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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77974_cuf2 >transcript:BL77974_cuf2-protein ID=transcript:BL77974_cuf2-protein|Name=transcript:BL77974_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=172bp
MQASNVPQLIIKEVERNNRNRRTFVQVSRDTCGENFSPGEDNRVFFGFQH
PHPHGQPHAKQPIAVASVLPALPEDSQLSSSSRSRHYHMLTFLFVKRDYQ
QMGYGRHMTEHVERVMTSSLPRPVRVQSAAKAVPFFEKLGYTAIGEPIEC
VCAGTFLFRTLQNMEKHVTMQY Run BLAST on NCBI mRNA from alignment at Sc0000459:148741..151064+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77974_cuf2 ID=transcript:BL77974_cuf2|Name=transcript:BL77974_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2324bp|location=Sequence derived from alignment at Sc0000459:148741..151064+ (Branchiostoma lanceolatum)
ATTTATTAATGAAAAAAAATGATATTCATAAATATGATATTGATAGATTA
ATATAATATCAATATATATTTTTGATATTCAATATCTAAAAAGAAAAAAA
AATCCATGCACGGAGACGAACCCGGATCATCTTGGTCCGAAGCGCTTCGC
GTTGCCAGATCGGCCAAGCTGCGGTACGTAACTATTCACACTGGACGTAA
TACTATAACTTTACTATATGGTATCATTTATGCCGATTTTTGGTCGTTTT
CTTGACGAAATCATTTTTTTTCTTCTGCAATCTTGTGGAATAGATGTAAT
ATGGTCATTTTTCAGGATATCAAAGTCCGAAACCACAATGCAATGATATT
TCCGAACAGTTGTAGCAGTTACATGCGGTCGCCGTCCTGTGTCACATGCA
AATCTNATCTCGGTCGTCTCTGGGCCAAATGGGCTGAACTTTGGTATACA
GGTAGAGTTAGCACATACCCCCTGGTTTTTTTTTTTCAATTTTTTTTTAT
AAATGCCTTTAAAATGATTTTATTGAGTTTTTTTTAGCCATTTTAGCCCA
AAACCGTACATTTGTGCCTCCTTTGCTCTGGTATTACATTCAAATGACCT
GAAATTTGCTATGGGGGTACATTGAACAAATATTTAAAAAATCCCATTCG
CACTTTCGATTTAAGAGGGTATTTTGGGGGAGAACATCGGCCATTTTCCT
CATATGGGGTCACTGACCTTTAGGTCACATCTTTATTCATCTGGCCAGGT
GGACTAATTCGGTCAGCCAATGAGAGATCGCGTTGTAACATACACACGGT
TTATCAAGCTCAATCTGATTGGTTAAAATAGTCAATTTGATTAGGGCCAC
TACTAGTACTCTGACAGGCACAACTTCACTACTCCCTGGCTCCCATCCTT
GTGTTGTTATTGTTGTGTCCTACTCAAGTTATGTGCAATTGAGAAGGTTC
AACATGGGCTGGGCGATACATGTTGCATTTGCTCCTGCAAATGTTGCCTT
TCTAGTTTTGTTATTATTTTGACAACTCTACTACAGAGGTGGGGCCTACC
CCAACTGCGGGTAGGCTGGCCACTGCAGCAATACTCACCGTCATTTGATA
CCGTTCATTCCATACTCCGTACCAGCCGTCTTAGATATTTGAAGTGTTTA
TGAAACGTGACAATGTTTGGCAGAAGCCATAGCCTATATATGAAAAAAAT
AGAGCTAGCGTAATATATTTGAATAGTGTCTAAGAAGGCTCAGTAACTTG
TATCGTAGGTTTTTCGATCAACATCTCATACGTAATCGCATTCCGTCAAG
CCGATTAACATAAGCCTTCATCATCTAATCTGAATGATCCTAGGTGATTA
GTCCGCAGTCATTTCCTCTCTGACATACTAATCCTTCAAATACCTGTTGT
ATGACTAAGAAGGCCGTGGTAATTTTTTTTTACATTTTTGTTGTGTTCCT
CTAGGTTGCAACGCCAAATGCCATCCTTTCAAGTGATGAAACGCTGACCA
TGCAGGCATCGAATGTACCTCAGCTCATTATCAAGGAAGTTGAGAGGAAT
AACAGGAACAGGCGGACTTTCGTTCAAGTCTCGCGAGACACGTGTGGCGA
GAACTTCTCTCCAGGCGAAGACAACCGCGTCTTCTTTGGATTCCAGCACC
CGCATCCGCACGGGCAACCACACGCCAAACAGCCGATTGCGGTAGCTAGC
GTGTTGCCGGCCTTACCAGAAGATTCTCAACTAAGCTCCAGTTCTCGTTC
AAGACATTACCATATGCTTACTTTTCTCTTTGTGAAGAGGGACTATCAGC
AGATGGGTTATGGACGTCATATGACGGAACATGTTGAAAGAGTGATGACC
TCATCCCTTCCTCGGCCAGTCCGAGTTCAGAGTGCGGCGAAGGCGGTGCC
CTTCTTTGAGAAGCTCGGCTACACCGCTATAGGGGAGCCTATTGAGTGTG
TGTGTGCGGGCACATTTTTGTTCCGCACGTTACAGAACATGGAGAAACAT
GTAACAATGCAGTACTAGTATACACGATGTCCCTGTTACACACTGAAGCA
TGACGAAACTTTGTCAAAGTCTAATTAACTTTCAGGAAGGCGATTTTATA
GAAATGTTACCGAAAAAAAGGAAACTTGACCCTGATAGTCTCTGCAACAT
GTTATGTATGTCGGGTTGACTTAATTTCAGACCACGTCATGTAACGTACA
TAGGTCATATTTGCATGTTGATTCGATTATATATGGATAACATCCGCGCG
CGCATTAATTTATGTCCGTCTAAAAAGGTTTTTGACCATGCTGTGGGTCG
TAAAAAGCACCTGCAAAATAAGAN Coding sequence (CDS) from alignment at Sc0000459:148741..151064+ >transcript:BL77974_cuf2 ID=transcript:BL77974_cuf2|Name=transcript:BL77974_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=519bp|location=Sequence derived from alignment at Sc0000459:148741..151064+ (Branchiostoma lanceolatum)
ATGCAGGCATCGAATGTACCTCAGCTCATTATCAAGGAAGTTGAGAGGAA
TAACAGGAACAGGCGGACTTTCGTTCAAGTCTCGCGAGACACGTGTGGCG
AGAACTTCTCTCCAGGCGAAGACAACCGCGTCTTCTTTGGATTCCAGCAC
CCGCATCCGCACGGGCAACCACACGCCAAACAGCCGATTGCGGTAGCTAG
CGTGTTGCCGGCCTTACCAGAAGATTCTCAACTAAGCTCCAGTTCTCGTT
CAAGACATTACCATATGCTTACTTTTCTCTTTGTGAAGAGGGACTATCAG
CAGATGGGTTATGGACGTCATATGACGGAACATGTTGAAAGAGTGATGAC
CTCATCCCTTCCTCGGCCAGTCCGAGTTCAGAGTGCGGCGAAGGCGGTGC
CCTTCTTTGAGAAGCTCGGCTACACCGCTATAGGGGAGCCTATTGAGTGT
GTGTGTGCGGGCACATTTTTGTTCCGCACGTTACAGAACATGGAGAAACA
TGTAACAATGCAGTACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000459 | genome | Sc0000459:148741..151064 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77974_cuf2 |
| Biotype | protein_coding |
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