transcript:BL75983_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL75983_cuf0
Unique Nametranscript:BL75983_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL75983_cuf0

>transcript:BL75983_cuf0-protein ID=transcript:BL75983_cuf0-protein|Name=transcript:BL75983_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=119bp
GDIYILTVVQDRPLNLWDAAQVRIDAYQYQSKTGSWRYLSVKDSNKFVPP
LLQWLGSGSKTDCLTARMIPKCLGDPDEFQDDEPDESDVSLSESSRTSDY
DDSDDDLSDQDDSNEDNDD
Run BLAST on NCBI

mRNA from alignment at Sc0000016:3722615..3723353-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL75983_cuf0 ID=transcript:BL75983_cuf0|Name=transcript:BL75983_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=739bp|location=Sequence derived from alignment at Sc0000016:3722615..3723353- (Branchiostoma lanceolatum)
AGGGGATATATATATCCTCACTGTTGTACAAGACCGCCCGCTGAACCTAT
GGGACGCAGCTCAAGTAAGGATAGACGCCTACCAGTACCAATCAAAGACA
GGCTCTTGGCGATATCTTTCAGTGAAAGACAGCAACAAGTTTGTTCCCCC
CTTGTTGCAGTGGTTGGGTTCCGGGAGCAAGACAGACTGCCTGACAGCAA
GGATGATCCCAAAGTGCCTTGGGGATCCGGATGAATTCCAGGACGACGAG
CCAGATGAGAGCGATGTCAGTTTGTCAGAGTCATCCCGAACATCAGATTA
TGATGACAGTGACGATGACCTTTCGGACCAAGATGACAGTAACGAGGACA
ACGATGACTAACATAGTGATAGTGACAACAGTGATGTCTGAGACACTAGA
TCTAGTCTGGGTACCATCCTTCGTAGTAACTGCTAGCAAGTGAAATGATT
GAGCCAGCGGTTGTTATGGAGGATGGTACCCAGGCTACACTAGATCATGA
TGAAACAGGTTTTTTTGTAGGAAGACATTGCAAAGGGGGCATATTGTAAG
GGAGCAGATGGACCAAGCAGGGGGGGGGGGGGGTTATCCCTTTCACGGTG
TGGTCAGATTTAGAATTTTAATTCAAAATGGAGCGCTCTAAGGCTTCCAG
AGGAGCAAAATTACTGTCCGAGAGGTCACAGTTGAAGACTGGCCACATTT
CACCTAAGTAGACTCCCTGGTCAATCTGAATTTTGTCAT

Coding sequence (CDS) from alignment at Sc0000016:3722615..3723353-

>transcript:BL75983_cuf0 ID=transcript:BL75983_cuf0|Name=transcript:BL75983_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=360bp|location=Sequence derived from alignment at Sc0000016:3722615..3723353- (Branchiostoma lanceolatum)
GGGGATATATATATCCTCACTGTTGTACAAGACCGCCCGCTGAACCTATG
GGACGCAGCTCAAGTAAGGATAGACGCCTACCAGTACCAATCAAAGACAG
GCTCTTGGCGATATCTTTCAGTGAAAGACAGCAACAAGTTTGTTCCCCCC
TTGTTGCAGTGGTTGGGTTCCGGGAGCAAGACAGACTGCCTGACAGCAAG
GATGATCCCAAAGTGCCTTGGGGATCCGGATGAATTCCAGGACGACGAGC
CAGATGAGAGCGATGTCAGTTTGTCAGAGTCATCCCGAACATCAGATTAT
GATGACAGTGACGATGACCTTTCGGACCAAGATGACAGTAACGAGGACAA
CGATGACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL75983gene:BL75983Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL75983_cuf0-E1BL75983_cuf0-E1-1564476830-131442Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL75983_cuf0transcript:BL75983_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000016genomeSc0000016:3722615..3723353 -
Properties
Property NameValue
Transcript idBL75983_cuf0
Biotypeprotein_coding