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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL78146_cuf0 >transcript:BL78146_cuf0-protein ID=transcript:BL78146_cuf0-protein|Name=transcript:BL78146_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=439bp
QFIYLLSSLPSPPPDFFVKYEKKIFRFLWGGGPERVSRKTIYSAYEQGGL
KLRNLRSVDLTLKASWIPKLQLNREWFCSKFLFMSCSWLRTSLFPFVQLS
VRDFDNFMGKNPPITSFFRQVIQYWLRFQLRPPEGVDEVKQQLLCLNSNI
CIGQKPFFSTAFDTGGVRFLNDILDLENRFLSYENFILKFGDVCTKLQYN
QLISAIPAHWKALLKKASHILQVCMPICRDTTWLRKKLINKHLYLFFIND
DKVCEPSYRIQLSWEELFNTPIPWRQVYCLPYKLTIDTYTRMFQFKTLFK
FLTVNKTLYTWGLVDSPLCSLCHEEEETTIHLFWNCRIVANFWAEVEGWF
FNLTKINLHMNAFNTVLGDLSDRCPVLSNLIILLGKCYIFRYRKKHVDLS
GFISFVSYFQKLEFIIAQRKNKIQKHIGKWGKLHIVLSS Run BLAST on NCBI mRNA from alignment at Sc0000039:1815206..1816680+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL78146_cuf0 ID=transcript:BL78146_cuf0|Name=transcript:BL78146_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1475bp|location=Sequence derived from alignment at Sc0000039:1815206..1816680+ (Branchiostoma lanceolatum)
CAATTTATATATTTACTTAGCTCGCTTCCGTCCCCACCGCCTGATTTTTT
TGTCAAATATGAAAAGAAAATATTTCGATTTCTATGGGGAGGTGGGCCGG
AGCGAGTTAGTAGAAAGACTATTTACAGTGCTTATGAACAGGGGGGACTG
AAGCTAAGAAACTTGCGGTCTGTCGATCTCACCCTAAAAGCCTCTTGGAT
TCCTAAGCTACAGTTAAACAGAGAATGGTTCTGTTCCAAGTTTTTATTTA
TGTCTTGTTCATGGTTACGGACTTCCTTGTTCCCCTTTGTACAACTTTCT
GTCCGTGATTTTGATAATTTTATGGGTAAGAATCCGCCAATAACTTCCTT
TTTCAGACAGGTCATACAATATTGGTTGCGCTTCCAACTCCGACCCCCAG
AGGGTGTGGACGAGGTCAAACAACAGCTTCTCTGTTTGAACTCGAATATA
TGTATTGGTCAAAAACCATTCTTTTCCACAGCTTTTGATACTGGGGGTGT
TCGATTTCTTAATGATATATTGGATTTAGAAAATAGATTTCTTTCTTATG
AAAATTTCATTCTAAAATTTGGGGATGTGTGTACAAAATTACAATACAAT
CAGTTAATTTCTGCTATACCAGCTCACTGGAAAGCATTACTAAAGAAAGC
ATCTCATATCTTACAAGTTTGCATGCCCATTTGTAGAGACACAACTTGGC
TTAGAAAAAAACTCATCAATAAACATTTGTACCTTTTTTTTATCAACGAT
GACAAGGTTTGTGAACCGTCGTATAGAATACAACTGTCTTGGGAGGAACT
TTTTAACACTCCTATCCCATGGAGACAAGTTTACTGCTTACCTTATAAGC
TCACAATTGATACTTATACAAGGATGTTTCAGTTTAAGACGCTTTTTAAA
TTCTTAACAGTAAATAAAACACTATACACCTGGGGCCTGGTAGACTCCCC
TCTATGTAGTCTGTGTCATGAAGAGGAGGAAACAACCATACATTTATTTT
GGAATTGTAGAATTGTAGCTAATTTCTGGGCTGAAGTGGAGGGTTGGTTT
TTTAACTTGACAAAGATAAATTTACATATGAATGCTTTCAATACTGTCCT
TGGTGATCTAAGCGACCGATGCCCTGTTCTGTCAAATCTTATTATTCTCT
TAGGTAAATGTTATATATTTAGATATCGTAAAAAACATGTTGATTTATCT
GGTTTTATTTCATTTGTTTCCTATTTTCAAAAATTAGAATTCATTATTGC
CCAACGCAAAAATAAGATTCAGAAACACATTGGGAAGTGGGGGAAACTAC
ATATTGTTCTATCTAGTTAATTTCCGTTATTTTCCTGTACAATGATAGGG
GTTCTCTCGGCATTTTATGATCATACTCTTTTGTTCTTGGATTTTAAGTT
TCAGTTTTGTTGTCACACATGTGCCTTTATTTTCTGTATGTTTGCCATGA
TTTTCTTTTTGTAAAATTTATGTTG Coding sequence (CDS) from alignment at Sc0000039:1815206..1816680+ >transcript:BL78146_cuf0 ID=transcript:BL78146_cuf0|Name=transcript:BL78146_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1320bp|location=Sequence derived from alignment at Sc0000039:1815206..1816680+ (Branchiostoma lanceolatum)
CAATTTATATATTTACTTAGCTCGCTTCCGTCCCCACCGCCTGATTTTTT
TGTCAAATATGAAAAGAAAATATTTCGATTTCTATGGGGAGGTGGGCCGG
AGCGAGTTAGTAGAAAGACTATTTACAGTGCTTATGAACAGGGGGGACTG
AAGCTAAGAAACTTGCGGTCTGTCGATCTCACCCTAAAAGCCTCTTGGAT
TCCTAAGCTACAGTTAAACAGAGAATGGTTCTGTTCCAAGTTTTTATTTA
TGTCTTGTTCATGGTTACGGACTTCCTTGTTCCCCTTTGTACAACTTTCT
GTCCGTGATTTTGATAATTTTATGGGTAAGAATCCGCCAATAACTTCCTT
TTTCAGACAGGTCATACAATATTGGTTGCGCTTCCAACTCCGACCCCCAG
AGGGTGTGGACGAGGTCAAACAACAGCTTCTCTGTTTGAACTCGAATATA
TGTATTGGTCAAAAACCATTCTTTTCCACAGCTTTTGATACTGGGGGTGT
TCGATTTCTTAATGATATATTGGATTTAGAAAATAGATTTCTTTCTTATG
AAAATTTCATTCTAAAATTTGGGGATGTGTGTACAAAATTACAATACAAT
CAGTTAATTTCTGCTATACCAGCTCACTGGAAAGCATTACTAAAGAAAGC
ATCTCATATCTTACAAGTTTGCATGCCCATTTGTAGAGACACAACTTGGC
TTAGAAAAAAACTCATCAATAAACATTTGTACCTTTTTTTTATCAACGAT
GACAAGGTTTGTGAACCGTCGTATAGAATACAACTGTCTTGGGAGGAACT
TTTTAACACTCCTATCCCATGGAGACAAGTTTACTGCTTACCTTATAAGC
TCACAATTGATACTTATACAAGGATGTTTCAGTTTAAGACGCTTTTTAAA
TTCTTAACAGTAAATAAAACACTATACACCTGGGGCCTGGTAGACTCCCC
TCTATGTAGTCTGTGTCATGAAGAGGAGGAAACAACCATACATTTATTTT
GGAATTGTAGAATTGTAGCTAATTTCTGGGCTGAAGTGGAGGGTTGGTTT
TTTAACTTGACAAAGATAAATTTACATATGAATGCTTTCAATACTGTCCT
TGGTGATCTAAGCGACCGATGCCCTGTTCTGTCAAATCTTATTATTCTCT
TAGGTAAATGTTATATATTTAGATATCGTAAAAAACATGTTGATTTATCT
GGTTTTATTTCATTTGTTTCCTATTTTCAAAAATTAGAATTCATTATTGC
CCAACGCAAAAATAAGATTCAGAAACACATTGGGAAGTGGGGGAAACTAC
ATATTGTTCTATCTAGTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000039 | genome | Sc0000039:1815206..1816680 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL78146_cuf0 |
| Biotype | protein_coding |
|
