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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76080_cuf0 >transcript:BL76080_cuf0-protein ID=transcript:BL76080_cuf0-protein|Name=transcript:BL76080_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=174bp
CFLADNLKYAGKSVCHSPSGLSRLPLSDLSSQQMGCGPHQQTTKAAISTA
KTNSQLQSNDTSLIKRFGDTTKQNPKRNELRAQESYTTDISTMMNPTPDT
TKPSANSMGTKKRQNDELPVPYILTIGTGTFLAMTFIFIIVGIKMKNKPR
EEDNTGAVNHGHAAVNHIAGAVNH Run BLAST on NCBI mRNA from alignment at Sc0000060:523548..524594- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76080_cuf0 ID=transcript:BL76080_cuf0|Name=transcript:BL76080_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1047bp|location=Sequence derived from alignment at Sc0000060:523548..524594- (Branchiostoma lanceolatum)
CCTGCTTTCTGGCCGACAACCTGAAATATGCAGGCAAATCTGTCTGCCAC
AGTCCGAGTGGACTGAGTCGGCTGCCTTTATCCGACTTGAGCAGTCAGCA
AATGGGTTGTGGACCTCACCAGCAGACTACAAAAGCTGCCATATCTACGG
CGAAGACTAATAGCCAACTGCAAAGCAATGACACTTCTCTCATCAAACGA
TTCGGAGATACAACCAAGCAAAACCCAAAACGAAATGAATTAAGAGCACA
GGAATCCTACACGACCGATATCTCGACAATGATGAACCCTACACCGGACA
CTACAAAGCCGTCTGCTAACAGCATGGGTACGAAGAAAAGGCAGAATGAC
GAACTTCCGGTTCCCTACATCCTCACAATTGGGACGGGAACCTTTCTGGC
TATGACCTTCATCTTCATCATCGTCGGAATTAAGATGAAGAACAAACCAA
GAGAAGAAGACAATACGGGTTCGTCTGTTTGTTTGTTTCTTTGGATTCCA
GTAGTAAACTTTCCATCCCCTTATTATATGATACATACATACACAAATCA
AATGAATATTACAATTAAACACCTTTAGTGACAACACAACTCAGGAATAC
ACGTGATTCTATACATTGTACTTAGTGAACCTTGTCTGAAACTAAAATAG
TTTAAAACTAACTAATTCAAAGTGACATATTACCATTATCAACCTAAAAA
TATCATAAACATGTCACTGACAAGCTGAATGTTAAAGTTTACAACACTGC
GAATTTACTATCATACATCCGTTTGAGAGTTTTCTGTTTGTGTGTGTAAT
TTTGCCAATCGCAAATCACCATTTCAGTCCCTCACATCGGCTTTGGTGGA
TATTTGGAAACTCAGTTTCCTCTTCTTGCCACGACACCTTTGTTATCCAC
CTATCAGTAATATCTTAGTCTTAACTGAGTTGGACTGCGAAAATATAGCT
AGACCTCCAGTACATCTTGTCATGCATTATACATTTGCAGGGGCTGTCAA
TCACGGACACGCAGCTGTCAATCATATCGCAGGAGCTGTCAATCATG Coding sequence (CDS) from alignment at Sc0000060:523548..524594- >transcript:BL76080_cuf0 ID=transcript:BL76080_cuf0|Name=transcript:BL76080_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1044bp|location=Sequence derived from alignment at Sc0000060:523548..524594- (Branchiostoma lanceolatum)
TGCTTTCTGGCCGACAACCTGAAATATGCAGGCAAATCTGTCTGCCACAG
TCCGAGTGGACTGAGTCGGCTGCCTTTATCCGACTTGAGCAGTCAGCAAA
TGGGTTGTGGACCTCACCAGCAGACTACAAAAGCTGCCATATCTACGGCG
AAGACTAATAGCCAACTGCAAAGCAATGACACTTCTCTCATCAAACGATT
CGGAGATACAACCAAGCAAAACCCAAAACGAAATGAATTAAGAGCACAGG
AATCCTACACGACCGATATCTCGACAATGATGAACCCTACACCGGACACT
ACAAAGCCGTCTGCTAACAGCATGGGTACGAAGAAAAGGCAGAATGACGA
ACTTCCGGTTCCCTACATCCTCACAATTGGGACGGGAACCTTTCTGGCTA
TGACCTTCATCTTCATCATCGTCGGAATTAAGATGAAGAACAAACCAAGA
GAAGAAGACAATACGGGGGCTGTCAATCACGGACACGCAGCTGTCAATCA
TATCGCAGGAGCTGTCAATCATTGCTTTCTGGCCGACAACCTGAAATATG
CAGGCAAATCTGTCTGCCACAGTCCGAGTGGACTGAGTCGGCTGCCTTTA
TCCGACTTGAGCAGTCAGCAAATGGGTTGTGGACCTCACCAGCAGACTAC
AAAAGCTGCCATATCTACGGCGAAGACTAATAGCCAACTGCAAAGCAATG
ACACTTCTCTCATCAAACGATTCGGAGATACAACCAAGCAAAACCCAAAA
CGAAATGAATTAAGAGCACAGGAATCCTACACGACCGATATCTCGACAAT
GATGAACCCTACACCGGACACTACAAAGCCGTCTGCTAACAGCATGGGTA
CGAAGAAAAGGCAGAATGACGAACTTCCGGTTCCCTACATCCTCACAATT
GGGACGGGAACCTTTCTGGCTATGACCTTCATCTTCATCATCGTCGGAAT
TAAGATGAAGAACAAACCAAGAGAAGAAGACAATACGGGGGCTGTCAATC
ACGGACACGCAGCTGTCAATCATATCGCAGGAGCTGTCAATCAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000060 | genome | Sc0000060:523548..524594 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76080_cuf0 |
| Biotype | protein_coding |
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