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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75981_cuf0 >transcript:BL75981_cuf0-protein ID=transcript:BL75981_cuf0-protein|Name=transcript:BL75981_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=234bp
MKDKLDVTNCADVLMYADMLGDCGLVEASGRYIASRFHQVALQPSFLQLP
LPLLQSLLNRDDLLTNSEDKVVQAALRWIDFEQEERLQHLPKLCESFRHS
FISSNQLVELESKCPSADCELVYSDSTTQRLGQTGTEMQIFLRDLLSDFD
SPESQRSAPCYDPSTGRLFSINMPHNLDRFSVTVTPHDDLYLAGGVVTSR
ESTSGSTRQKAFYQYNHLLNTWEPRCEMIAQRVR Run BLAST on NCBI mRNA from alignment at Sc0000016:3724470..3726625- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75981_cuf0 ID=transcript:BL75981_cuf0|Name=transcript:BL75981_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2156bp|location=Sequence derived from alignment at Sc0000016:3724470..3726625- (Branchiostoma lanceolatum)
GAGCGAAAATTCTTTATGGGCACCTACATTTTTAGGTTTGGTGCATCTGA
TAGTAAATGCACCTATTCCCAAAAATAACTGTCGAGCGCCGCAAACTGAC
TGGTAAAGAATGGTCTGTGTAACCCTGTTTGTTGTTTCTAGGTGGAGTTT
GTATGCCATAAGGCAGCAGACTACATGAAAGACAAGCTGGACGTGACCAA
CTGTGCAGATGTGTTGATGTATGCTGACATGCTGGGGGACTGTGGCCTGG
TAGAGGCCAGTGGGAGGTACATCGCATCCAGGTTAGTCCGGTAGTTTGTT
TCCAAACGATTATCTCACTAGTACTGGACTGCACCAAATTGCACTATGAA
ATTGTGCACCAGCTTTGTGAATTTGTGTCAATTTTCTGTACCGTTTTGTT
CACACTGATGTGCACCGCATGGGTAAAGTATATGATTCTGCACGAACAAC
TATGACAGGGGCGCATGGGTAAAGTATGTGACCTCTACAAACAAAGTGGC
AGCACTGGAGATGTCAGGGAACAGGTTTTGTTCGTGTTAAGAATTTTCGC
GTACGAGTGAAAGGCGTGGAAAATTTGAAATGGAGAATTTATTAAAAGTT
TAAAATATCAAAGTAATTTTATCATCAAAATTTTTCTCCCTTGGGAATAG
ACTAGAGTCCCTTGGGAATCAACTTGTTTTGATTTTTTTTCTTCATTTCA
TTTTTGCGTGTGAAACCTTAGATTTGTAAACCTTCAATTCTCTTCGGATC
AACTAATTTGCATATTTTAACGCGCAAATGATCAAAATAACAGGCAAACT
TTTCCCTTGCATGGGTGTGGGCAGGGTGTGGTGTGGTTTGGTGTGTGCTA
TTCCCAAGGGACTCAAGTCTATTCCCAAGGGAGAAAAATTTTGATGATAT
AATAACTTTCATATTTTGAACCTATAAATAAATTCTCCATTTCAAATTTT
CCACGCGAAAATTTTCCACGCGAACGCGAAAATTCTTAACGCGAACAAAA
CCCCAACCCAGATGTCACAATCTCAAGCTCCAAATCTCAGTGTGGCCACT
GGATCAAAACCCGCTGTACCATAATTAACATTCAGAAAAACAAGATTTGC
AGTGATTGTGCCATTTTGCACCATTTTGCAGATTGCGAATTTAAAAAGAT
TTTCAAGGTTTTTGCAATTTCAGGTGACATTAATTCGTGCCGGTTTGTGC
CACGTTGCAAATGCCTTTCACAATTTGGTGCTGTCGAGTGAGATACCTGC
TTAAAGCCACAGCTATTTAAATTTCTTGATTCTCCAGTTTTATAGAATAT
GCCTAACTGTGAAAAGATAATAAAAACAAAGTCTGAGGACCATTCAGTTG
CTCCATTTAGCTTCATAGAGTGAATACAGTCATGATGTTTTGTGTACTGC
CCTCTTCTTTAATGATGTCTGTTTTTTGATCTTAAAATGTCTGAGAACTA
AGAAAATAGATTGGTCTGGTCTAAACAGCATTAACCTGAAAAAGTAATAG
TATAGACTGTGACAGAGACAGAGAGAATGATATGAGCCCATTGCTCGTGT
AATATCCCCAGGTTCCACCAGGTGGCGCTGCAACCCTCCTTCCTCCAGTT
GCCACTTCCACTGCTCCAGTCCTTACTCAACAGAGATGATCTTTTGACCA
ACTCAGAAGACAAAGTTGTCCAAGCTGCTCTGAGATGGATCGACTTCGAG
CAAGAGGAACGCCTGCAGCACCTTCCAAAACTCTGCGAATCCTTTCGTCA
TTCCTTCATCAGCTCAAACCAACTTGTGGAACTGGAGAGTAAGTGTCCGT
CAGCAGACTGCGAGTTGGTTTACAGCGACAGCACAACCCAGCGGCTGGGA
CAGACAGGAACTGAAATGCAGATTTTCCTAAGAGACCTTCTCTCGGACTT
TGATTCCCCGGAATCCCAGCGGTCTGCCCCTTGCTATGACCCATCCACAG
GTCGACTGTTCTCTATCAACATGCCTCACAACCTGGACAGGTTCTCTGTG
ACGGTCACTCCTCATGATGATCTGTACCTGGCAGGGGGTGTTGTCACCAG
TAGAGAGAGTACTAGTGGTAGTACCAGGCAGAAAGCATTTTACCAGTACA
ACCACCTGCTCAACACCTGGGAACCGAGGTGTGAGATGATCGCACAGAGG
GTCAGG Coding sequence (CDS) from alignment at Sc0000016:3724470..3726625- >transcript:BL75981_cuf0 ID=transcript:BL75981_cuf0|Name=transcript:BL75981_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1404bp|location=Sequence derived from alignment at Sc0000016:3724470..3726625- (Branchiostoma lanceolatum)
ATGAAAGACAAGCTGGACGTGACCAACTGTGCAGATGTGTTGATGTATGC
TGACATGCTGGGGGACTGTGGCCTGGTAGAGGCCAGTGGGAGGTACATCG
CATCCAGGTTCCACCAGGTGGCGCTGCAACCCTCCTTCCTCCAGTTGCCA
CTTCCACTGCTCCAGTCCTTACTCAACAGAGATGATCTTTTGACCAACTC
AGAAGACAAAGTTGTCCAAGCTGCTCTGAGATGGATCGACTTCGAGCAAG
AGGAACGCCTGCAGCACCTTCCAAAACTCTGCGAATCCTTTCGTCATTCC
TTCATCAGCTCAAACCAACTTGTGGAACTGGAGAGTAAGTGTCCGTCAGC
AGACTGCGAGTTGGTTTACAGCGACAGCACAACCCAGCGGCTGGGACAGA
CAGGAACTGAAATGCAGATTTTCCTAAGAGACCTTCTCTCGGACTTTGAT
TCCCCGGAATCCCAGCGGTCTGCCCCTTGCTATGACCCATCCACAGGTCG
ACTGTTCTCTATCAACATGCCTCACAACCTGGACAGGTTCTCTGTGACGG
TCACTCCTCATGATGATCTGTACCTGGCAGGGGGTGTTGTCACCAGTAGA
GAGAGTACTAGTGGTAGTACCAGGCAGAAAGCATTTTACCAGTACAACCA
CCTGCTCAACACCTGGGAACCGAGGTGTGAGATGATCGCACAGAGGGTCA
GGATGAAAGACAAGCTGGACGTGACCAACTGTGCAGATGTGTTGATGTAT
GCTGACATGCTGGGGGACTGTGGCCTGGTAGAGGCCAGTGGGAGGTACAT
CGCATCCAGGTTCCACCAGGTGGCGCTGCAACCCTCCTTCCTCCAGTTGC
CACTTCCACTGCTCCAGTCCTTACTCAACAGAGATGATCTTTTGACCAAC
TCAGAAGACAAAGTTGTCCAAGCTGCTCTGAGATGGATCGACTTCGAGCA
AGAGGAACGCCTGCAGCACCTTCCAAAACTCTGCGAATCCTTTCGTCATT
CCTTCATCAGCTCAAACCAACTTGTGGAACTGGAGAGTAAGTGTCCGTCA
GCAGACTGCGAGTTGGTTTACAGCGACAGCACAACCCAGCGGCTGGGACA
GACAGGAACTGAAATGCAGATTTTCCTAAGAGACCTTCTCTCGGACTTTG
ATTCCCCGGAATCCCAGCGGTCTGCCCCTTGCTATGACCCATCCACAGGT
CGACTGTTCTCTATCAACATGCCTCACAACCTGGACAGGTTCTCTGTGAC
GGTCACTCCTCATGATGATCTGTACCTGGCAGGGGGTGTTGTCACCAGTA
GAGAGAGTACTAGTGGTAGTACCAGGCAGAAAGCATTTTACCAGTACAAC
CACCTGCTCAACACCTGGGAACCGAGGTGTGAGATGATCGCACAGAGGGT
CAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000016 | genome | Sc0000016:3724470..3726625 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75981_cuf0 |
| Biotype | protein_coding |
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