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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75928_cuf0 >transcript:BL75928_cuf0-protein ID=transcript:BL75928_cuf0-protein|Name=transcript:BL75928_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=217bp
MFVTFANLKQISTVLKSYKLAREAPGSQGSCQAPDCKNNIFLPVGYGLCN
RWVCLETNVRRITSWQVCAVRSLFLYSKQFNQLGNLKKHLRTHTGKKPYK
CEECSRQFSELGNLKIHMRTHTGEKPYKCEECSRQFSTSSHLKHMRTHTG
QRPYMCEECGKQFNQLGNLKSHMRTHTGEKTYRCEECSMQFSHLNSLKTH
MQTHTGHNCLSCKKDIA Run BLAST on NCBI mRNA from alignment at Sc0000003:8194349..8196060+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75928_cuf0 ID=transcript:BL75928_cuf0|Name=transcript:BL75928_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1712bp|location=Sequence derived from alignment at Sc0000003:8194349..8196060+ (Branchiostoma lanceolatum)
CAGAAGGGCCCAAGTTACAAATGACGGAAGAGCCCTGTGACTATGGTAGA
CTTATGTAAAGCAAGAGAGGACTTGAATTTGGGGTATATTTAGCAAAGTA
TAGTAGAATTTTCAATTTTAAGTTTAGCCTCCCTTTAACATGCATGGTGG
GTTTCTTCGCTTAGAACGTCAAATGCTGCCATTCCGTGTCTCCCAGTCCC
CTCCATTTTTTAATGTTTGTCACGTTTGCTAATCTCAAGCAGATCTCCAC
GGTGCTAAAGTCGTACAAGCTAGCCAGAGAAGCTCCAGGCAGCCAGGGAA
GTTGTCAGGCACCAGATTGCAAAAATAACATCTTTCTGCCAGTTGGATAC
GGTCTTTGCAACCGTTGGGTCTGCTTGGAGACCAACGTTCGCAGGATAAC
CAGTTGGCAGGTTTGCGCTGTGCGTTCCCTTTTCCTTTACAGCAAGCAAT
TCAATCAGCTGGGTAATCTGAAGAAACATCTGCGGACTCATACTGGGAAG
AAACCCTACAAGTGTGAGGAGTGCAGCAGGCAGTTCAGTGAGCTGGGAAA
TCTAAAGATACACATGCGAACTCACACTGGTGAGAAACCATACAAGTGTG
AAGAATGCAGCCGACAGTTTAGTACATCTAGTCATCTGAAACACATGAGG
ACTCACACAGGGCAGAGACCCTACATGTGTGAGGAGTGCGGCAAGCAATT
CAATCAGCTGGGAAATCTGAAGTCTCATATGCGGACTCACACGGGGGAGA
AAACCTACAGGTGTGAGGAATGCAGCATGCAGTTCAGTCATCTTAATAGC
CTGAAGACACACATGCAGACTCATACTGGGCACAATTGCTTATCATGTAA
AAAAGATATAGCCTAAGTACCAACCTCCGTAGTGACCGCTGGCTAAAAAC
ACAGTTAGCAAGTGATTTTTTTGGGACCAGCGGTCACGATGGAGGCTGGT
ACTCAGGCTAAAAAAGATAAAAAAACTGTTATCAACTGAAGTGTGGAGTA
AGGAGATACTGAGCATTATTGAGGGATAAACAAGCAATATTACAGACAGG
TTAGAATGACCTACATGTAGTAGTGATATGGCTCTTTTTTATGTAGTGGA
ACTTACAGTTAAGTTAGCTGGGAGGCCTATGTAAGGTGTAAACGGGCACT
GAAACCTCTGATTATGATTTCTTAGTTTTTGTTTTTTAAGAATTCTTGAT
ATCTAGAATGTGATAGGTAACTTTTCCATTATTTGGTAAGAAATGGTGAA
AGTGACATATCTTCTTTCTACAACAACCTAAAAGTATATACTTTTTTTTA
CTTTACCGGTATCTCTTTTTCTATTCCATAGACTTTTTTCATTAGGGTTA
ACTATTGATGTTCCAATGTAAACATTTTTGTTCAGTCTTAAGTTAAGTCA
GCTGGAGTGGAGTGATATGATAACAATAGAGGTAGGCGTTGGGCATAATT
TGACTTTATCTCTTGTTCTTTTCAATAGGCTTTTTGTATAGGGTTAACCA
TTCGTATTCCAAAGATTTCTGTTCAGTTTGAAGTTAGTACTGTACTGTAG
CAAAGTCAGATGTTTGGCATGATAGTTTTATCAAATATGTTTCGAATGTT
AAATCAACATGGTAACATATTCTGTATTATAGTTTCAACCAGTAATTGTG
TAATATTGAATATGTGAGTTATGAAGTTCTCTAGTTTGTTTACAGTTCAG
GTAGGAAGAGAC Coding sequence (CDS) from alignment at Sc0000003:8194349..8196060+ >transcript:BL75928_cuf0 ID=transcript:BL75928_cuf0|Name=transcript:BL75928_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=654bp|location=Sequence derived from alignment at Sc0000003:8194349..8196060+ (Branchiostoma lanceolatum)
ATGTTTGTCACGTTTGCTAATCTCAAGCAGATCTCCACGGTGCTAAAGTC
GTACAAGCTAGCCAGAGAAGCTCCAGGCAGCCAGGGAAGTTGTCAGGCAC
CAGATTGCAAAAATAACATCTTTCTGCCAGTTGGATACGGTCTTTGCAAC
CGTTGGGTCTGCTTGGAGACCAACGTTCGCAGGATAACCAGTTGGCAGGT
TTGCGCTGTGCGTTCCCTTTTCCTTTACAGCAAGCAATTCAATCAGCTGG
GTAATCTGAAGAAACATCTGCGGACTCATACTGGGAAGAAACCCTACAAG
TGTGAGGAGTGCAGCAGGCAGTTCAGTGAGCTGGGAAATCTAAAGATACA
CATGCGAACTCACACTGGTGAGAAACCATACAAGTGTGAAGAATGCAGCC
GACAGTTTAGTACATCTAGTCATCTGAAACACATGAGGACTCACACAGGG
CAGAGACCCTACATGTGTGAGGAGTGCGGCAAGCAATTCAATCAGCTGGG
AAATCTGAAGTCTCATATGCGGACTCACACGGGGGAGAAAACCTACAGGT
GTGAGGAATGCAGCATGCAGTTCAGTCATCTTAATAGCCTGAAGACACAC
ATGCAGACTCATACTGGGCACAATTGCTTATCATGTAAAAAAGATATAGC
CTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:8194349..8196060 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75928_cuf0 |
| Biotype | protein_coding |
|
