|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73479_cuf0 >transcript:BL73479_cuf0-protein ID=transcript:BL73479_cuf0-protein|Name=transcript:BL73479_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=302bp
SEASMVTSEPTSEASIVTTTESTSISSTIAAEFTSKSSTVTTKPTSTVST
VTEKFTSGASKATTESTSEASTVTTKPTTEASTVIKEPTSEAQTATGGTA
EPTTEASTATTEPISEVSTVTTEPTSEVSTVTTEPTSKASTVTTEPTSEA
SIVTTTESTPETSTATTEPTSGASTVTTKYTPQVSTTSAEPTTEASTVAT
EPTSEASTVTTKPTSEPSTATTEPTSGASTVTTKSTSKVSKTSTELTSKA
STVTTEPTSEASTVTTKPTSEASTATTQPTSEASENKSGSSITMTTITYR
GR Run BLAST on NCBI mRNA from alignment at Sc0000058:1658017..1659216+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73479_cuf0 ID=transcript:BL73479_cuf0|Name=transcript:BL73479_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1200bp|location=Sequence derived from alignment at Sc0000058:1658017..1659216+ (Branchiostoma lanceolatum)
TTCTGAGGCGTCAATGGTCACTTCAGAACCAACTTCAGAGGCGTCAATAG
TCACTACTACAGAATCCACATCTATATCGTCTACCATCGCTGCAGAATTC
ACATCTAAGTCGTCAACGGTCACTACAAAACCCACCTCTACGGTGTCAAC
GGTCACTGAGAAATTCACCTCGGGGGCGTCAAAAGCCACTACAGAATCCA
CCTCTGAGGCGTCAACGGTCACCACAAAACCCACCACAGAGGCGTCAACG
GTCATTAAAGAACCCACCTCTGAAGCGCAAACGGCCACTGGCGGCACTGC
AGAACCCACCACTGAGGCGTCAACGGCCACTACAGAACCCATCTCTGAGG
TGTCAACGGTCACTACAGAACCCACCTCTGAGGTGTCAACGGTCACTACA
GAACCAACCTCTAAGGCGTCAACGGTCACCACAGAACCAACTTCTGAAGC
GTCAATAGTCACTACAACAGAATCCACCCCTGAGACGTCCACGGCCACTA
CAGAACCCACCTCTGGGGCGTCAACGGTCACTACTAAATACACCCCTCAG
GTGTCAACGACCAGTGCCGAACCCACCACTGAGGCGTCAACAGTGGCTAC
AGAACCAACATCTGAGGCGTCAACGGTCACTACAAAACCGACTTCTGAGC
CGTCAACGGCCACTACAGAACCAACCTCTGGGGCGTCAACGGTCACTACT
AAATCCACCTCTAAGGTGTCAAAGACCAGTACAGAACTCACCTCTAAGGC
GTCAACAGTGACTACAGAACCAACATCTGAGGCGTCAACGGTCACTACAA
AACCGACTTCTGAGGCGTCAACGGCCACTACACAGCCTACCTCTGAGGCG
TCAGAAAGTGAGTTAGATTTCACGTTGTTTCAGGATATTCATACAGCTGT
CAAATTCTCGTCTACCAAGAGCTATCGTGCGTTGGATACTAGTACTTAAG
CATTGTGTCTGTCAGCAAGTATCCACACACTGATACGTCAAAGTTAAAAA
AAAAAAGAACTTCAAAACTCATTTTGTTCTTTATCTTTACACTCTGATCT
GAATCCGTCTTCCTTGCCCCCTCTTGTCTGTTCTTCATGTATGTGTTCTT
CTTTGATATCCATATTCCTTTATGAGCACGACCAAGATAAATCCGGTTCC
TCCATCACAATGACCACCATTACATATCGAGGCAGATAGATCGATGAAAC
Coding sequence (CDS) from alignment at Sc0000058:1658017..1659216+ >transcript:BL73479_cuf0 ID=transcript:BL73479_cuf0|Name=transcript:BL73479_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1818bp|location=Sequence derived from alignment at Sc0000058:1658017..1659216+ (Branchiostoma lanceolatum)
TCTGAGGCGTCAATGGTCACTTCAGAACCAACTTCAGAGGCGTCAATAGT
CACTACTACAGAATCCACATCTATATCGTCTACCATCGCTGCAGAATTCA
CATCTAAGTCGTCAACGGTCACTACAAAACCCACCTCTACGGTGTCAACG
GTCACTGAGAAATTCACCTCGGGGGCGTCAAAAGCCACTACAGAATCCAC
CTCTGAGGCGTCAACGGTCACCACAAAACCCACCACAGAGGCGTCAACGG
TCATTAAAGAACCCACCTCTGAAGCGCAAACGGCCACTGGCGGCACTGCA
GAACCCACCACTGAGGCGTCAACGGCCACTACAGAACCCATCTCTGAGGT
GTCAACGGTCACTACAGAACCCACCTCTGAGGTGTCAACGGTCACTACAG
AACCAACCTCTAAGGCGTCAACGGTCACCACAGAACCAACTTCTGAAGCG
TCAATAGTCACTACAACAGAATCCACCCCTGAGACGTCCACGGCCACTAC
AGAACCCACCTCTGGGGCGTCAACGGTCACTACTAAATACACCCCTCAGG
TGTCAACGACCAGTGCCGAACCCACCACTGAGGCGTCAACAGTGGCTACA
GAACCAACATCTGAGGCGTCAACGGTCACTACAAAACCGACTTCTGAGCC
GTCAACGGCCACTACAGAACCAACCTCTGGGGCGTCAACGGTCACTACTA
AATCCACCTCTAAGGTGTCAAAGACCAGTACAGAACTCACCTCTAAGGCG
TCAACAGTGACTACAGAACCAACATCTGAGGCGTCAACGGTCACTACAAA
ACCGACTTCTGAGGCGTCAACGGCCACTACACAGCCTACCTCTGAGGCGT
CAGAAAATAAATCCGGTTCCTCCATCACAATGACCACCATTACATATCGA
GGCAGATAGTCTGAGGCGTCAATGGTCACTTCAGAACCAACTTCAGAGGC
GTCAATAGTCACTACTACAGAATCCACATCTATATCGTCTACCATCGCTG
CAGAATTCACATCTAAGTCGTCAACGGTCACTACAAAACCCACCTCTACG
GTGTCAACGGTCACTGAGAAATTCACCTCGGGGGCGTCAAAAGCCACTAC
AGAATCCACCTCTGAGGCGTCAACGGTCACCACAAAACCCACCACAGAGG
CGTCAACGGTCATTAAAGAACCCACCTCTGAAGCGCAAACGGCCACTGGC
GGCACTGCAGAACCCACCACTGAGGCGTCAACGGCCACTACAGAACCCAT
CTCTGAGGTGTCAACGGTCACTACAGAACCCACCTCTGAGGTGTCAACGG
TCACTACAGAACCAACCTCTAAGGCGTCAACGGTCACCACAGAACCAACT
TCTGAAGCGTCAATAGTCACTACAACAGAATCCACCCCTGAGACGTCCAC
GGCCACTACAGAACCCACCTCTGGGGCGTCAACGGTCACTACTAAATACA
CCCCTCAGGTGTCAACGACCAGTGCCGAACCCACCACTGAGGCGTCAACA
GTGGCTACAGAACCAACATCTGAGGCGTCAACGGTCACTACAAAACCGAC
TTCTGAGCCGTCAACGGCCACTACAGAACCAACCTCTGGGGCGTCAACGG
TCACTACTAAATCCACCTCTAAGGTGTCAAAGACCAGTACAGAACTCACC
TCTAAGGCGTCAACAGTGACTACAGAACCAACATCTGAGGCGTCAACGGT
CACTACAAAACCGACTTCTGAGGCGTCAACGGCCACTACACAGCCTACCT
CTGAGGCGTCAGAAAATAAATCCGGTTCCTCCATCACAATGACCACCATT
ACATATCGAGGCAGATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000058 | genome | Sc0000058:1658017..1659216 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73479_cuf0 |
| Biotype | protein_coding |
|
