transcript:BL78011_cuf4 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL78011_cuf4
Unique Nametranscript:BL78011_cuf4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL78011_cuf4

>transcript:BL78011_cuf4-protein ID=transcript:BL78011_cuf4-protein|Name=transcript:BL78011_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=208bp
MDNAGRAVRRRNSGACLQDGFVHRRGRSQSEQLDMPEEVLRSLRRGRRRS
SAVRVLCDLSLLGEDIRQVMFSLSYLPSPGQLTVTIIKARNIVPKSHLLS
PPDSYVKVALMCESKKIDRKKTGVITGTTDPIFNESFLFDVAEVDMKGVF
LSLVVQVTSGTSLGGSEVGPWSEQWNEMLENPRKPVTSWCTLKDVTSDTR
RGSEDVQS
Run BLAST on NCBI

mRNA from alignment at Sc0000389:159537..174635-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL78011_cuf4 ID=transcript:BL78011_cuf4|Name=transcript:BL78011_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=15099bp|location=Sequence derived from alignment at Sc0000389:159537..174635- (Branchiostoma lanceolatum)
CAGCCAGATATGCAAAACCGATCGATGAAGAAGGATTTCGTGGATTCGCT GCCAGATACTCGAGGGTGACTTGGGTGCCGTTTGAACAGCAGGAAGCACC TCCAAGCTGAACATCTTCAGAAGGCCAGTAGACAACACATCTTCGGTAAG ACAAACTATGTCTTATAATCAATAGAGGTTCTTGGCGTTCTTGTTCTTTG GGCATGTCAGTCATACAGGTGAGCGGATTTTACATCTTGTGAACAACAGG TAGAATCAGGGCTATGTTTGCGAGGTTGTACTATACCTTACCTCAGCACC TTAGTTCATCCCGTGCCTTTGAGGCACATCAGGCCGTCCTTTTCTACATA TGTTGGCTTTGTGCTTCTCTCTCTGCTCTGTACCAGGAGATTCCAGTAGC TTCAAGGTCCTTCTCTACATTTGATCTCCATGTCAATCTTAGCCTTTCCC TGCTTCTTCTTCCGCCGAGTGCTTGTACTATACATCAAGGCAACTATATT GCATCTAAGCATGGAATTTGGGTAGCTTTCATGGCATGATATTGAGTTAA TTGCCTCGAGCTCTTTCTTTCGTTAACAAATGTTTAATACTATAAGCTTT AAGGCTTTTGTGGTATTTTTTAGAATTTAATCTGTGTTTTAGGCCAGAGT AGAATGTTTCCATAATTGTCCTGTGTTGTTAACCTGGATATCCTCAAGCA AAACAATCTTATTGCTTGAGATATTATTGTATAGTAATCAATGTAAAACG TAAACATGCGTAATCCACGGCGATGCGAGGTCTATGATTCTCGTTAAATT GACCATAACCCAGAAATTAAGATTTCACGTTTGGGAAAGTGCACAATTGT CGTTCGGCAATCAATGTAAAACGAACTTAAACCACGTCAGGTTTATGATA TGATTAGCGTTAAAAGGAGATTGTTTATAACCCCCAAATTACTTTAAATC TATTGCGGTCATTGCTTGCTTCCCTTCATATAATCTCCATTAGACGAACA TGATTTACATCTTATCTGAAATCGTAGCATCAACTTCAGATTGCAGAACG CACTGTATGCATTTTTCTCGGTTTGCCTATCTTTTGCTGATGAATCTTTA TCACATTGCAGTTGGCAGTTGCTCAATGCATTTCTACTGATGCTTTTTAA TTGGGTCAATGGTTTCGGTATGAAGCGAAGTGAACTTGACTAAGTGGTGT TAAGATATTTGCAACCTGCGAGGAGGATTCATGATGTGAGGGCAGTAGCT AGCTATAGGTTAAGTCTTATCCACATTTCCCCATCGCGTCGGTGGGGTAA CCGCGATGGGGTAACCACGTTATGTCGTTATCGCATTTCAAAGCTTGGGA ATAGAAAAAGCTTTAAACTGAAAATCAAACTTATTAAATCATTTAATTCA TTGATTCTGAATACAGTGAGATCACAACAGTAAAGTGATAGAGCCGAATT GGAGAGGTCGAAAATGAATAACTGCTTAAAGAGAACATAAATTCAAAGCA CGAGGATGTTTAACACTGTAACAATGACGTCAGCTTCTTGCCTTTTATGT GAGGCACATTATATATATCAAGATATAGGCAATGGAAATTCCGTCAAAGA TAGCAGACGAATACACTTATACTACATAGTTTGTTGTAGGGTACATTAGT TTCCAATACTGTTGTACCAGACATTGTAAAATATGCCATTTTTAATCAGT AAAGTTATTAGGCTCCCATCAACAACGGTGGGAAAAGAAATCACCGGCGC ACTATACATGACAACATGAAAGCTAGCACATCGCACGTTGTCTCCCTAAT CTACAGAAACCGCGAATGTCATATCTATTCAGCTAATCAGGCACTCGATC ATAATTGCAACGACCTGTCTAAAAGCACTTTAACAGCAGGTCTTCCCACC GTCAAAATGTGTCAATTTACATTAGGATCGCAGGGATATAACCAAACAAC TCCGCTAACGGTAACCAGTGGTAGGGTCGTTGACCTCAACCTCTAGCCAG AAGATGTCATTCGTGTTACTCTGGACGCCATGAGAATGTATTGTGTATTT GGCACATCCCTCGTGTATCAATTATTACTCGTACGTGATGTTAACATGTT TCGAACAACATCATATTCGATCAAATACATGAAAACGCGAAGAGGTTTGA TTAGCTTATTCGAGGTGATGTCAGGTGTGCCACTTGATGAAGAGCTTCTG GAGACCTGATGCCGCCCGTTAAAACTCGGGTCAACGCTCGGAGTGACCTC TATCAGTCATAGAATCCACTCAGCAGAACAATGTGTCGTGTGTCATACTT AATAGGCAGGACTGCTGCAGCACCGGATCCCGAGAGATCATAGAAAAGTG CTGGGATTTACTGAAGAAACAGGCCAAGGCCATACCTGCTGCTGTGTTTC ATGTTTTTATTGCAGGTCTCATCTTTTTTCTGCGCCGTGGTGACGATAAA ATATCTGTTTTTCTATCAAGGGGACGTTTCACGGTACATTAAACACTGGA TATCCGCTCAGCAGAGGCCAAGCGCTTCAGCTCCAGTTGTAGTATATCGC TTTTTCCAAAGCATTCTTTCAAAATACACTACCCAAGTCATATTTACCAA CTTGCAAACTAAGTATATTTCTTTTAATTATGAAAATATGTCATCATATA AGCCTATGGCGTGATTCATTTTCAAGTCATACTCATTTCTACTAAGTTGT GTTTTATAATTGCCGTAAAGAAAGGCTTCAAAGCTTAATGCTAAAGTAAT CAATATTTGAATGCCTTTGATGTATAATAACTAAATGTATTACGTAAAGC TTTTCTCTGTAACTGCTTTAATCAATACAATAAAGTAAGCTAATGACGAA ATGTTTGAAGCAGTGATTGTCCAAGATTTGCACTATGCAGGTGGTTAATT GTGCCGTTCAAGACAACTTTTAAGAATTCAACTGGGCTTTATGGAGATTA CACTAAACTAATGTCAACAAATAGACACTGTAGTTTAGGGGCCTAGTTCA GATTCATTGTAAGGATAAACATTGTATCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATAGA TAACACACGAAGAAAAAAATGAACACGAAAATGTCATTTTACACTTCCTT GTCAAAGTTTCCAAATCGAACGTTTCATCTTCGGCAGTATAGTATGGACC AGATCATCGTTTACGTTAACAGATGACACTAAACGTGAACGTGATATCAA GGGATGCGATTTCCCAGAATCGAGTAAAGCTTGCTCAACACTCATAAAAG CTATAGTTTCTAATCGCTTGCCCCTGGCCAACGACATGGTGATAGTTATA CTCCGGATGATCGTGTGGTCTGATATCAACACCAATAACGTACCAACTAA ACGCACACCTCTCGCTCAGAGCCATGCCTTACAGAAATCAGATAAAGACA CCTGATCTTCTTTCGACATAGATGTTAAAACTTTGGAGCAAAAACAGTCT TTGAAACGGTATGTACATGTAAAGGACTCAGATTCTCCTGCTTGTCATTT CATTTCATTTAGGTCAAGCCGTTTATACGTTCTTACTCTATGAGAATGAT TTTGTACGTTCTTTAGAGCTTTAATAGGGGGCACGCAAAGCTTAAGGAAC AGTAGTAATTTCAGCCTACACTCTGCCAGATGTATGTACCCTGTTCCGTA TCTCATTGTAGAGTACCTTAGACCATATTCATCACTTTATAATCTATTAA AAACGGAGAAATTAAAAGGCACAAAGTTGCTATACATAAAAGAAGAACAA CAACAACCAGAAGAATGTTTAAAAACTTGCCAACAAAACACGAAAATGGT ATGCACGCATGAAATGCAAATAGGGACACCAACATGGCGGCCAGCACCTG CCTCTTTCATCCACGTCACCAAGCCAGGCGAACCCGTCAATTCTGCTTTT GACATGTAGCTTTCCCTTATCGTAATCATTCTAATCCAATGACTATAGTA TGATGAATTTGTTCATTTGGATCATGCACAAAAAGCAATTTGTTTTGATT GCTGGTGTACAGGTGTTCAATAGCTAATGAAGATTGACATATACATTGCA CGGTCATATATTTCATATGTCAGACATCTGGATGAAGATATCATTTAAAC TATTCACATGATATGATTTAATTGATAAAACATATTGCATTGTCAATCTT TGTTGTCATGATTATTTACAAAATCTCAGACCTGAAACATAGAACGAGCG TCATGTTCATAATTCGAGCCTCATATGCAATAAAGAGTGTAGAAATATCA CAAAGAAGCCGATTTCCCCCCGGGTCACAATTACCTTCCAATTTGATGTA TACGTATTTGTCTTATCTTCGCGCTACAGATGAAGAGAACCCGGTTGTAG CTACAAGCCTTCCCTTCAGGGTGTAACACCCACGCTTCGCTTTTTCTGGC ACAGACCTTTGATACTGCGAATCTTCTGATGAAAACGTTTTATACTGCCG CAAGAATTTTACATGTTGACAGAGGGAACAAATTATATTCTTACAACCAA AAACGTGATCAGTCTAGTTGCCTATATCTCTTTTATAACAAGTAAGTAAA ACGTTTTTCCTATAAAACCAAATTGGTGGAAGTCTTACACAGTGGAATTT AGCTTCGAGATAATTGGATCAATGTCTAATATAGCAACCCCCCTTAGAAT TCTTGGACACTCCCAAATATCTGTCCAAGCAAGCAAAAAGCACCTTGCTC AAAACCTGTTGTTTGGCTTTTCCATCGTGGTGTAAAATTTCATGGCCATG GAGAGTCATTCAAAAGTCGTGAGGAAACTTTCTCTGGATATTCAAAGACT GAAGACGTCTGGAATGTAGGTTATCGGCACCTTAATATCACCAATATTTG ATTTATCATCTTTTTTGCAATCGATATTTCAAAAAGACCTAACGTTTGCC TTCGATTTTCATGTCGTCTGGCCGCATCAGCAGTGACCGATTGATCTGCA TCGAATCGTTTGATGATTGTTTATTTGTACTTTGTAATTGATGGTTTAAT CAATGTTTGTTGTTCATTTGATTTGTGGTGATGACAAGACTTAGTTAGAG CTGATGATGTGATACTGACGGTGATAGGTTACCTGGACAAACCGTTCGCG GCCCCGAGAGGATATACCGCATGACTGATTACGAAAAGCTTTATGATTTA TCACTCTACTAAAGTGCATGTACGTGCATAAACTATCTTTTCAGTATTTA CATATTATACTTTAAGTATTGCAAATCATAAGTAAACGTTTGAATAATGA TCACCTCTCTCTGATTGCCTTACCGTAGTCTTAATTGCTTCCAAAGTCAA TTATTTATATCAGTCCTGTTCGGTAGCATTAGTTTGATGGCAGTTGAACA AACTAGCTGAATGTTTCTATATTCTATCAGCTAGCATATGCAGTTTTGAC TTACTCATGAACTAGTACTAGTTTCTATTACAATTAGCAGACATTAGATA GTATATCAAGCTGTGTTAAAACGGTGTAAATACGTACAAACAATTTCGTT TTAACTGCCTTGTCCACTTAAGGCATTAGTAGACGAGTTTAGACTAAAAG CCCTTCAAATGCACATAAGTAGCTCACTTGATCGATTTCAAAGTAAAAAG CGTTTGGAACCCACAAGATAACTCAATGGTCAGCTGATCAATGGTTCTGA AGTTCCAGGAAGACATGCGGTCATTGAACGCTTAGTGGTATTGCTGTAAC GTTGTATTGGACATGGCGCCAGCTCTTGTATATGTAGCCATCTGCACAAA GATATGGGTCATGTGTGCTTTTACAAAATCGCACAGTATCAGTTATCCGT TTAAGCTACAAGGTCAACGTGGCAGCCTGTGTCAAGGGGCAGATTATGTG TTGATTTCTTTCCAATTTTAGCAGCATTGTAGCCTACTACGCACTACACC TAATGGGTGTCATCTGCATAAGATCAATGTCTCCCAAACCTTGTGGCCGA GAGTCGTTAGAGTTGTTCACACACTATTGATCCATGACAGACAGTTCGGG TGTTCTCTCCCTGTATGTAAAGGTTGGCTGTGCCAGAAGAGGGCGACTCT TCTGACGACAAGATGCAGGCACGAAACAGTCGACGACTTTCTCTTGGTAA GATTCAGCGTTATGTATATTTGGGCATTCGCCTTTGATTACCACGTATCT TATTACGTATTACTTTATTGTGTATCTATGTCATGGATATCGTAAGATTA TCCCTTAGCTAGAGGGTATCCCAAAGTACAAAAAAAATTCATATTCTTAA AATTCTAGAGGAAAGGGGTTGGGCTATATGAGAATACAACTTGGCCTTCA TTTTTTTGGTAATATATTTTGTCCTGTAGACATCCAAAGCAAATTCTATG GGTGAAATAGATTTACATGTCACAAGTGTCATAAAAAATATTGCACTTCG CATGCACAAGCCACTTAATTGACAGATTTGCCGATGGAAAAAGTAGCACT TTGTTTTCGGTAATCTTCACAAGAGGATTGCTGTTATAAGCTTTCAACCA TTCACCACGATTTTAAGTGTTCTTTAAATCTCTTGTTTTGAATTCTAGAT AGATATCAAGTATTCTCGCTGCTTTGTATCATAAGACAGACTGTTGCCTT ACAGCTATGCAAGCCCCTATGAGCTGCATAGTTTTCTAACATGATTTACT TCCTTGCCTCTTTCAAATACAAAAAGACAAGTCAAAAACTGATTATATAT ACAATGTCTTAGTGCCTGGCAAACGTGGAAGCCTAAGCAGTCTTGCATCT TATTATGCAATCAATGCGTGACTAGTGCTTCATGATCTTTGGGCGGCTAG GGCAAGGAAAGCTAGCGAGACAAGCAAAGGCCGCACTGATTTGATTTGAT AGATGACATATCCACACGCTCATGAATTCCCCTTGTTCTCATGAAAAAGA ATCACCTCCTCAAAAGGCACGACTGTGCCGACTCATAATGCCAAAAAAGC CCGCATGGGCGTCGTATCATTTTTACCGCAAAACCTGATGAATTTGTTTC GTTCTTGGGTTTTTACGTTTCTCTGTTGGGGAATTAACGCTGAGAAGGAG GAGGAACAGGAAAACCTACCTCTTCCATCATCACCAACCTACCACATTTA TTATATACACCTGTTATATACACATATCTTGTTTGATACATTATGTTCTG TGGTTCAATTTGTGTTACCAACTTTGTCCCTGTAGTTTTGACATTTCAGC AGCGTTTCGTTTTGCTGGTTCTTTTCCGTCCTCTCGCATTAATTTTACAG AGGATGCCATCTATAGGATTAAATGGCCAAACGTAAATTGCAGATAGAGT TATAAATTTACATCACTATTTGAATAATTCAGTGTTTAGCTTTTGCGTCA AAAATAGATTCTCTTTAAGACTGAAAAGTATTTAGCTCCAGTGATCTAGA AAGCGTTTTAGTTGCGCAGTGATGGAACTCGCGGAAAACATTGAGCCACA TATATGCATGTGCCGCATCAGATGCGCACGGAAAGTAAAACTATGTCGTC TGTGAAGAAACCGTTTACCACAGAAATCTTTCAAACATACATTAAAAGAT CAAAGACTTACAATACATAGGTAAAGATGTTAACGTTACCTGAATTTAGA ATCTGCAGCTACTTGTAGCATCCTGATAATGGTGGCGACTTTGGTTAGTG ATATTTCGTGAATGTTTTTAGGTACTTGAAGGATTTGCCTCGTCATCGCG CAAAGCCCAGCAATCATTATCGCCTGCCAAATGTTTGAAGAGTTGCCATG AATGATGTAGCTACTCTACAGTTCAGTTACAGGTGAAACTATTGTAGGCT TTAACAGACGTTGAAATACAAAATACATATCAACAGCTACAGTAGTTCAA ACCCCACAGTCATAGCCGCACATTTACTTGGGCAATTGTCTTATTGAGGT CACCTGAGTTAGCGCCGAACGGCATCCGATCCAAATCCTTGCTATCTAGC CCCGCCAATTGTAAGCTCCTCGCAATTCAGCACCTGGCTGCCAAGAGAGA GTAGTCGGTCCACCAAATAATGAAGATAATAATGATAATAATGATATTAA GACGGGTGAAAGTATCTTATAGTGGGCCTTACTAAACGTTGAAATATATC TCAACATGCGACACTATAATTCCGGACTGACAGTCTTATTGCGGAAAACT TTATTTTTTCCAAGTAGATTGACCAAATGAATTAATGTCTACGACTACAA GTATTATGTAACAAAATGTCATCAATATTTTGGTAGCAATTAGATGTCTC CATGGACATGGGCAGTTGTGAAGCATTCCCCAGATTTCTGGGAACCTAAG ACAGAATTTGAGAAAACTGTATACATTGAAATAAAAGATATTTCCCTAGC TTTAATCATTGGTGTTCTGCATCAATATGCAACATCATTAGTATCAAATG AATGACTTTACTGTCTTCCCAAGCGTAATTTCGTCCAGTTTTACGGGATT TGACTGTCCGGAATTATACATTCGCCTCTTAACCTTTAGCACATTGAGGT AGCTGTTTAGCACCCAATTTCCCATTGGTTACAAGGTTAGGTAGCAGGAA GAAGGTTAATATACATATATAAATTGCTGTTTTTCGTCCTTAAGACGCCC GCTTCTCCATGTTGACTACATCTGAGGGAGCTGGAGAAGAAGGAATGTTC TTCTCTAGAAAAGACAGACGTGGTTCGGGGTCTCCTGTTAAAAGGTAAGG GAAACCACACAGTGCCATATATAATCAAACATCTAGACGAATGTGAACGT CTAAGAGAATTTCAGACTATAGTATCAATCTTATTCAGTTCGGATTGTCA TATTTGACCCTGTCACTTCCAGGCTTTCCACCTGCTTTGATTTTTACATA TTACATTTTTCGTACAGGTATCACAATCATTTAGAAAGCCATCAAATATA GATAACTAGATCTATCTGAACAAATGACTTTGCTCGTATAGTCTCAACAA CTAACCAATCTGTATATGGATGACTTGCTATGGTTTGAAGAATATTGATT AATGTGCATTTTGTTCTCATATTATTATTTGATTTTCCAATAGACGAATG TCGCGGACGGACAACCAGCTGCCCAAGGAGACTCGCGAATTTACGAGTGA ATCGCCAACTAGGTCAACAGACTCCACAGAGAGACATGTACGTTGGCAGA TAGCCCATAGGCATATGTAAATTCAGATCTAAACCAGATTGCATTTCTGA GACTTTCATTAAGACATGAAAGAATTGAATCTGTACGAGATGTAGGGACA TAAACCAAATCATGTTCTGTACATGCGTATGTATATGTTTATGTCACAAA TCTGAACACTTTGTGAACAATCTAACTACGCTATTTTATCTTGCTACAGA ATTTCTATTCAAATCAAGGCACAATATATCTAATCATAACATATGTATAT ATGACTGCACAAATTAGTTGTTTCAATTTATGAAATAAAGCACTATGTAT ATATGATGTTCATAGAATACACATGTTTTCTTGAATGTGACTTTTCATAC AATGTATGTTTTAAAATGATCAGGCAATCGAAGATATGATTTCACCCAAA CTTCTAAAACGAAATCCAAAATCAATCTCATTTCAAATCAACAATATTTT TATATATTAATTTCAGGACAATGCTGGTCGGGCAGTTCGACGAAGAAACT CAGGTTGGTTATGAGAAAAATTCTGCATTGCATACGTCTTGTGTGATGAT GAACATCGCTTGAGAAGCTTGAAAATTCGTTAAACAGTACATGTCAGTGA CCCCCCTCCTCAGGGACAGTGCCAACCATTAATAATTCTTCAAAAGGAAT TTTTTTTATATCTCTTCTGTAGGGGCTTGCCTTCAGGACGGCTTTGTACA TCGCAGAGGCCGGTCGCAGTCGGAGCAGCTGGACATGCCGGAGGAAGTGT TGAGAAGCCTCCGCCGAGGCAGAAGAAGATCATCGGCGGTTCGTGTACTT TGTGATCTTTCGGTAATACCCCCATAGTTTCTCCACGAGAATAAAATAAG AAAGCGACAATGCCCCCCCCCCTTAGGTCCACGAGGCCTGCTATGTTCTT TTATGATAACAATCGAATAAACCACCGAGCGTAGCTGGGACAACAAACCA CGGATGTTGGTTGGCCAATGGCATCGAGGCTTCATAATCAATATCAAATG TGGGCCTCTGATTGGTTATTTTTTTTGTCTATCTGATAATTTTTACTGAT CAACATTACCAAACCCACAGCTATTGAACAACAGACGGAAATGATAAATA CGATAAATAGTAGAGAATTATATAACTGGCCATAACTGCGTTATGTTGAA GAAAGTAATTATTGGGTTTTTGAACCTTTGTTATCTGGTCACATCTACGT TTTCGATCCTTGTGACTTTGTTGATGTGAAATTTATGGACCTGGCCTGAT TCCATTGCAATTTATTACTACATCCCCCGTCGGCCATTCAGGTTCTAATC TTTACAGCAAATCATTTACACGGAATTGGGCCATATAAAGATCCACATGG TATCTTGAGGCAACTTGTAAATACCTGTCGTTACTTTCAAGCGATTTATG GCTGCTATGTGGCTGGATATGGGTTGAATTCTAGGTCGCTCCTGATGCAA CAGATTGCTGACGAAGCTGTAAATGACGTGTTGCTAGATTTAGCAGATAT GGACATGTTTTTGCCGGGATGACACATGAGTAGATTATTGCTAAGCCCAA ATGGCGCCCGCAACTTAACAATATAAAGATAGCAAATCAATTATGTAATA TTCATGAATAATATGAGATATAAACTTTCTTTATCAGTTATGAAGAATAC GCATAATTTACGTCCCAGTATGTTGGTCTATACTATTGTTACATGCAGGT CAAAACTCCTGACAATCCCTTTTATACNTGTGTGATGATGAACATCGCTT GAGAAGCTTGAAAATTCGTTAAACAGTACATGTCAGTGACCCCCCTCCTC AGGGACAGTGCCAACCATTAATAATTCTTCAAAAGGAATTTTTTTTATAT CTCTTCTGTAGGGGCTTGCCTTCAGGACGGCTTCGTANCTATCTACCATC AAAGAAAATAACATTCTCGACGAGGGTAAAATAACATGAAAAGACATTAG AATATATATTCTTCTGGGGAATATTAGATATCAAAGTGCAATTTTTTTAA ATTTTAATAACATATGGACAATATTCCACGCCCAGGTATTGTAGATGGCT AGATGTATATACAAGTATAATGATACATATCTCTATGGGTCACATGCTTT TTCTCAATTTCAAAGTCATAGCAGATTCTTTTTCACAGCTGCTAGCCCTA GAGTGGGTATGATAGTGGAACCAGTTGAATTCAGAGCAGCGATCAGGTCT TGAATACACAGCGTGTTCATTAAAGGCTTTCGTAGACTAATTTGCCATAG ACTCATAGGGTTTAAGTCTGGGCACACGTTTTAGTTTTTGATCTACGTAA CTGTTACAAGTTTTGTTACCCTTCGTCCATGGGGAAACCTGTCTATGAAA AATCTTAACAAACACACCTCGTATGCATCAAATTAAGCACTGCTTTGATT CAACTGACACCGCTTTCTAGCCTAGTAGAATGTTACATGCAAAACTGTTA AGAGTTACAAAATTAGAATAAACATATCGAGGTATATTTCATGCACTTAA TTTGAAGTTGTTCAGGGGAAATCTTTGTTGAGCCGCCCTCTATATGTCAT CAACGGTGATTAAAAGGAAGTCGTGACGCACTTTACCAAGAGCCTATTCG TTAAAGTAATTTGTTACACCTACGCTCTCTCTAACCCAGCATTATCTCTG TTACTGCTGCGGGGTTTCTAATGACAGCTGATGTAGGAGCTACAAATTAC CATTGACTGAAATAGGTCAATTTTCGACAATCTAGTGTTGCAAGATTCCT TTGTAATGTCACCTTTCAAATACTCAAGTTTCTGGTGAAACCATTTCCGT GTACTGTGTCCCATCATAACATCTAAAAATCTTCTAGCTGGAACAGTTTT TAAAACGCGTCCCTGACGTAAGCGACCTTTGGAAAAAATGTAACCTAGAA TGTTACTTTTGGAGATTGTCAAATAGAATGACAAAATTAGGGGGCACCCG GATTTGAACCAGGGACCTCTCGATCTGCAGTCGAATACTCTACCCCCAGC TACACCCCCAGCTCTGTAGAATTACGTCTTTTAATGTCTTTATCATCTTA ATATCTTGAAAATAAGTCTAAAAGAGTACTTTAATTTTCCTCGGGGCATC TCGAAAGAAGTATTAAATTCATTTCCTTTGTTGCTTTCTATCGATTGATG TGCAAAGGTAACAAATTATCAGTTACTGAAACGAATTTCACCTCTTGTAG CTTCTAGGAGAAGACATCCGCCAGGTAATGTTCTCCTTGAGTTACCTGCC GTCGCCGGGTCAACTGACAGTTACCATCATTAAAGCACGGAACATCGTAC CCAAGAGCCACCTTCTTTCCCCTCCAGGTTAGTCTATAGAAATTTAAGAT TTAATGTTGGTTGGTCAGTAGAAGAACTATTTAATTGATGTAAAACATTT GATATAATTGCTACATATATCATACTACGGTTGCGTTCATATTTCTTAAT GCCTTTGTCTCAAACCCTCTTGAGCTTTGTAACTTGTATCCATTTAAAGA GGTTACGATATTCCTCCTTATTAATCATGTTTTTTTATCGATGAATTCCT TTTTTCGATCCACTAATGTTTAATGCATAATTTTATATCTTTATGAACTT TGTGATCCGATATAATTTGCAAAAACCATTTCAAGCCAATCGTTTTGGCA ATGAATACAAAAAATGTCGTGTCGTCAAGTAGGGGGCACCCGGATTTGAT CCAGGGACCTCTCGATCTGCAGTCGAATGCTCTACCACTTAGCTATACTC TATATATTTCTGTACATATTCAATTATTAAGATGCAACGTGCGAACATTC AACAAGATTTTAAATAAAACTTGGTGACTGTCGTTTCAGATTCTTACGTC AAAGTGGCCTTGATGTGTGAGAGCAAAAAGATAGACAGGAAGAAAACGGG GGTGATAACTGGAACTACTGATCCGATCTTCAACGAGTCCTTCCTGTTCG ATGTAGCTGAGGTGGACATGAAAGGAGTGTTTCTCTCGCTAGTCGTACAG GTTACTTCTGGGTAAGTAACAGCTGCAAAACTGGTTTCAGCCACGTTCTG CTATACTAGTTTTCAGTGACTTTAGTCATTGTCTAAATCTTTGTCGCGTT GTAAAAACACTTGTCTGGATATAAAGTAACAGTTAACTTGTCTAGGTGTT CTACTAACGCTATACTAGTTTTCGGTAGGTGACTTTCGTCATCATTCAAA CATGTTGCAAAACCCTCAAAACGAGTTGAAATTTTGTTTACTAGCCATGA GATTGACCTTCGACCTAGACCACAATGCATCATTCAGCATTGCGCACTTA GTGAACTGTGAGGCGGTTTATTGTAGAATTTCTAGATACCTTTTAGATTC ACATGAAAGTTAGACGGTACAACTCTACAACTAGGTGAGCTAGATGAGAG AATGTACAGTATTCTAGAATTGCACGCATACTTCACACGGATTCTATCGT TTTAAAGAAAATGTTTTCATGCTGCTATGTCCATAGGACATCGCTAGGAG GCAGTGAAGTTGGCCCATGGTCAGAGCAGTGGAACGAGATGTTAGAAAAC CCCCGGAAACCTGTCACCAGTTGGTGTACCCTAAAAGACGTGACGTCAGA CACAAGAAGGGGTAGCGAAGACGTCCAGAGCTGAGGCACAGACGACGGAA AGGAAGAATATAAAAAAATATATCATCGCCAGATGTATAGATAAATGTTT GTATAGATAAATGTTTATCATACTTCTGTAACTTTGTTGAAAATACAACT AAACATTTTGTGATAATTGTGACCAGACATGTCGATGAGGTGAACTAAAT GATGTATTTGTTGTAACAAATCATAGAGTTAACTTCACTAGAGTATCATA GAGGTTATCATATATTTCAATTACTAGTAGTGCAAAACTTCATACGTTTA ATTGTGTCTATATCTTCGGTTATAATCGCTGTCAAAATATACTTTTTAGA GATTCATATATTCGTGTTTGGAGTTGTTCACTCATGTATCGAATACTAGA GATTCATCTATTCGTATTTGGACTTATTCACTCATGTATAGGATCCTAGA TATCACATATTCGTGTATTCATCGTCGATCTTTGATGTTTTAAAATGTTA TGCCTGTTTCCACATCGCCCCGTGTTAATGGTCAACACACGTTAAGGCTT ACCGTCACTGTGCACTATTGTACTAGTACAATATCATCTATATTACCATC TAATTCTAACCTTTGTAGATTTATTTTAATTGAGTGCTGTTTGGCAGTTA CTGCAAAATGTCAATAAACAAACCTTAAGTGGAAGTTCTGAGTTGATTTG ATGTACGAGCGAGATCGAAAAGGTTCAGTGAAGCTCCCGGCACCATGTGG CCTACTCCCGTAAGGAGGACACCTAGGCGACACCTATTTTCACGGGACCA AGCGGTAGTCACAAAGGTTCATAGTCTATTAACCCCAGGCCTAATCTTAC CTTCAATCTCGGCAAAGTGTGACAGATCGCCCCAAGGTGTGTCGTTTGGT ACCCGTGGGAAATCCCATATAGATCAGGCGGTAACGAAGTAGAAAACGGA TTGGGCTGATCCTTGTACGATAACGGAGGTTGTCCGTATACAGTAGTCCA TCTTTTTACAAGCATCGCCTTCGCCAAGTAGGTTAATGTTTTCTGTGCTG TTTGTAAGTCAATATTTTTGTTAAATGGCAGCATAACTCATAAAATTGTG GATCGATCTTTATGGTATTTGGTCGATTGTGTGTTCCCTGGTGCCTTTCT ATTGTACTGAAGCTGAGCTCTTGACATCTCGTCGTCTTAATATGCTATGT GAATTGATTTTGGGGCAGACAGCTCTTTTGTTCTGTTCATTTGGCATATT TTTGGATTCATGTCGTATCGAAAAAAACCAATAAAGAACCAATCTGAAC

Coding sequence (CDS) from alignment at Sc0000389:159537..174635-

>transcript:BL78011_cuf4 ID=transcript:BL78011_cuf4|Name=transcript:BL78011_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=3762bp|location=Sequence derived from alignment at Sc0000389:159537..174635- (Branchiostoma lanceolatum)
ATGGACAATGCTGGTCGGGCAGTTCGACGAAGAAACTCAGGGGCTTGCCT
TCAGGACGGCTTTGTACATCGCAGAGGCCGGTCGCAGTCGGAGCAGCTGG
ACATGCCGGAGGAAGTGTTGAGAAGCCTCCGCCGAGGCAGAAGAAGATCA
TCGGCGGTTCGTGTACTTTGTGATCTTTCGCTTCTAGGAGAAGACATCCG
CCAGGTAATGTTCTCCTTGAGTTACCTGCCGTCGCCGGGTCAACTGACAG
TTACCATCATTAAAGCACGGAACATCGTACCCAAGAGCCACCTTCTTTCC
CCTCCAGATTCTTACGTCAAAGTGGCCTTGATGTGTGAGAGCAAAAAGAT
AGACAGGAAGAAAACGGGGGTGATAACTGGAACTACTGATCCGATCTTCA
ACGAGTCCTTCCTGTTCGATGTAGCTGAGGTGGACATGAAAGGAGTGTTT
CTCTCGCTAGTCGTACAGGTTACTTCTGGGACATCGCTAGGAGGCAGTGA
AGTTGGCCCATGGTCAGAGCAGTGGAACGAGATGTTAGAAAACCCCCGGA
AACCTGTCACCAGTTGGTGTACCCTAAAAGACGTGACGTCAGACACAAGA
AGGGGTAGCGAAGACGTCCAGAGCTGAATGGACAATGCTGGTCGGGCAGT
TCGACGAAGAAACTCAGGGGCTTGCCTTCAGGACGGCTTTGTACATCGCA
GAGGCCGGTCGCAGTCGGAGCAGCTGGACATGCCGGAGGAAGTGTTGAGA
AGCCTCCGCCGAGGCAGAAGAAGATCATCGGCGGTTCGTGTACTTTGTGA
TCTTTCGCTTCTAGGAGAAGACATCCGCCAGGTAATGTTCTCCTTGAGTT
ACCTGCCGTCGCCGGGTCAACTGACAGTTACCATCATTAAAGCACGGAAC
ATCGTACCCAAGAGCCACCTTCTTTCCCCTCCAGATTCTTACGTCAAAGT
GGCCTTGATGTGTGAGAGCAAAAAGATAGACAGGAAGAAAACGGGGGTGA
TAACTGGAACTACTGATCCGATCTTCAACGAGTCCTTCCTGTTCGATGTA
GCTGAGGTGGACATGAAAGGAGTGTTTCTCTCGCTAGTCGTACAGGTTAC
TTCTGGGACATCGCTAGGAGGCAGTGAAGTTGGCCCATGGTCAGAGCAGT
GGAACGAGATGTTAGAAAACCCCCGGAAACCTGTCACCAGTTGGTGTACC
CTAAAAGACGTGACGTCAGACACAAGAAGGGGTAGCGAAGACGTCCAGAG
CTGAATGGACAATGCTGGTCGGGCAGTTCGACGAAGAAACTCAGGGGCTT
GCCTTCAGGACGGCTTTGTACATCGCAGAGGCCGGTCGCAGTCGGAGCAG
CTGGACATGCCGGAGGAAGTGTTGAGAAGCCTCCGCCGAGGCAGAAGAAG
ATCATCGGCGGTTCGTGTACTTTGTGATCTTTCGCTTCTAGGAGAAGACA
TCCGCCAGGTAATGTTCTCCTTGAGTTACCTGCCGTCGCCGGGTCAACTG
ACAGTTACCATCATTAAAGCACGGAACATCGTACCCAAGAGCCACCTTCT
TTCCCCTCCAGATTCTTACGTCAAAGTGGCCTTGATGTGTGAGAGCAAAA
AGATAGACAGGAAGAAAACGGGGGTGATAACTGGAACTACTGATCCGATC
TTCAACGAGTCCTTCCTGTTCGATGTAGCTGAGGTGGACATGAAAGGAGT
GTTTCTCTCGCTAGTCGTACAGGTTACTTCTGGGACATCGCTAGGAGGCA
GTGAAGTTGGCCCATGGTCAGAGCAGTGGAACGAGATGTTAGAAAACCCC
CGGAAACCTGTCACCAGTTGGTGTACCCTAAAAGACGTGACGTCAGACAC
AAGAAGGGGTAGCGAAGACGTCCAGAGCTGAATGGACAATGCTGGTCGGG
CAGTTCGACGAAGAAACTCAGGGGCTTGCCTTCAGGACGGCTTTGTACAT
CGCAGAGGCCGGTCGCAGTCGGAGCAGCTGGACATGCCGGAGGAAGTGTT
GAGAAGCCTCCGCCGAGGCAGAAGAAGATCATCGGCGGTTCGTGTACTTT
GTGATCTTTCGCTTCTAGGAGAAGACATCCGCCAGGTAATGTTCTCCTTG
AGTTACCTGCCGTCGCCGGGTCAACTGACAGTTACCATCATTAAAGCACG
GAACATCGTACCCAAGAGCCACCTTCTTTCCCCTCCAGATTCTTACGTCA
AAGTGGCCTTGATGTGTGAGAGCAAAAAGATAGACAGGAAGAAAACGGGG
GTGATAACTGGAACTACTGATCCGATCTTCAACGAGTCCTTCCTGTTCGA
TGTAGCTGAGGTGGACATGAAAGGAGTGTTTCTCTCGCTAGTCGTACAGG
TTACTTCTGGGACATCGCTAGGAGGCAGTGAAGTTGGCCCATGGTCAGAG
CAGTGGAACGAGATGTTAGAAAACCCCCGGAAACCTGTCACCAGTTGGTG
TACCCTAAAAGACGTGACGTCAGACACAAGAAGGGGTAGCGAAGACGTCC
AGAGCTGAATGGACAATGCTGGTCGGGCAGTTCGACGAAGAAACTCAGGG
GCTTGCCTTCAGGACGGCTTTGTACATCGCAGAGGCCGGTCGCAGTCGGA
GCAGCTGGACATGCCGGAGGAAGTGTTGAGAAGCCTCCGCCGAGGCAGAA
GAAGATCATCGGCGGTTCGTGTACTTTGTGATCTTTCGCTTCTAGGAGAA
GACATCCGCCAGGTAATGTTCTCCTTGAGTTACCTGCCGTCGCCGGGTCA
ACTGACAGTTACCATCATTAAAGCACGGAACATCGTACCCAAGAGCCACC
TTCTTTCCCCTCCAGATTCTTACGTCAAAGTGGCCTTGATGTGTGAGAGC
AAAAAGATAGACAGGAAGAAAACGGGGGTGATAACTGGAACTACTGATCC
GATCTTCAACGAGTCCTTCCTGTTCGATGTAGCTGAGGTGGACATGAAAG
GAGTGTTTCTCTCGCTAGTCGTACAGGTTACTTCTGGGACATCGCTAGGA
GGCAGTGAAGTTGGCCCATGGTCAGAGCAGTGGAACGAGATGTTAGAAAA
CCCCCGGAAACCTGTCACCAGTTGGTGTACCCTAAAAGACGTGACGTCAG
ACACAAGAAGGGGTAGCGAAGACGTCCAGAGCTGAATGGACAATGCTGGT
CGGGCAGTTCGACGAAGAAACTCAGGGGCTTGCCTTCAGGACGGCTTTGT
ACATCGCAGAGGCCGGTCGCAGTCGGAGCAGCTGGACATGCCGGAGGAAG
TGTTGAGAAGCCTCCGCCGAGGCAGAAGAAGATCATCGGCGGTTCGTGTA
CTTTGTGATCTTTCGCTTCTAGGAGAAGACATCCGCCAGGTAATGTTCTC
CTTGAGTTACCTGCCGTCGCCGGGTCAACTGACAGTTACCATCATTAAAG
CACGGAACATCGTACCCAAGAGCCACCTTCTTTCCCCTCCAGATTCTTAC
GTCAAAGTGGCCTTGATGTGTGAGAGCAAAAAGATAGACAGGAAGAAAAC
GGGGGTGATAACTGGAACTACTGATCCGATCTTCAACGAGTCCTTCCTGT
TCGATGTAGCTGAGGTGGACATGAAAGGAGTGTTTCTCTCGCTAGTCGTA
CAGGTTACTTCTGGGACATCGCTAGGAGGCAGTGAAGTTGGCCCATGGTC
AGAGCAGTGGAACGAGATGTTAGAAAACCCCCGGAAACCTGTCACCAGTT
GGTGTACCCTAAAAGACGTGACGTCAGACACAAGAAGGGGTAGCGAAGAC
GTCCAGAGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL78011gene:BL78011Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL78011_cuf4-E1BL78011_cuf4-E1-1564476830-454790Branchiostoma lanceolatumexon
BL78011_cuf4-E2BL78011_cuf4-E2-1564476830-454788Branchiostoma lanceolatumexon
BL78011_cuf4-E3BL78011_cuf4-E3-1564476830-454786Branchiostoma lanceolatumexon
BL78011_cuf4-E4BL78011_cuf4-E4-1564476830-454784Branchiostoma lanceolatumexon
BL78011_cuf4-E5BL78011_cuf4-E5-1564476830-454781Branchiostoma lanceolatumexon
BL78011_cuf4-E6BL78011_cuf4-E6-1564476830-454779Branchiostoma lanceolatumexon
BL78011_cuf4-E7BL78011_cuf4-E7-1564476830-454777Branchiostoma lanceolatumexon
BL78011_cuf4-E8BL78011_cuf4-E8-1564476830-454775Branchiostoma lanceolatumexon
BL78011_cuf4-E9BL78011_cuf4-E9-1564476830-454773Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL78011_cuf4transcript:BL78011_cuf4-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000389genomeSc0000389:159537..174635 -
Properties
Property NameValue
Transcript idBL78011_cuf4
Biotypeprotein_coding