|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75787_cuf0 >transcript:BL75787_cuf0-protein ID=transcript:BL75787_cuf0-protein|Name=transcript:BL75787_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=132bp
MGGAGLCGFGTAPPYRGPSVAKLHIYKEKKTIYKDGLTHIYMFRFTHIYT
REDTHTYMFRFTHTQTYTKGNTYTYVQHYSHIYTKEDTHTCSCSALLTHT
HTHTHTHTHTHTLLIHRNMHTCALRLGMSCVD Run BLAST on NCBI mRNA from alignment at Sc0001075:1752..8524+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75787_cuf0 ID=transcript:BL75787_cuf0|Name=transcript:BL75787_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=6773bp|location=Sequence derived from alignment at Sc0001075:1752..8524+ (Branchiostoma lanceolatum)
AGCAAGTGTAGCTGCACACATCCCAACTACACCTGCTACAGACCGGCTGT
AGTTCGCTGTAGCTAATGTAGTACCGTGTACTCAGAGGGCAAGAAGAACC
CAACTACAAGATTTGTAGCTGTAGCAAATGTAGCAAGTGTAGCTACACAA
ATCCCAACTACACCTGCTACAGACCGGCTGTAGCTGGCTGTAGCTAATGT
AGTACAGTGTACTCAGAGGGCAAGAAGAACCCAACTACAAGATTTGTAGC
TGTAGCAAGTGTAGCAAGTGTAGCTGCACACATCCCAACTACACCTGCTA
CAGACCGGCTGCTGTAGCTCGCTGTAGCTAATGTAGTACCATGTACTCAG
AGGGCAAGAAGAACCCAACTACAAGATTTGTAGCTGTAGCAAGTGTAGCA
AGTGTAGCTGCACAAATCCAACTACACCTGCTACAGACCGGCTGTAGCTG
GCTGTAGCTAAAGTAGTACAGTGTACTCAGAGAGCAAGCGGAACCCAACT
ACAAGATTTGTAGCTGTAGCAACTGTAGCAAGTGTAGCTGCACACATCCC
AACTACACCTGCTACAGACCGGCTGTAGTTCGCTGTAGCTAATGTAGTAC
CGTGTACTCAGAGGGCAAGAAGAACCCAACTACAAGATTTGTAGCTGTAG
CAAGTGTAGCAAGTGTAGCTGCACACATCCCAACTACACCTGCTACCGAC
CGGCTGTAGTTCACTGTAGCTAATGTAGTACCGTGTACTCAGAGGGCAAG
AAGAACCCAACTACAAGATTTGTAGCTGTAGCAAGTGTAGCAAGTGTAGC
TGCACACATCCCAACTACACCTGCTACAGACCGGCTGTAGTTCGCTGTAG
CTAATGTAGTACCGTGTACTCAGAGGGCAAGAAGAACCCAACTACAAGAT
TTGTAGCTGTAGCAAGTGTAGCAAGTGTAGCTGCACACATCCCAACTACA
CCTGCTACAGACCGGCTGTAGTTCGCTGTAGCTAATGTAGCACCGTGTAG
TCGGAGGGCAAGAGGAACCCAACTACAAGATTTGTAGCTGTAGCAAGTGT
AGCAAGTGTAGCTACACAAATCCCAACTACACCTGCTACAGACCGGCTGT
AGCTCGCTGTAGCTAATGTAGTACCATGTACTCAGAGGGCAAGAAGAACC
CAACACGGCACTTTGCCACTTGCGTTTTTCGTTTTTTTCTTAATTGAAAA
AGAAATTGCCATTTCAACCGGCACGCTGGCGGTAGTGGACCGACGCTGGA
TCGTCACTAGGACGGTACACCGAGGTTTGTGCACGGCACTGCGGCGGTAG
CCATTCGCACGGTACCTTTATATACCACCAGATTGGAGAAACTATTCTAC
GCGCTGCGCTTGCATGATTTTTTATCTCCATGAAAAATGGAGATATAGTT
TTGAGTGTGTCTGTGTGTGTGTCTTTGTTTGTTTCGATGATATTTGGTAT
GTGAGCGGGTGTTGGGAGGCTGAAATTTAAGGTCGATGTTGGGCCCCGTG
GTATATGACCTTGGTACTGCAGCAGAACTTCCGTTTTTGTATCGTTTGAC
CTGCACGTGCAATTGTTTTGATTTTTGGGTGGCAGATAGCTGGTAATGTA
ACAAAGAATTGGCGTCGGTTTGGGCTCCCAAGCAGTTTGCTTTGATATTG
GCATGGCAAGAAAGTAAAAACACGGGGCGAATTTACACTAAAATCAACTG
ATTTCAATTCATATCATGAAATGTGTACAGGTTCGAAAATCTGCAGGACT
AAGACGGGAACTTTAGAAATTATAGCCCGGGGGTCGTAGAACCAAGGAGG
TTTAAAATTATATTTAAAACCTCCTTGGTAGAACGTAAAACTGGCTCAAA
ACAACCCGGTTCGCTGTTGGAAGCAGTCAGACAATTTTGAGGCTCGATTG
ATATCACTTCGGAGCGGTGTATTGGCTGGAAACTCAGAAATCTAAAAAGG
GAGATCATCTTGAATATAATGCTAGAGAACAATTTGAGTTTTATATTGCA
AGTAAATGTCCAGAGTAGAGAATCACTAAAAAGTCAATATCGGGTGCGTT
TTATTCTGGATTCAAAATAATGACATGTCTTCGCGCGTATTGGGGGCATC
TGCATTTAGCCCTCGAAATCTATGTTGACTCATTTACCGACAGAAACTAC
GAGGTTTGTTCTTTCTTACGCATTAGATTTCGTGTTGGTTTTAAGTCTAC
AACATGTTAAGAACAGAATGGGAAATTACACGAAAATCAGATGACTTCGG
GTCGTATTTTTGACAGGAAAGCGATAAACAATCGGTTCAAAAATCTATAG
GATTAGGAATGAGGCTGTAATTATTGTAAATGACTTGAAAACAGGAATAT
ACAAGGTCATGTTCTTCAGCTATAAGCTTTGGGCCGAGTTGTCCTGCTTC
CCTTTCTTGTGAGGGGTGTTGGCGCCCGTAGTCATGGACCGGACTTTACT
TTCTCTCGCGGAGGGAAAATAAAACTGCTTCGAACTCTCGACGTGGCTTG
GCGGCTGACATGTTGTAGAAGTGGTTTGAGACGATTACTGTGATAATTGA
AAGGAGCGGACCGATTCTCTTGGGCTTTCTAAAACATTTTGCCCGCCGGT
GAGAATCTGCTCCCCCTCACAAGTTTCCAGATGGAGTTATATCCTTGGTT
ATATGCGGCAGCATTTTTAACTATTAAAGAACTGACCTTCAGCTACAGTC
GTCCAACAGGTTTTAAAAGTAGATCCAATAAGGGAAAGATATTGTGGGCT
TTCTAAAATATTCAGTCCGCCTTCAAAATCTTCCAGACTGAGAATCGTCC
ACTTCCGTCGCGTCATTGTCAAGTACATGTAATAGTTAAAGGATGGGCGG
GGCAGGATTATGTGGATTTGGTACAGCCCCGCCCTATCGGGGGCCAAGTG
TTGCAAAATTACATATATATAAAGAAAAAAAAACGATATATAAGGATGGT
TTAACGCACATATATATGTTCAGGTTTACACACATATATACAAGAGAGGA
CACACACACATATATGTTCAGGTTTACTCACACACAGACATATACAAAGG
GGAACACATACACATATGTTCAGCATTACTCACATATATATACAAAGGAG
GACACACATACATGTTCATGTTCAGCTTTACTTACACACACACACACACA
CACACACACACACACACACACACACACATTATTGATACATCGTAACATGC
ACACATGTGCACTCAGGTTAGGTATGTCATGTGTAGATTAATCTCTTAGA
AGCATTACGATTATAAGCTATGGTCTTCATTTTCAAAGGTAGACAGCTCT
TGCAAGTCGGGACTATAAATCCGAGCCTAATCTGCAGTACCGCTCCCGAC
CGCGACATAAAAAGTGTTAAAACGACGGTCAAATTTCCAAGTGAAGTGGA
AGTGTCTGGGTTTTGACCCCAATTTCGCTCCAAATTTTGAAGTAGGGTCA
CTTAAGAATGATATAATGAATCTTCATGACTTTCGGAAGCTTATGAGATG
ACTGACACAGAATGTGAAATATGCAAATCATGTCCTTATGCATCAATACT
GAGTTAATGTTACGATTCTGCTACGTTCTTGAATAGTGGACGTTGCAACA
TGCAACAGATGAAGCCGAAATAGAACAATCAATTTCAAATAACAGTCTCC
ATAATGTAAGATATCTATACTATAATACTACTGTGGTAAATGACGCGATT
TTCACACTGGCAGCACTGAAAAATGAACTAAGGAAAGATATCAGCACCAA
TACATCAAGGCCAATTTTGAACGATTAACAGGAAAATGCTACAATTGCCT
TTTTATGCTGACACCTAATCCTGGCCAACATAAGATAAGTCTAAATTAGC
AACATAATACACTATTATCGTAAAGTTCAAAGTAACAATGCACCCTTGTG
AGACGACTTTTCCTGTCCTTGTGGACACCGTTAGATTGTAGTAAGGAAAA
AGTATTGATATGTACTGGCAATTTCACCGCACAGATGAAAACAGATTACT
CTCTTAAACATCCAACTTTACTTTGTAGCACATATTTATGTGGTTTTTAG
CGTCCCATATATCTGTAATGCATGACACAGATATATCTTTGCGTGAAAAC
ACAGATATATGTAACGATCGCATCACAAATTTTTCGCCCACAAAAATTAC
TATAGACAAAAGTGATACAACAGCACTTGAATCTTGAAACAAAGTACCTG
CTTTTGAATTTAGCTGTAAATTAAAGGAGTTTTTTTAATCTATCAGTGGC
TGAAAATGATATAAACAGAGCAGAACTCGACTAGACTTGTAGCAAAAAAC
TCTTCTTGACCTTAACAGCTAAGTTCACAGCGGGTGCTTTGTTTTGAGAT
TTAAGTGCTGTTCTATAAGTTTTCTCTGAAAACGAAGATACATGCAAGAC
AGATATATGTGGCGATCGTTCGATAAATATCTGTGTATCGTGGAACAGAT
ATATCTGCGTTTTGGAACACAGATATGAGTAGAGTAGAGTAGAGTAGAAT
TTTCGGTCAGGTAGGACTGTTCCAGTTTAGACCGCTCTTCATATATGTGG
CGATCGTTTGATATATATCTGGGTTTTGTGGAACAGATATATCTGCGTTT
TGGAACAGTTTATCCTGCCTTTCATTCCGTGTCCCGCTTAAGCCTGAATT
CAACCCCGTGACGGCTCACCGCCCACTAACCGCCTCGCCTCCCCGCGGGG
AGGGGATAAATCCCCCCCCCGGGCAGCTGGAGTTTGCGTTATACAGACTA
CCCGCTCATCAGCTAGGACACGCGTTTCTCATGCCCAACTTCTGTTTCAC
GGATGCGGTTTTCTTGATGTATGGACTGCATATATCTGGCAGGCGACGGC
TTTTTCTGCGCCTAAACAGGAATCTTATGGTCTTATGAGGGTTTTTCCAG
ATGTCGGGAAAATTTCAGCCGACACATCCGGAGCGTTCACCCGACAACTC
AGCGGGAGTCCCCTACTGCTTCAGCACAGGTCTAAACAGAATGTGTCCCG
ACATCTGGAGAACAGTTTTTCCAGGGAGTATAAACATTTTCCGGTGCGTT
ACAGGCCAGCCTATGACGCATAAGGATAAAGCACCGAGGAAACCATTTCT
TACAGTGATGATCACAGATGTCCTCGTTCAAGGTTCAAGGTTCATCGGTA
AAACTAGGCCCTCAAAGATATCTTTCTGATTCCAACAATAGTTAACAAAT
GTCATTGAAAGCACTACTGAAAGCAGGAGTTTAGCTTTAAACACAATTCA
TCACGATGTATCACCACTACATTCCAACTCCACGGGTGTCCTTCAGTAGT
TCCTGTCGGTGTGTATAAATGCCTCCCGACATCTCTGCCCAGATGTCGTC
TGATTTAGGAAAAAAATCTGCAAAGGAGCATGGCATCTCTCCCGCCTACA
CCTACTCTATTTGTTAGAAATCTTGAATAGATCTAGTTTTCTATTGTTAA
AAATCCGTTTCAAGGAAACACGACACACACCACGCTACCGGCACGGTACG
GGGGTGTCGCCAGCGCAGCCGAACAAATCCCCCGCCGCTCACGTTAACCC
GCACCCGTTGTTTACGTTTGGAAGAGGTAAGCTGAGAAACACAACGCTCG
TTCAAACCTTACTACCGTTGACTGTCACGCCCTTCGAAGCGGTAAACTAC
AGTCCGAAGATTTCTGTGTGTCCTTCAACAACTACAGATAATTGAAGACT
CGTCACTGCATGGCTAGCACAACAAAACAACGAGCGCGCTCATGAGCTTC
TGTACTTATCGCCTCGGCAAAGTTTGGCGACAAGCTGGAAGTTTGCTTAC
GAGGAGGAAAGACCGGACATAAATATTTTTGATTATCGGGAAAACACCAT
GTTCCGTTGAACTGGGTGGTTAAACTGCAGTTTAGGAAATTTTATAACAG
AAATAAAGTTAAATCAATGATTTTGTGAATGTTTATTTCAGCATTAGTTA
TTCCAGATATTTTCAAACTCCAAATTCTTCAACACAACACGGGAGATCGT
TTCTCCTCAGACTGGCGCGCAACTCCTGACAAAATTGATTGATGATCTCT
CTCTGCCGCCGACTTCATTCATGATCAAAGACATCAAAGGCGGGCGGAGG
GCGGTGCGCAGGGAAACTTGAATATATAATGTAGCGAAGTTGTTGCACAA
GGAATTCTCACGCTGAGGGGTACATGAAATAATGCTTACAAAATAGACCT
CTATGAATCGGGCTACATTCAGCAATGGTAGACGGATTCGGGGCATGCCG
CGCAAAACACATGGTCTCATATCACTGGGGACAGGCGTTTTGATCCCGCA
CGTTGTCGCCGCTACGCGATCGAAAGCACGCCGCTGTCTGTCTCGGACCA
ACACGCGTCTCCCGTGATGTGTAGCGTCCACCACCAGGCCTTCCTACATG
TCCTACGTACGGGCGTATGGATCGTAGAATTCGGCAAAAAAGGAATGATT
AGGCCAGTAGAGTCAGTCCCCGGTAAGGTCAATGATTCGCCCGTTTGCGC
TTGTAACGTTAAATGAACTTACCCACCCTCTGGTGGCCAAACTTCACTGA
CAAACTTACATTCTCCCTATTTCTATCATGAGCTTGCGTAGTTAGTCTGG
TACTATTATGTGCCGGGAATGTTTATCTATCGCACGCCTTGGAAGGAAGT
TCAACCATGATAAATGGTCGGCCGTTGCGAAAATTTGGAATCCCATGCTG
TTGATTTTCGTGATTGAATCTGTAAGAAAATATATTTTCATGTCGTTCAT
GTTTTTGGGACGGACGCCGGGAC Coding sequence (CDS) from alignment at Sc0001075:1752..8524+ >transcript:BL75787_cuf0 ID=transcript:BL75787_cuf0|Name=transcript:BL75787_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=399bp|location=Sequence derived from alignment at Sc0001075:1752..8524+ (Branchiostoma lanceolatum)
ATGGGCGGGGCAGGATTATGTGGATTTGGTACAGCCCCGCCCTATCGGGG
GCCAAGTGTTGCAAAATTACATATATATAAAGAAAAAAAAACGATATATA
AGGATGGTTTAACGCACATATATATGTTCAGGTTTACACACATATATACA
AGAGAGGACACACACACATATATGTTCAGGTTTACTCACACACAGACATA
TACAAAGGGGAACACATACACATATGTTCAGCATTACTCACATATATATA
CAAAGGAGGACACACATACATGTTCATGTTCAGCTTTACTTACACACACA
CACACACACACACACACACACACACACACACACACATTATTGATACATCG
TAACATGCACACATGTGCACTCAGGTTAGGTATGTCATGTGTAGATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001075 | genome | Sc0001075:1752..8524 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75787_cuf0 |
| Biotype | protein_coding |
|
