|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75886_cuf0 >transcript:BL75886_cuf0-protein ID=transcript:BL75886_cuf0-protein|Name=transcript:BL75886_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=111bp
LITSKMAVVWKFLFVYVVVFVQFSTSLRPGIKSRNLHLPKRIWQDAQDKG
FYQIDSGSFPVEDVDGVDSTLARVKRDHTSPLPQVSREHPVKSASKIHPT
SIASANLEDSM Run BLAST on NCBI mRNA from alignment at xfSc0000930:8..3434- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75886_cuf0 ID=transcript:BL75886_cuf0|Name=transcript:BL75886_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3427bp|location=Sequence derived from alignment at xfSc0000930:8..3434- (Branchiostoma lanceolatum)
TCTCATAACATCCAAGATGGCGGTCGTGTGGAAGTTTCTGTTTGTGTATG
TTGTCGTTTTTGTACAGTTTTCAACTAGTTTGAGGCCAGGAATCAAGTCC
AGAAACTTGCACTTGCCGAAAAGGATATGGCAGGATGCTCAGGACAAGGG
TTTCTACCAGATAGACAGCGGTTCCTTTCCGGTAGAAGATGTTGACGGTG
TGGACTCGACTCTTGCCCGCGTCAAGAGAGATCACACTTCTCCCTTGCCA
CAAGTCAGCAGGGTACGTAAATATCATCTTTCCAGATCCTACTACATTAT
TAACGCCGGCAAAACAGTCTACGTGAATATCATACTTTCCTAAAGCTTGT
TCCCCATCCATTGTGTAATAGTTCTCGTTCATTGTTGCGTTTTGAACGCT
TTTGGAATCCCATGCTCCCACCAGGAAGTTAAAATTTGTTTCGTCACACG
TATAAACTAAGATCAGGTGATCTTTTGTAATATCATGTTACGTCTGTCCC
CAACAAGTCCAAATATATGCATTGTGTGGAATTATCAGACGGACAAAGAT
AGTTTGATTTTGTTTTTTCTGGATGGCCAGTAGAAATTTAGAACCTACAC
AGAATGATAGCCACCAATATTTAGATAAAATTCACCTGTCAAAAATAAAT
TATGTCTGAGACACTTAATTGTCGTGGGTTAGACTTACGTATGATATTTA
CTCATGTCTTCTCAGAGGTTGTTTAACTGTTTGATTTACTACTTCTAAAA
GAGCCCTGTCAGTGTTTTGTAAATGGTACGTGTGCTCGTAAGAGACAGGT
ACGGGCTGTGATCTGGAGTAAAACTAAAAGGCCACGGAAAGGGCAAAATT
ACGGCTTGTTCACATCCCCGTCGCCAAACTGCGACACCCGGGCGAGCTTC
CCGTTTTCTCGGAATAAGGGATGAGGGAGTGTTTGGATTCACATGGCGTA
GTACTCAGCATCACATTTTTAGCAAAAAAAGAGAATTTCGCTACTTTGGT
AATATTAGCATCTGAATCTGATCTTATGTAACATCTTGCAGAAATATTAT
TAAGTCTTGACTTGACACTGTATGCAATGCGGGGTGGTGTTTTGTACGCA
TGAAAATGTTGCATGTGAAAAACTTTTGTGTGAAAAATCTATGCATTGAA
ATACGCAAAGTAGGTAACTCCCATGGGATTTTAAAACTTTTTACTGTTTG
GAACTTAAAAGTTAAAAATTGGAATCAAGTATCATATTGTTGCATTCTGG
GGTGCAAAATCCCAGAATGTAAAACAATTTTTCAGTACTGTACATTTTCT
GACATATTTCAGGGACTTTCCATGTGCATTTTTTGTACATGCAGATGACT
CATTTCCATGAAATAGTTGTATTGTATTTAAGCTTTTATTTAATGAAGCT
ATTGTTTGGTAGTGTAGGTGCGAAAGCTGTTTAATTGTCATGACTCATAG
GCACCTGACAGCCTTTACTGTTGACACTAGGATGTGTACTGAGACAGTAA
GCCTGGACTGGAACATCCTGTCAATAGTGAAAAAAGTCTTATTGACAAGA
AACACAGGAATCCTAGGCATGGCATACTGTGTTTTTTCACAGGAGCATCC
TGTCAAAAGTGCCTCAAAGATTCATCCTACGTCAATTGCCTCAGCCAATC
TTGAAGATAGCATGTAAATTGCAAATCTTCAAGTTCAAGATTCTTACATG
TACATGGGTACCCGGTACTTTTGTTAGGTCTTACATAGTGACAAAGGATT
TAATCATTAAACACATGGATGGCCAATATTCCCAACACAGCACAAAACAA
ACACTTTTGTTTTTGTCATATTGCATGATAATGGAAAATATAATACCCTT
TAGTTTTACTTGATCTGTACTACTATAGATTTTAATACATTCAGGGGGCA
TGTATATTTGATGGATCACATTAAGTTCCTTATGTGATAATGAGATATTC
TTTTTCCCTGATAGCTAATTACGATTACAAGATCCTTGTTATGATCTTTT
TTGTTACATTTTATTTTACAATACTGACAGCCTACTTTATGTCAGTGGTC
ACTGGTTAGATGATTTTTGTAATCTTTGAGTTTGAACACATTCCATCAAA
AATTTGTTATGGTACCCCTTTGCACTAAAAAAACCCAACACTTCTCTATG
CCTGGTTCTTCTTGGACTGCTGCTTGTGTATGTCATCGTAAGTGTTCTCT
AACATTTGTTGACTAAGACCCAAGAGACTGTTTGCATTCAAACTGACACA
AAGCCAGGAAGCTTGACAACAGTATCTTACTCATCAATATTTAATTAACC
AATACGCGATGGGTGCAATCAGTCTGACCAAGTATTTCTAGATTGCCACA
ATGTTGATCACTCGACACTTTTCATGAATTTCGTATTGTATGTTGGCTTA
GATTTAGATTAGTCTACTTTTATCGTAATTGCACATGTCTTCTCTATACT
GCATTGCATCGTTTTCTTTGTTGTATATTATTCAAAATGTACTAGAGTTT
TTGAATCGCACAACTTGATATACCCTAAATTATGTATATAATGATATTGG
TTTTAAATTAATGTGAGCTGACTTGTAAATACATTATATACCCAATGCAG
ACTTTCCAGTCTACCATGTTGTAATGATTGTATTATCAATAAAGTTTCAT
AGTTTCAAAGTTTTTATAGACTGCATGGAACTACAGGGCTTGAAATTCAT
TTGTATTTTAGGAATAGGGATACAGGTGCACCTAACCTAAAGATTTAGGT
GCAGGAAAAAAGTGAGTGCACAATATGAAATAAATCAACCCATACATGTA
TTTGATAGCTAAGTTCAAAATTCTAAAGAAGTAAAACAGCAAAGATTTTC
TCATTATATTCTGATACTTAAGTTAATCAATTGTCAAGAATATGCGGTAT
GCTGCGTAGTGTACAGTAGTAACAGTAGTATTTTGTACATTAGACATACA
TGTATGTTAACCTACAAAAATATCTAGTTGCTCAGTGCACCCATGGTCGA
ATTCGATGCACAGATGCAATTTCGGGCGTACAAAAATGCATATTTATGTA
TGTGTATTTTGGGCCCTGAACTACCTGTATGAAATATATGAATGTTGATT
GAAAGTAAATGTTGTTTGGGTTTTGGTTCCGTATAAAGCTTTTTGTGACA
AGGCTACATGACATCATTGCCTTGTGACTTGTACTGGTCCTACCTGTTCC
TCCTGTACCGTAAACCTTCGAACATTTCTGGTGGTTTCATTTTCATGGAG
ACCTCTCTGTAGCAAATTCATGACACCACAAATATGCGTTCCCAATGTAT
TACTTCAGAAGTTCTGTACTACAGACAGTGACTTGTTTCACCCACAAACT
TGAAACATGGCGAAAACCCTCTTTTGTCCTATTGTTTTCTACCATAAAGT
TAAGTCCATGCGAAAATAAAAGAATCT Coding sequence (CDS) from alignment at xfSc0000930:8..3434- >transcript:BL75886_cuf0 ID=transcript:BL75886_cuf0|Name=transcript:BL75886_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=672bp|location=Sequence derived from alignment at xfSc0000930:8..3434- (Branchiostoma lanceolatum)
CTCATAACATCCAAGATGGCGGTCGTGTGGAAGTTTCTGTTTGTGTATGT
TGTCGTTTTTGTACAGTTTTCAACTAGTTTGAGGCCAGGAATCAAGTCCA
GAAACTTGCACTTGCCGAAAAGGATATGGCAGGATGCTCAGGACAAGGGT
TTCTACCAGATAGACAGCGGTTCCTTTCCGGTAGAAGATGTTGACGGTGT
GGACTCGACTCTTGCCCGCGTCAAGAGAGATCACACTTCTCCCTTGCCAC
AAGTCAGCAGGGAGCATCCTGTCAAAAGTGCCTCAAAGATTCATCCTACG
TCAATTGCCTCAGCCAATCTTGAAGATAGCATGTAACTCATAACATCCAA
GATGGCGGTCGTGTGGAAGTTTCTGTTTGTGTATGTTGTCGTTTTTGTAC
AGTTTTCAACTAGTTTGAGGCCAGGAATCAAGTCCAGAAACTTGCACTTG
CCGAAAAGGATATGGCAGGATGCTCAGGACAAGGGTTTCTACCAGATAGA
CAGCGGTTCCTTTCCGGTAGAAGATGTTGACGGTGTGGACTCGACTCTTG
CCCGCGTCAAGAGAGATCACACTTCTCCCTTGCCACAAGTCAGCAGGGAG
CATCCTGTCAAAAGTGCCTCAAAGATTCATCCTACGTCAATTGCCTCAGC
CAATCTTGAAGATAGCATGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000930 | genome | xfSc0000930:8..3434 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75886_cuf0 |
| Biotype | protein_coding |
|
