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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75771_cuf0 >transcript:BL75771_cuf0-protein ID=transcript:BL75771_cuf0-protein|Name=transcript:BL75771_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=196bp
MDTKRRKTAHGTDGSTKRKRRNSASESKPIPDGSPSRDAMEITIDGVVIK
GYHKFKRRPPMGLRMSVVPEPDNPYDPNALTVEMPGLEDLPAQVRNVVTD
PKRGTTVKSLAGKCIGRLPGSLASVLSHMSSEIELEGMTCVAKGPPCPSF
FPWPLMHQKGGGAVIPCELHVRATHNKERAMAKLQEGFGDMGPEKA Run BLAST on NCBI mRNA from alignment at Sc0000009:4924315..4926395+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75771_cuf0 ID=transcript:BL75771_cuf0|Name=transcript:BL75771_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2081bp|location=Sequence derived from alignment at Sc0000009:4924315..4926395+ (Branchiostoma lanceolatum)
TGTTATACCTTACCATACACAATCTACTTATTTATTTTAAATCTAAAGTA
AAGGCAACTTTGCTTGGTGTATGACTTGATGACAGTTCTCCAGACGAAGC
GGGCCGGATCATGCATGTGGCGCAGACTAGACTCATGCCGTCATGGCGCC
GTTTCGTTTTCTTCTTTACAGACACTTCATGGCAATGTGTTTGTGTTATA
AACTCAATTTTCAACAAAAACAAACAGTGTGTTTTTTTACTGATTTCGTG
CACATTATTCCGTCACACCAATTAAATACCCATCATGTTTTCCCGCCTAT
TAGAAACATAATAGGCGATTAGTGTAATTTGTCACAGTGCGATACCGTAC
CAACATGTCTTCTCAGCTGGATGGCATCAAACCCACGTGCCACCATGTGA
CAAGAACTGGTGTTCATTAGACCCTTGACTTGTCAATACAGTATCTGCCT
TCCAAGTTGCATCACAGTAACGAAGGTCTGACTTGTAGCGTGTGTTAAGT
ACAGTACATTCTGGTTTTCACTCCTTGGTCTAAATCTGCAGTACAGTACT
AGTGAATTGTCCGTATCCCCGATCGTTCGTGAACTTGCGGGTCGAAGATG
GATACAAAGCGCAGTGAGTAAAGATTTTTCTTATTTGCATTATGTAATGA
CGCGGCGCTAAACGCGTAACTGCATGACAGATTTGTTTTTCTTGTCCAAG
CTATCTTACCAATATTGAACCCAAGACAAGAAATCAACGGTTTAAAGACG
TTGTTGTATTGAACTAGCCTGGGTACCATCCTCCTTCGTAACCGCTGGCC
AAAAAAAAAAACGCTTGTTAACCACGATTTTTAAGCGGTTACTACGGAGG
ATGGTACACGCTAGTATAAACAAAAAATGAATGTACTGTAGATGGATTTT
GATCCAGGTATGTTTTCTGTTACAAGTTCCTAACATACTCACATTAGGCT
ACTGTGGTGCAAATTCCACACCTTTTTTCGGCCATACGCATATATTTATG
GCGGACAAATATTTCCCTTTCTTAGGAAAGACCGCTCACGGCACAGACGG
TAGCACCAAGCGTAAGAGGAGAAATTCCGCTTCGGAATCGAAGCCAATTC
CTGACGGAAGCCCGTCCCGTGACGCAATGGAGATAACAATAGACGGTGTC
GTTATCAAGGGGTAAGTTGTGATTTACTGATCACACGTGCACTTCCGTGT
TTCCCGGGAACGAAAACTTTGTTTTTGATTGCTTTGTGCTGTGAGATGTT
TCACTGATTCTCCTTTCGGGTAATGGCTATACAGTACCAGCAAAATATAA
CTGTATTCAGTGGAAGGACAAAATCATTAATGAAGTGGCGTTTGCATTTA
TTCAGGTATCATAAATTCAAGCGGCGTCCGCCGATGGGACTCCGCATGAG
CGTAGTTCCTGAGCCCGACAACCCCTACGACCCGAACGCCCTCACCGTGG
AAATGCCCGGGTTGGAAGACCTCCCAGCCCAAGTTCGAAACGTCGTGACC
GACCCAAAACGTGGCACGACGGTCAAGAGCCTAGCGGGGAAGTGCATCGG
CCGCTTACCCGGGAGCCTGGCCTCGGTCCTCAGCCACATGTCATCGGAGA
TCGAGTTAGAGGGAATGACATGGTGAATATGTTTTTAACGCTGAAGGGGG
ATTTGTGAAAAGCAATGTAAATGCGTGTGTTGATGTGTTTGTGTGTTTTT
TTGCGGTCAGTTTTTCCAGTTAAATCCAGGGATCATAAGTATGCCATTGG
AGGGGCGAGGGGCATCTGATTTTCGTATTAGAGAACAGAGCACGGTACTG
TACTGTACTTCCATTTCCAAACATACTGTACCAATACTGTTTCCATTCAT
GATTGCACTGATACTTCTGTGGTGAGAAATTGATCGATCTCCCCTTGTCT
CGCAAATTTAGCGTGGCCAAGGGTCCGCCTTGTCCTAGCTTCTTCCCATG
GCCCCTGATGCACCAGAAAGGGGGCGGAGCTGTCATTCCGTGTGAGCTCC
ACGTGCGAGCTACCCACAACAAAGAGCGGGCGATGGCCAAACTACAGGAG
GGTTTCGGCGACATGGGGCCCGAGAAAGCTG Coding sequence (CDS) from alignment at Sc0000009:4924315..4926395+ >transcript:BL75771_cuf0 ID=transcript:BL75771_cuf0|Name=transcript:BL75771_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2352bp|location=Sequence derived from alignment at Sc0000009:4924315..4926395+ (Branchiostoma lanceolatum)
ATGGATACAAAGCGCAGAAAGACCGCTCACGGCACAGACGGTAGCACCAA
GCGTAAGAGGAGAAATTCCGCTTCGGAATCGAAGCCAATTCCTGACGGAA
GCCCGTCCCGTGACGCAATGGAGATAACAATAGACGGTGTCGTTATCAAG
GGGTATCATAAATTCAAGCGGCGTCCGCCGATGGGACTCCGCATGAGCGT
AGTTCCTGAGCCCGACAACCCCTACGACCCGAACGCCCTCACCGTGGAAA
TGCCCGGGTTGGAAGACCTCCCAGCCCAAGTTCGAAACGTCGTGACCGAC
CCAAAACGTGGCACGACGGTCAAGAGCCTAGCGGGGAAGTGCATCGGCCG
CTTACCCGGGAGCCTGGCCTCGGTCCTCAGCCACATGTCATCGGAGATCG
AGTTAGAGGGAATGACATGCGTGGCCAAGGGTCCGCCTTGTCCTAGCTTC
TTCCCATGGCCCCTGATGCACCAGAAAGGGGGCGGAGCTGTCATTCCGTG
TGAGCTCCACGTGCGAGCTACCCACAACAAAGAGCGGGCGATGGCCAAAC
TACAGGAGGGTTTCGGCGACATGGGGCCCGAGAAAGCTATGGATACAAAG
CGCAGAAAGACCGCTCACGGCACAGACGGTAGCACCAAGCGTAAGAGGAG
AAATTCCGCTTCGGAATCGAAGCCAATTCCTGACGGAAGCCCGTCCCGTG
ACGCAATGGAGATAACAATAGACGGTGTCGTTATCAAGGGGTATCATAAA
TTCAAGCGGCGTCCGCCGATGGGACTCCGCATGAGCGTAGTTCCTGAGCC
CGACAACCCCTACGACCCGAACGCCCTCACCGTGGAAATGCCCGGGTTGG
AAGACCTCCCAGCCCAAGTTCGAAACGTCGTGACCGACCCAAAACGTGGC
ACGACGGTCAAGAGCCTAGCGGGGAAGTGCATCGGCCGCTTACCCGGGAG
CCTGGCCTCGGTCCTCAGCCACATGTCATCGGAGATCGAGTTAGAGGGAA
TGACATGCGTGGCCAAGGGTCCGCCTTGTCCTAGCTTCTTCCCATGGCCC
CTGATGCACCAGAAAGGGGGCGGAGCTGTCATTCCGTGTGAGCTCCACGT
GCGAGCTACCCACAACAAAGAGCGGGCGATGGCCAAACTACAGGAGGGTT
TCGGCGACATGGGGCCCGAGAAAGCTATGGATACAAAGCGCAGAAAGACC
GCTCACGGCACAGACGGTAGCACCAAGCGTAAGAGGAGAAATTCCGCTTC
GGAATCGAAGCCAATTCCTGACGGAAGCCCGTCCCGTGACGCAATGGAGA
TAACAATAGACGGTGTCGTTATCAAGGGGTATCATAAATTCAAGCGGCGT
CCGCCGATGGGACTCCGCATGAGCGTAGTTCCTGAGCCCGACAACCCCTA
CGACCCGAACGCCCTCACCGTGGAAATGCCCGGGTTGGAAGACCTCCCAG
CCCAAGTTCGAAACGTCGTGACCGACCCAAAACGTGGCACGACGGTCAAG
AGCCTAGCGGGGAAGTGCATCGGCCGCTTACCCGGGAGCCTGGCCTCGGT
CCTCAGCCACATGTCATCGGAGATCGAGTTAGAGGGAATGACATGCGTGG
CCAAGGGTCCGCCTTGTCCTAGCTTCTTCCCATGGCCCCTGATGCACCAG
AAAGGGGGCGGAGCTGTCATTCCGTGTGAGCTCCACGTGCGAGCTACCCA
CAACAAAGAGCGGGCGATGGCCAAACTACAGGAGGGTTTCGGCGACATGG
GGCCCGAGAAAGCTATGGATACAAAGCGCAGAAAGACCGCTCACGGCACA
GACGGTAGCACCAAGCGTAAGAGGAGAAATTCCGCTTCGGAATCGAAGCC
AATTCCTGACGGAAGCCCGTCCCGTGACGCAATGGAGATAACAATAGACG
GTGTCGTTATCAAGGGGTATCATAAATTCAAGCGGCGTCCGCCGATGGGA
CTCCGCATGAGCGTAGTTCCTGAGCCCGACAACCCCTACGACCCGAACGC
CCTCACCGTGGAAATGCCCGGGTTGGAAGACCTCCCAGCCCAAGTTCGAA
ACGTCGTGACCGACCCAAAACGTGGCACGACGGTCAAGAGCCTAGCGGGG
AAGTGCATCGGCCGCTTACCCGGGAGCCTGGCCTCGGTCCTCAGCCACAT
GTCATCGGAGATCGAGTTAGAGGGAATGACATGCGTGGCCAAGGGTCCGC
CTTGTCCTAGCTTCTTCCCATGGCCCCTGATGCACCAGAAAGGGGGCGGA
GCTGTCATTCCGTGTGAGCTCCACGTGCGAGCTACCCACAACAAAGAGCG
GGCGATGGCCAAACTACAGGAGGGTTTCGGCGACATGGGGCCCGAGAAAG
CT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000009 | genome | Sc0000009:4924315..4926395 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75771_cuf0 |
| Biotype | protein_coding |
|
