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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75775_cuf0 >transcript:BL75775_cuf0-protein ID=transcript:BL75775_cuf0-protein|Name=transcript:BL75775_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=210bp
MLSTQQTTVKTLTKPSAPISTQQPTTIPTTMYTSEHSKFPTSSAYTTMQT
SAVPTTQLPTTDISTAHTTRITHPPPTTKVNTTASEISTYSALNQTRFPP
TFPQLLHHLNLPCYTPPFYHILLIDKHNFHISATDNIPVNNAINAANNSE
AFHQTINTNIYPTADDYSHIIVQIRAFHFSYIVSSANYNTSYNRYFYCTH
YTDNTSTSNY Run BLAST on NCBI mRNA from alignment at Sc0000015:4343787..4348034- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75775_cuf0 ID=transcript:BL75775_cuf0|Name=transcript:BL75775_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=4248bp|location=Sequence derived from alignment at Sc0000015:4343787..4348034- (Branchiostoma lanceolatum)
ACTTATAGTGCTTTGAAGCAAACACGTTTTCCTCCAACATTTCCACAATT
GTTACATCACTTAATCTTACCATGCTATACACCACCTTTTCCATCACGTA
TTACCAATAGATAAGCACAATTTCCACATCTCTGCAACCGACAACATCCC
AGTCAACAATGCAATCAACGCAGCAAACAACAGTGAAGCCTTCCACCAAA
CCATCAACACCAATATCTACCCAACAGCCGACGACTATTCCCACATCATT
GTACAAATCAGAGCATTCCACTTTTCCTACATCGTCAGCTCTGCCAACTA
CAATACTTCCTACAACAGATATTTCTACTGCACACACTACACGGATAACA
CATCCACCTCCAACTACTAAGGTAAACACTACAGCATCTGAAATATCAAC
TTATAGTGCCTTGAACCAAACACGTTTTCCTCCAACATTTCCACAATTGT
TACATCACTTAAACTTACCATGCTATACACCACCTTTCTATCACATTTTA
CTAATAGATAAGCACAATTTCCACATCTCTGCAACCGACAACATCCCAGT
CAACAATCCAATCAACGCAGCAAACAACAGTGAAGCCTTCCACCAAACCA
TCAACACCAATATCTACCCAACAGCCGACGACTATTCCCACATCATTGTA
CAAATCAGAGCATTCCACTTTTCCTACATCGTCAGCTCTGCCAACTACAA
TACTTCCTACAACAGATATTTCTACTGCACACACTACACGGATAACACAT
CCACCTCCAACTACTAAGGTAAACACTACAGCATCTGAAATATCAACTTA
TAGTGCCTTGAACCAAACACGTTTTCCTCCAACATTTCCACAATTGTTAC
ATCACTTAAACTTACCATGCTATACACCACCTTTCTATCACATTTTACTA
ATAGATAAGCACAATTTCCACATCTCTGCAACCGACAACATCCCAGTCAA
CAAAGCAATCAACGCAGCAAACAACAGTGAAGCCTTCCGCCAAACCATCA
ACACCAATATCTACCCAACAGCCGACGACTATTCCCACATCATTGTACAA
ATCAGAGCATTCCACTTTTCCTACATCGTCAGCTCTGCCAAGTACAATAC
TTCCTACAACAGATATTTCTACTGCACACACTACACGGATAACACATCCA
CCTCCAACTACTAAGGTAAACACTACAGCATCTGAAATATCAACTTATAG
TGCCTTGAACCAAACACGTTTTCCTCCAACATTTCCACAATTGTTACATC
ACTTAAACTTACCATGCTATACCTCACCTTTCTATCACATTTTACTAATA
GATAAGCACAATTTCCACATCTCTGCAACCGACAACATCCCAGTCAACAA
TCCAATCAACGCAGCAAACAACAGTGAAGCCTTCCACCAAACCATCAACA
CCAATATCTACCCAACAGCCGACGACTATTCCCACATCATTGTACAAATC
AGAGCATTCCACTTTTCCTACATCGTCAGCTCTGCCAACTACAATACTTC
CTACAACAGATATTTCTACTGCACACACTACACGGATAACACAGCCACCT
CCAACTGCTAAGGTAAACACTACAGCATCTGAAATATCAACTTATAGTGC
CTTGAACCAAACACGTTTTCCTCCAACGTTTCCACAATTGTTACATCACT
TAAACTTACCATGCTATACACCACCTTTCTATCACATTTTACTAATAGAT
AAGCACAATTTCCACATCTCTGCAACCGACATCACAGTCAACAATGCTAT
CAACCCAGCAAACAACAGTGAAGACTTTAACCAAACCATCAGCACCAATA
TCTACCCAACAGCCGACGACTATTCCCACATCATTGTACACATCAGAGCA
TTCCACTTTTCCTACATTGTCAGCTCTGCCAAGTACAATACTTCCTACAA
CAGATATTTCTACTGCACACACTACACGGATAACAGATCCACCTCCAACT
ACTAAGGTAAACACAACAGCATCTGAAATATCAACTTATAGTGCCTTGAA
CCAAACACGTTTTCCTCCAACATGTCCATAATTGTTACATCACTTAAACT
TACCATGCTATACACCACCTTTCTATCACATTTTACTAATAGATAAGCAC
AATTTCCACATCTCTGCAACCGACAACATCCCAGTCAACAATGCAATCAA
CGCAGCAAACAACAGAAAAGCCTTCCACCAAACCATCAACACCAATATCT
ACCCAACAGCTGACGACTTTTCCCACAACAATGTACACATCAGAGCATTC
CAAGTTTCCTACATCATCAGCTTATACAACTATGCAAACATCAGCTGTCC
CAACTACTCAACTTCCTACAACAGATATTTCTACTGCACACACTACACGG
ATAACACATCCACCTCCAACTACTAAGGTGAACACTACAGCATCTGAAAT
ATCAACTTATAGTGCCTTGAACCAAACACGTTTTCCTCCAACATTTCCAC
AATTGTTACATCACTTAAACTTACCATGCTATACACCACCTTTCTATCAC
ATTTTACTAATAGATAAGCACAATTTCCACATCTCTGCAACCGACAACAT
CCCAGTCAACAATGCAATCAACGCAGCAAACAACAGTGAAGCCTTCCACC
AAACCATCAACACCAATATCTACCCAACAGCCGACGACTATTCCCACATC
ATTGTACAAATCAGAGCATTCCACTTTTCCTACATCGTCAGCTCTGCCAA
CTACAATACTTCCTACAACAGATATTTCTACTGCACACACTACACGGATA
ACACATCCACCTCCAACTACTAAGGTAAACACTACAGCATCTGAAATATC
AACTTATAGTGCCTTGAACCAAACACGCTTTCCTCCAACATTTCCACAAT
TGTTACATCACTTAAACTTACCATGCTATACCTCACCTTTCTATCACACT
TTACTAATAGATAAGCACAATTTCCACATCTCTGCAACCGACAACATCCC
AGTCAACAATCCAATCAACGCAGCAAACAACAGTAAAGCCTTCCACCAAA
CCATCAACACCAATATCTACCCAACAGCCGACGACTATTCCCACATCATT
GTACACATCAGAGCATTCCTTCTTTCCTACATCGTCAGCTCTGCCAACTA
CTCAACTTCCTACAACAGATATTTCTACTGCACAAACAACACGGATAACA
CATCCACCTCCAACTACTAAGGTAAACACTACAGCATCTGAAATATCAAC
TTATAGTCCTTGAACCAAACACGTTTTCCTCCAACATTTCCACAATTGTT
ACATCACTCAAACTTACCATGCTATACACCACCTTTCTATCACATTTTAC
TAATAGATAAGCACAATTTCCACATCTCTGCAACCGACAACATCCCAGTC
AACAATCCAATCAACGCAGCAAACAACAGTGAAGCCTTCCACCAAACCAT
CAACACCAATATCTACCCAACAGCCGACGACTATTCCCACATCATTGTAC
AAATCAGAGCATTCCACTTTTCCTACATCGTCAGCTCTGCCAACTACAAT
ACTTCCTACAACAGATATTTCTACTGCACACACTACACGGATAACACATC
CACCTCCAACTACTAAGGTAAACACTACAGCATCTGAAATATCAACTTAT
AGTGCCTTGAACCAAACACGTTTTCCTCCAACATTTCCACAATTGTTACA
TCACTTAAACTTACCATGCTATACACCACCTTTCTATCACATTTTACTAA
TAGATAAGCACAATTTCCACATCTCTGCAACCGACAACATCCCAGTCAAC
AATCCAATCAACGCAGCAAACAACAGTGAAGCCTTCCACCAAACCATCAA
CACCAATATCTACCCAACAGCCGACGACTATTCCCACATCATTGTACAAA
TCAGAGCATTCCACTTTTCCTACATCGTCAGCTCTGCCAACTACAATACT
TCCTACAACAGATATTTCTACTGCACACACTACACGGATAACACATCCAC
CTCCAACTACTAAGGTAAACACTACAGCATCTGAAATATCAACTTATAGT
GCCTTGAACCAAACACGTTTTCCTCCAACATTTCCACAATTGTTACATCA
CTTAAACTTACCATGCTATACACCACCTTTCTATCACATTTTACTAATAG
ATAAGCACAATTTCCACATCTCTGCAACCGACATCCCAGTCAACAATGCT
ATCAACCCAGCAAACAACAGAGAAGACTTTAACCAAACCATCAACACCAA
TATCTACCCAACAGCCGACGACTTTTCCCACAACGATGTACACATCAG Coding sequence (CDS) from alignment at Sc0000015:4343787..4348034- >transcript:BL75775_cuf0 ID=transcript:BL75775_cuf0|Name=transcript:BL75775_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1266bp|location=Sequence derived from alignment at Sc0000015:4343787..4348034- (Branchiostoma lanceolatum)
ATGCTATCAACCCAGCAAACAACAGTGAAGACTTTAACCAAACCATCAGC
ACCAATATCTACCCAACAGCCGACGACTATTCCCACAACAATGTACACAT
CAGAGCATTCCAAGTTTCCTACATCATCAGCTTATACAACTATGCAAACA
TCAGCTGTCCCAACTACTCAACTTCCTACAACAGATATTTCTACTGCACA
CACTACACGGATAACACATCCACCTCCAACTACTAAGGTGAACACTACAG
CATCTGAAATATCAACTTATAGTGCCTTGAACCAAACACGTTTTCCTCCA
ACATTTCCACAATTGTTACATCACTTAAACTTACCATGCTATACACCACC
TTTCTATCACATTTTACTAATAGATAAGCACAATTTCCACATCTCTGCAA
CCGACAACATCCCAGTCAACAATGCAATCAACGCAGCAAACAACAGTGAA
GCCTTCCACCAAACCATCAACACCAATATCTACCCAACAGCCGACGACTA
TTCCCACATCATTGTACAAATCAGAGCATTCCACTTTTCCTACATCGTCA
GCTCTGCCAACTACAATACTTCCTACAACAGATATTTCTACTGCACACAC
TACACGGATAACACATCCACCTCCAACTACTAAATGCTATCAACCCAGCA
AACAACAGTGAAGACTTTAACCAAACCATCAGCACCAATATCTACCCAAC
AGCCGACGACTATTCCCACAACAATGTACACATCAGAGCATTCCAAGTTT
CCTACATCATCAGCTTATACAACTATGCAAACATCAGCTGTCCCAACTAC
TCAACTTCCTACAACAGATATTTCTACTGCACACACTACACGGATAACAC
ATCCACCTCCAACTACTAAGGTGAACACTACAGCATCTGAAATATCAACT
TATAGTGCCTTGAACCAAACACGTTTTCCTCCAACATTTCCACAATTGTT
ACATCACTTAAACTTACCATGCTATACACCACCTTTCTATCACATTTTAC
TAATAGATAAGCACAATTTCCACATCTCTGCAACCGACAACATCCCAGTC
AACAATGCAATCAACGCAGCAAACAACAGTGAAGCCTTCCACCAAACCAT
CAACACCAATATCTACCCAACAGCCGACGACTATTCCCACATCATTGTAC
AAATCAGAGCATTCCACTTTTCCTACATCGTCAGCTCTGCCAACTACAAT
ACTTCCTACAACAGATATTTCTACTGCACACACTACACGGATAACACATC
CACCTCCAACTACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000015 | genome | Sc0000015:4343787..4348034 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75775_cuf0 |
| Biotype | protein_coding |
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