQPGVPSAPTDLRWEVQS
HGKATVYWTLPSGQGVTSVKVQLWKPEGSEWKKFDEKNFGNSTQAVGVLI
SGPWENHLVQVQAINNFGIGKAASIRLV Run BLAST on NCBI mRNA from alignment at Sc0000026:1220534..1223612+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73306_cuf0 ID=transcript:BL73306_cuf0|Name=transcript:BL73306_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3079bp|location=Sequence derived from alignment at Sc0000026:1220534..1223612+ (Branchiostoma lanceolatum)
CAGTATGAAGACACTGGTACGTTTTGCAGTTGTTTTTTCTAAGCCTTTTT
TTCTGTTAGCAATCTATCCCATGAGTCTTCATGTGCTTTGTACTGTGACG
TAGGTTAGAATAAAAACGAGCGCAAGCTTTTCAATAAACACCGTCAAGTA
GACCAGAGGTTACATACACCACTTTTTCGGATACTTAAAGAACAATAAGA
TCATGGCGCAGGGGTACAAATACGGCGGCCCAGACAGAGGAGATAATGAA
GACTTCGACCCAAATCGCAACACAGGGCCGACGGTACAGGGCTATAAGTA
CCAGCCTGGAGGTAAGGTGGCAAGCCGCGACGGTAAAAACAGGAAGACAT
AAAAGACAAATATATAGGAACGTTTGCATCTATTAACTGTAATTGTCCTC
AAGAAGATCAACGATAAAACAGTAGATGTTCTCAAGACTATACCGAACAG
CCATGTTAAAAAAAAAAAGAATCGCAATTGTCGGCAAAGACGAGCTTGTT
AAACCCCCACCCCACTTTTTTATGAGAGATTGTTTCCCTAAGAAAGGCGC
CCAAAGTCAAAGATAGAGAAACGCTCTAATTCTATATATCATAATGAAGT
ATATGCAAGATACGCAGAGATAGCATACCAGGTACTTTCTCAAACATACC
GAATTTGGCCCCGAAATTTCTAGAATATACCGAGAATCTTTCCTCAAAAC
GTCCGCGAAGACGACGACGACAAAAAGACAATTCCCCACCCCGCCATTTT
GTCAGAAAAAAAAAAACTGTCGCAACAATGATTCTAAAAAGGTCTATGAG
TGTGTTTGTTCGATCGTGTCTAGATTAATGTAACGCTTTCTCGTTGTTGT
TTAATTCACAGTTCCTTCGGCTCCCACCGATTTGAGGTGGGAAGTCCAGT
CGCACGGAAAGGCAACTGTGTACTGGACGCTACCGTCTGGTCAAGGCGTC
ACTTCAGTCAAAGTTCAGCTTTGGAAGCCAGAGGGCTCCGAATGGAAGAA
ATTTGACGAGAAGAATTTTGGTAACAGCACTCAAGCAGTTGGCGTCCTAA
TCAGTGGTCCTTGGGAAAACCACTTAGTGCAAGTACAGGCCATCAACAAC
TTCGGAATAGGAAAGGCTGCGAGTATTAGGTACTACGAATATTTGATCTT
AATTGAAATGTTTGAGTTGGGTAACCCCATGGCACCCTAATATTCAACCG
AAAGTGTTGCTTTTTTTTACCAAATACGACATTAAAATTCCGAAGAAACA
AATAAAAATCATACGTATGGATCCTATTTTTTGCATGATTCCTCCCAAGG
TATTTGGATGTACTGTATCGTGAATGTATGTTTAATAACATCATCCTATT
GCCACACTCTTACATATGCCCGTCTAGGTTATCCTAAATTGGAATGTAAG
CGATTAGAATGGGACATATCTTCAAACTGTGAAAAATGATTTGGGTTTGA
ATTATTTTCCGTAACACAAAGACGTGTATCGTGAAATTAACATAGCACAG
ATTAAGAGTTATGGTCTAAAGACAATCGACAGTACGAAAAACCAATTCAT
GAAGCGTCAAATTTCCTTGTTTACATTAAACGACATGAAAACCACTTCAA
ACCGACAGCTTTACACAGCATTAAGTAAACCCTCTGACTGTAGATCATCC
AAGTGCAAAACTTAACGTAGCTTGCAAAGTTTTCTAATTAGACAATTTTC
TGCTCGCTTTTGTCAAAATTCACCACCCAGTAGGTTATCAAAATTTTTAA
CAGATGTAAGCTAGCACTAGTTCGTGAAAAAAAGAATGATTTTGACATAT
ATATGGATAAACATATTGTTGATATTTTTTCCACAGGCTTGTATAAATGT
AGCTGCTTGTTGACAGGCGATTCAGAAAGCTGTGAACTTCTACCACGGCC
ATTGGACCATCATATTAAGAAGTCAAACCCAATAAGCTAGAATTCAGATT
CAGCATTCAGAATAGAGTAGTCACATGATACACTGTTCTATAAATGCATT
ATCAAGTATATGCTTGAAAAATGAAATAGCTGTACTTCTTTGTAGTTTTG
TAGTATTGGCTATGATAGATAGTAATATGAAATTGTCAAACAGAATATAC
TGAACCAACCCCATAGCTTCTCTATGCTATTATTCAACACAGTCTAAAAC
AACATATTTATATACATATTGTATAATATGTATCTACTTGCTCACTAACT
GTATGCTAAATATACTATAATAGAACGTACTGAAACAATTGTATCTTTAG
AATACTACAAACGTATGCCTTCTGTTCGTTCATTTAGTTATTATACTGTA
AAACAGGGAAATATATCGAGGGCATATGATATATATATCATTGCACTAAC
TATATATATGATAAATCCGGCGTTATCTAATATGTCAGGGATAACAAAAG
GTCCTAAGAAAACTATCTATAATCTATAACCCTCGTTATTGTGGACTGAT
ATCACCTATGGTATCTGTAAGTTATATTCTATAATGATTTCTACACATGT
CAAGATGGTTGCATATCACTTCTCTGTTTGTATACCAAGTTGGCACCTTT
TCATACTGAGTATTCAACTAAATATAATTTTGTGCGAAGAAAAGACATAC
AACGAAACGATATCACTTATGATATCTGTATTTATATTTCATAAAGATAT
CTACACAAGATGTATAAATATCACTCCTCTGTTGTTATAACGATTTTAAC
ATCAAGCATTCAAGTCGATGTATTTTTTCTGAGGACTGGAAATTGTTGCA
TAATGCTTCAATGTTATACCAGTGTTACAAAAATCCTGCTGATAAATTTT
GCATATATTTTCTAGGGTAGGTCTGGTACTGAATTGCAAAACACACGTTA
GATTTTAAGTTTATCTTTTCACCATTACCTGTTAGTCGTTTTATAAGTCA
TTCTTGATGTGGTTGGTGTGGATATAAGTTAATACTGCTATTATCACACT
GTATTTGTTTGAATCAATTATCAAAATACATGTTAGATGTTCAGAGTTAG
CCTTATGTGTTCTTTTGCCTAGACTTTAGTTTTAGTACTCTTAAATCGAT
AGAATTTTCATATTATCAATGGTTTGTAG Coding sequence (CDS) from alignment at Sc0000026:1220534..1223612+ >transcript:BL73306_cuf0 ID=transcript:BL73306_cuf0|Name=transcript:BL73306_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1161bp|location=Sequence derived from alignment at Sc0000026:1220534..1223612+ (Branchiostoma lanceolatum)
ATGGCGCAGGGGTACAAATACGGCGGCCCAGACAGAGGAGATAATGAAGA
CTTCGACCCAAATCGCAACACAGGGCCGACGGTACAGGGCTATAAGTACC
AGCCTGGAGTTCCTTCGGCTCCCACCGATTTGAGGTGGGAAGTCCAGTCG
CACGGAAAGGCAACTGTGTACTGGACGCTACCGTCTGGTCAAGGCGTCAC
TTCAGTCAAAGTTCAGCTTTGGAAGCCAGAGGGCTCCGAATGGAAGAAAT
TTGACGAGAAGAATTTTGGTAACAGCACTCAAGCAGTTGGCGTCCTAATC
AGTGGTCCTTGGGAAAACCACTTAGTGCAAGTACAGGCCATCAACAACTT
CGGAATAGGAAAGGCTGCGAGTATTAGGCTTGTATAAATGGCGCAGGGGT
ACAAATACGGCGGCCCAGACAGAGGAGATAATGAAGACTTCGACCCAAAT
CGCAACACAGGGCCGACGGTACAGGGCTATAAGTACCAGCCTGGAGTTCC
TTCGGCTCCCACCGATTTGAGGTGGGAAGTCCAGTCGCACGGAAAGGCAA
CTGTGTACTGGACGCTACCGTCTGGTCAAGGCGTCACTTCAGTCAAAGTT
CAGCTTTGGAAGCCAGAGGGCTCCGAATGGAAGAAATTTGACGAGAAGAA
TTTTGGTAACAGCACTCAAGCAGTTGGCGTCCTAATCAGTGGTCCTTGGG
AAAACCACTTAGTGCAAGTACAGGCCATCAACAACTTCGGAATAGGAAAG
GCTGCGAGTATTAGGCTTGTATAAATGGCGCAGGGGTACAAATACGGCGG
CCCAGACAGAGGAGATAATGAAGACTTCGACCCAAATCGCAACACAGGGC
CGACGGTACAGGGCTATAAGTACCAGCCTGGAGTTCCTTCGGCTCCCACC
GATTTGAGGTGGGAAGTCCAGTCGCACGGAAAGGCAACTGTGTACTGGAC
GCTACCGTCTGGTCAAGGCGTCACTTCAGTCAAAGTTCAGCTTTGGAAGC
CAGAGGGCTCCGAATGGAAGAAATTTGACGAGAAGAATTTTGGTAACAGC
ACTCAAGCAGTTGGCGTCCTAATCAGTGGTCCTTGGGAAAACCACTTAGT
GCAAGTACAGGCCATCAACAACTTCGGAATAGGAAAGGCTGCGAGTATTA
GGCTTGTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:1220534..1223612 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73306_cuf0 |
| Biotype | protein_coding |
|
