transcript:BL75739_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL75739_cuf0
Unique Nametranscript:BL75739_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL75739_cuf0

>transcript:BL75739_cuf0-protein ID=transcript:BL75739_cuf0-protein|Name=transcript:BL75739_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=108bp
LPYRNSHTGYVHEEGLPYRNSHTGYVHEEGLPHRNSHPGYVHEEGLPHRN
SHPGYVHEEGLPYRNTHTWYVHEEGLPYWNSHPGYVTHIGTHHIGTHIPG
MGLYLYVL
Run BLAST on NCBI

mRNA from alignment at Sc0000178:453540..454081-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL75739_cuf0 ID=transcript:BL75739_cuf0|Name=transcript:BL75739_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=542bp|location=Sequence derived from alignment at Sc0000178:453540..454081- (Branchiostoma lanceolatum)
CTACCATATAGGAACTCACATACCGGGTATGTACACGAGGAAGGTCTACC
ATATAGGAACTCACATACCGGGTATGTACACGAGGAAGGTCTACCACATA
GGAACTCACATCCCGGGTATGTACACGAGGAAGGTCTACCACATAGGAAC
TCACATCCCGGGTATGTACACGAGGAAGGTCTACCATATAGGAACACACA
TACCTGGTATGTACACGAGGAAGGTCTACCATATTGGAACTCACATCCCG
GTTACGTTACCCATATAGGAACACACCATATAGGAACTCACATACCTGGT
ATGGGCTTGTATCTGTATGTATTGTAGTCACTGTAGTCAGTATAAACACC
CTTTGGCAAATCTGAAAGGGATACTGATCCAGTTTAGCTCGCTGAAGAGC
TATAATTCTTCCACTCCCTGACAGAGAAGACAGACGCTATGTATATATTC
ACAGATTCATTGTACCAACCGTACCCCCATGTCCTAACGACACAGCCTGG
ATCGAACTCACGGCTTCTAGTTCCAGAGGCAGGGCCACAAAG

Coding sequence (CDS) from alignment at Sc0000178:453540..454081-

>transcript:BL75739_cuf0 ID=transcript:BL75739_cuf0|Name=transcript:BL75739_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=327bp|location=Sequence derived from alignment at Sc0000178:453540..454081- (Branchiostoma lanceolatum)
CTACCATATAGGAACTCACATACCGGGTATGTACACGAGGAAGGTCTACC
ATATAGGAACTCACATACCGGGTATGTACACGAGGAAGGTCTACCACATA
GGAACTCACATCCCGGGTATGTACACGAGGAAGGTCTACCACATAGGAAC
TCACATCCCGGGTATGTACACGAGGAAGGTCTACCATATAGGAACACACA
TACCTGGTATGTACACGAGGAAGGTCTACCATATTGGAACTCACATCCCG
GTTACGTTACCCATATAGGAACACACCATATAGGAACTCACATACCTGGT
ATGGGCTTGTATCTGTATGTATTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL75739gene:BL75739Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL75739_cuf0-E1BL75739_cuf0-E1-1564476830-369649Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL75739_cuf0transcript:BL75739_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000178genomeSc0000178:453540..454081 -
Properties
Property NameValue
Transcript idBL75739_cuf0
Biotypeprotein_coding