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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76989_cuf0 >transcript:BL76989_cuf0-protein ID=transcript:BL76989_cuf0-protein|Name=transcript:BL76989_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=187bp
MADESPGDDMNHSSLLRGICRLFGGKIEAQPQCSTKYSSEFHDLFGINIS
ADQPDINQLMICHKCRLMFDRYKNLECPKKETFQPAKSPYAFTQHSESCQ
LCYGHTKSDHIYHTRKQCGRKRKKTGHTGPGRGGKKATEKTDVDNIDTNV
NNTTVSTTDKSKQVEGGTQTDKSKQVDGSMQTDITTH Run BLAST on NCBI mRNA from alignment at Sc0000209:889..3819- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76989_cuf0 ID=transcript:BL76989_cuf0|Name=transcript:BL76989_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2931bp|location=Sequence derived from alignment at Sc0000209:889..3819- (Branchiostoma lanceolatum)
GCTGTGTCTTCACACTTTCCACTCGCATAACCCGAGGTCCTCCCGCCCTC
TCTGAGATTTCGGGCTTCTACGCCTGCGTTGAAGCCAGTTCAAAGGTTAA
AATGCGTCATATCCGCCCGAGGAACATTCTGGAAGACAAGGGAAGACTCA
TTTTACGCGGCGATTGCTTCTAAACCCCACCAGAAACCACGCATTCCGAC
CGAAATGGCCGATGAATCTCCAGGTAAGGGTGGACTTTACACATTTTTCT
TTGTATTTAGACTGGTCTAAGTAAGTATCTTTGCGGAATTTGTCGAAATT
CAACATTTTTTTCTGGTTGTTTTGACTGTCGAGAGTCGATTACGCCATTT
TGTATTTCTGTGTATTGCAATGCAAAAAAGTGTCGCGTTTTTGAAGTGGG
CATGTAGTGTGCTTGGGAGCGCACGGCTTCTATGTTTTTGTATGCTTATT
TCACCACTTCAGACTTGTTTTGGCTGAGGAAACTAGTTGTACTTGCAGTG
CGCGGCATTTTTNGCTTGGGAGCGCACGGCTTCTATGTTTTTGTATGCTT
ATTTCACCACTTCAGACTTGTTTTGGCTGAGCAAACTAGTTGTACTTGCA
GTACGCGGCATTTTTTACGAAACCGATGTGTTTTTATGGATAGCTTCTAG
CCCAAACTATACTTCCACGTTGTTTGTTTTCATTTATACGTTTCTAAAAA
AGATTGTCGCGATTTTGAATGTGGCGTGGTCGGGATTTTTGGCGAGCGTA
ACGAAAAGTGGGGAGGGGGGCGTTGATCGATAGTGACATGGTTCTCGTTT
TCTTTATTGAATTATTTTTTTTTTTCTTCCTAAATATGTCGACGCTTGGA
ATTTTTTTCTTCTTCGGAGTGCAATTAGTAACATCTTATCGTTGAAATAT
ATTTCTGTAATTTTCAGAAATATGGGTCGTAAATATGTGGGAGATGGGCT
TACCTATACACACATTATGAAGCAGTCATTTTTGCCTGTATGAACATGCC
ATGCTATAATCTGTACAGTGTTCTACTAGAGTCCATTCCAAGTCACCAAG
AGGGTTTATGATAATATTTGTAATACTTTAGCAAAAATTCTAATAAAAGA
ATATCTGACTGACAATAGTTCTAAATTTTTCTAAAAGATTGAATATAAAA
ATATGAATTTATTTGAAGTCGATTATATAATTTAGAAATATTTTGAAAGG
AACTGCACAAAAATCTCTATTTAGAATAATTTCTAAACATCGATGTGATT
CTTTCACTTTTAGAAATATTTGCAAAAAAATGTAGAAAATGGTTAACAAT
GGTAGAATGGTGATTGCCCCCATAAAAGTAAGTGCTAATCCGGCCCTTCT
GTCTGCTTTTGTACATCTTTAGACTTCACTCCGGGACACTGTTGGGGCCT
TTGTGGAAAGCATTCTTCCCTATACTTCGCAAGGATGTGTGAATTGCTTT
CTTCCCAGCCCTCTGACCTATTTATAAAGATGTTACAAATAATGGTAAAA
AATGGTAGGAAATTGTAAATAATGGTAAATAATGGTAGAATGCCGTTACC
ATTATTAAAAAACTGTTAGAAATATCATATTCCATATGATGACTACTTCT
AAAGTTTTAGAAAACCGGAGAAATATTTATAAAGTTGAAATCACATTCAA
AATATTTCGAAAGTATGAAATCTCTCACACAAATAATTACAATAGATTGA
AAAGATTTGTAAATTAGGACAATAACAACCCTCTTGGTGACTTGGAATGG
ACTCTATGTTAGTTTGTCTTTTGATAATAAACTGCAATCACATTGTCTTA
CATATTTTTTGTAGATACATATACTTTGCAGAAACAGAGCTTGTACACTC
AAGTCATATTATTGTTCTTACCAACAGGTGACGACATGAACCACTCTAGC
CTATTGAGAGGGATTTGTAGGCTGTTCGGAGGTAAAATCGAGGCTCAGCC
ACAATGCAGTACAAAATACTCATCTGAATTTCATGATTTATTTGGCATCA
ACATCTCTGCTGACCAACCCGACATCAACCAACTGATGATCTGCCACAAA
TGCCGGTTAATGTTTGACAGGTACAAAAATCTTGAGTGCCCAAAGAAGGA
GACCTTTCAACCAGCCAAGTCTCCATATGCTTTCACACAGCATAGTGAGT
CATGCCAGCTCTGCTATGGCCACACAAAAAGTGACCATATTTACCACACA
AGAAAACAATGTGGAAGAAAGCGCAAAAAGACAGGACATACTGGCCCTGG
CCGAGGAGGAAAGAAAGCAACGGAGAAGACAGATGTGGACAACATTGATA
CAAATGTGAACAACACTACTGTGTCAACTACAGACAAGTCGAAGCAAGTA
GAAGGAGGCACGCAGACTGACAAGTCGAAGCAAGTAGACGGAAGCATGCA
GACTGACATAACAACACATTAACATTACATGTTTAAAATTCCACAGATAT
ACACAATTACATATTGTTGCAGGGGTCGTTCCCACTGGCTTTTTTGGCTA
GGGTGTGCTCCCTAGTTACCTTTATCTACAGGGGCCATTCCCACTGGCTT
TTTTGGCTAGGGTGCGCTCCCTAAGACTGTTTTGACAGGGGTGTTTCATC
CCCCTGGATTATCTGTGCTAGGGTTTCTTCCCTAGGACTTCTGTGCAGGG
ATGTCTTCCCTGGGTTTCTGTGCAGGGTTTTCCTTCCCTGTGGTTTGAAT
TTAAGACTTACCACTTGTCTGATTACATTACATATTTTACACATTCCACG
AATATCAGAAAGAGAACATTTATATACGAAACATATTAATATGTAAAACA
CTACAAGCTAGACACATTCAAAGCAAAATAAGCACTTTACAGGTACAAAT
AAGAATCAAAAGATTCGCATAAACATCATATCAAACAATCACATCATATA
AAAAAAGATGTGAGAACAAATGTATGCAAAC Coding sequence (CDS) from alignment at Sc0000209:889..3819- >transcript:BL76989_cuf0 ID=transcript:BL76989_cuf0|Name=transcript:BL76989_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1128bp|location=Sequence derived from alignment at Sc0000209:889..3819- (Branchiostoma lanceolatum)
ATGGCCGATGAATCTCCAGGTGACGACATGAACCACTCTAGCCTATTGAG
AGGGATTTGTAGGCTGTTCGGAGGTAAAATCGAGGCTCAGCCACAATGCA
GTACAAAATACTCATCTGAATTTCATGATTTATTTGGCATCAACATCTCT
GCTGACCAACCCGACATCAACCAACTGATGATCTGCCACAAATGCCGGTT
AATGTTTGACAGGTACAAAAATCTTGAGTGCCCAAAGAAGGAGACCTTTC
AACCAGCCAAGTCTCCATATGCTTTCACACAGCATAGTGAGTCATGCCAG
CTCTGCTATGGCCACACAAAAAGTGACCATATTTACCACACAAGAAAACA
ATGTGGAAGAAAGCGCAAAAAGACAGGACATACTGGCCCTGGCCGAGGAG
GAAAGAAAGCAACGGAGAAGACAGATGTGGACAACATTGATACAAATGTG
AACAACACTACTGTGTCAACTACAGACAAGTCGAAGCAAGTAGAAGGAGG
CACGCAGACTGACAAGTCGAAGCAAGTAGACGGAAGCATGCAGACTGACA
TAACAACACATTAAATGGCCGATGAATCTCCAGGTGACGACATGAACCAC
TCTAGCCTATTGAGAGGGATTTGTAGGCTGTTCGGAGGTAAAATCGAGGC
TCAGCCACAATGCAGTACAAAATACTCATCTGAATTTCATGATTTATTTG
GCATCAACATCTCTGCTGACCAACCCGACATCAACCAACTGATGATCTGC
CACAAATGCCGGTTAATGTTTGACAGGTACAAAAATCTTGAGTGCCCAAA
GAAGGAGACCTTTCAACCAGCCAAGTCTCCATATGCTTTCACACAGCATA
GTGAGTCATGCCAGCTCTGCTATGGCCACACAAAAAGTGACCATATTTAC
CACACAAGAAAACAATGTGGAAGAAAGCGCAAAAAGACAGGACATACTGG
CCCTGGCCGAGGAGGAAAGAAAGCAACGGAGAAGACAGATGTGGACAACA
TTGATACAAATGTGAACAACACTACTGTGTCAACTACAGACAAGTCGAAG
CAAGTAGAAGGAGGCACGCAGACTGACAAGTCGAAGCAAGTAGACGGAAG
CATGCAGACTGACATAACAACACATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000209 | genome | Sc0000209:889..3819 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76989_cuf0 |
| Biotype | protein_coding |
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