transcript:BL79086_cuf1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL79086_cuf1
Unique Nametranscript:BL79086_cuf1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL79086_cuf1

>transcript:BL79086_cuf1-protein ID=transcript:BL79086_cuf1-protein|Name=transcript:BL79086_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=133bp
MVSPKSGASALEALVALCKAHGYVYAVETAGATVYNFGSLGAELRRNLQA
EWWQSMVTTQDNVFGIENAICQSSPTQDAHRPSNEAVEEAMQTGYYHCPQ
SLQHGVLSHYQSSLQLLNNKLPFGLAEMGRCFS
Run BLAST on NCBI

mRNA from alignment at Sc0000499:90758..104841-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL79086_cuf1 ID=transcript:BL79086_cuf1|Name=transcript:BL79086_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=14084bp|location=Sequence derived from alignment at Sc0000499:90758..104841- (Branchiostoma lanceolatum)
GTCTACTCTTACGTCAGGGGTCAAAGGGTAAACGGACCGTCTCATTACTG GCAGATCAGAGGGTAGGGAAGAGATTATCTCTCAATTTGTGATTTTGGCT TAACCTCCATGGTTAATTTTTACCTTTAAGCTTCAGCATGTAAATTTTAT GGATGATATCCTCTGCAGACCTTAAAATTAATGCGCGTGGGTGAAAAAAA AACATAATAATATTTTGAAGCCCCTAAAAGCTGAAGAAGAAGCTAACGTT AACGTTAACATTAACCCGTAGCAAACCATCAGTACTGGGATGAGACTGTC AGCAACTGAACACTTCAGAGGCAATTCAGCTGAAGAGCTCTACTGACAGG CCTGATCTTCTTCTTGATCTTGATTGGGTACTGGGCAACACCCCTCTTGT TGGGGTAAAGCGCCCAGGGGAGTGCGCTTTTATTGTCCTCTGAGGTGCAG GAGCACCGCCTCCTTGAACTTGGGAGGGTCAGCTATCTCCGTGACTTCTT GAGGCAATGAATTCCAGTCTCTCACAGTGCGAGGGTAATAAGAGTATTTA TAACACTCTTTGCGAAATGTTAGACTCTTATATGAGTTTTGATTTGAGTG TCGCGATTGGAGCGGCGCAGGTGACAGATAAGCTTCGACCGGTAATGTGA CTGGCAAGTTAACGTTACAGCTTGCGCTCAGGCTGATCTGATCTGGGACT GTCTTGACAGGCCTGAAATGCTACTGTCAGTAGCTGAAATTCCAACTACT ACTGTCCGTCCTCAGTTCTCCTATTCCACTACTGACAGCCATATATGATT ACGGTCAGCCTATTACAGTCTTACATCTGGCGAATCAGATACCAGTTCCT TAATTGATACCAGGCCAGGGAATTTAGAATTCAAAGAAGACAGTTACAGT TGATAAGCCCACAGTGGAAATTTAAAGATGTTACTCTGAAGCTATCCTCC AAATCTCAGATTTTGCAGCTTGGAAGAGACAGCAGTTGCCAAAAATATTA TTTGGAAGTGGGGATTATTGTACATTACGTTTTTGAGGTAAGACATTTGG CCGCATGTTGTCCTTGTAAATGTGTATACATCTCATTACAACAAATGCAG AAAAGAGCTTGTTGTACCATCATCTGAAGCAAGTACTGTATGCGATGAAA CACCTTGTGTATACAGCTCAATTAACTAGAACACCCCCCCCCCTCCATTA TTCGTATAATGTCCTTGCTAGAACAAATGCAGAAAACAGCTTGTTATTAT ACCATCATGGGCAGGAACTACACTGGGTATTCATATGCAATGAAACACCT TACACCGTCAACGTTTACAACATATTTGCCAAACAAACATGTTTATATAG CACTATAAAATGTTATCATTTCACATGGTTTGGAGGATTCAAGGAAAACT TTTGGTTCTTTACGNTTTGGTTCTTTACAGATTAACTGTCTTTTGTCCAG GATTAGGTCATAAGACCCATCAGTGCCATGGTATCTCCTAAGTCAGGAGC ATCAGCGTTGGAGGCACTTGTAGCGCTGTGTAAGGCCCATGGATATGTGT ATGCTGTAGAAACAGCAGGGGCAACAGTGTACAACTTTGGGTCATTGGGA GCAGAGTTGAGACGAAACCTACAGGCAGAATGGTCAGTGCTTTAAATCTT TCCTCAGAGTACCACCTTGCTTCACACTTCTCAATCTTACATCTAACGTT GGGTAACATAAATTCGCCATNTAAATTCGGGATTTTTCCGATAATGGTTG ACTGAAATCAATCTAGCAGAACAATAAACCATCCTTTTTTTCTATTATTC TGTCAGTATCATGCATTATCTTTGCACAAANTATATATGGTAGATTTTGT CTCTAGTCGTGCTGACACCATAATATTTCAACTTGAAACTACCGTCCGCC GCACGCAGAATGACGGTGTTGTCGGACAGGTGTGAACATTATTTTGGGAG AGAAGATTCGTTNATATCTTACCGCTAATCACATTTTATACAGCAGCTAT TCGTTCCATCCTTGGCTTGAGGAGAGTGCTATGGATATAGACGTGTCCAA GAAAAAAAAATACACGAAAAAACGGCCGTACTGCACACATCAGGCCTTAG GTAACAACCCGTTTGTTGAGTCGGTAGAACGTCACTCAAAGTCGATCCCC ACCGTCATGGCAACGTGTACATTATTCATGGGAAGTTAGCTGGCTGCCGT AGCAATATGGTTATACTACTAGTATGTCCATGTGTTCCTTGTTGTGTTAG GAGCATACTTTGAGGAAAATATCGTCTTCAGTCCACTATCACACGCAACA TTTAGACAAAAAAGTGTTCCTCACAAACCTTTGTCGTCTGCTTGACGACA GGATTCTGGGTAATAATATGGCGGCGGGAAAATACACGTGCCGTAGGTTG TAGCAACAAAGAGGAGTTTTGATGATTGATCACACTTAGAATCCAGTTGC AGGTTAGCAAAAGAGATTGTAATAAGTTGTCTTATAAATAATTGTGTTTA GCAGGCAGGAGATGTGACATTTGTCTTATAAACCAGCGAACAAACGTGCA GTGTCATTCTCCCACGAAGCCCCCAGACTCTGTCAATAAGGGACAGAGAG TTTTTGACATCACCAACTTCTATTATGCATTTATCGAAGCTTTTCAGCCA GTGTTCTGAATACGTTAGTCTATCCGGTTTGCATTGCTGGCGTTATAACT GATTTTGCATCTAGCACATATCCCTAAAATACACCGTTTCAAAAAATGGG GAATTTAAGTACCCCGCGAGTTTATGTTACCCAACGTTAACTGTGTAAAA ATGATTCTGAAGCTGTAATTGTTCCTCTGTTTGTAGTTAGATGTCCACTA TTGGCTTTATTAAGGCTTTTAAGTCATTGTTAGGCCACAGCAATTTAAGT TATTGCTTCTCGGTTGCCTGTCCTGTTTTTCATTTTGAAAAAAAAATGCC TTGCTGTAAATCCCATTCACAAATTTTTAGTTGCAGAACTCAATAGCCAC CATAATAGATTATAAAGGCCTGCAAATACCTAAAAAGTGTGGTCAATTGA TCTTAAGTTATGATTTTCATTTATTCAAACTTGTTCTCAATATCAATCCA TATATTACATGGCAAAAGGTAATTTTGTTACTTTTATTATTATATATTGC TACATGTAGATCAAAGAAAGGGGTGCATTGCATAAAATGAGCCATACAAA GCTGAAACTTGAATAATCCTCTTATTATCACCATGAAAAATGGAGATATT GTTTTTGGCGTGTCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG TGTATCTGTATTTCCAGGGTATTGAAGCCAGCATAACTAAGATCTCTGGA TGGATTACAATGATATTTGGTATGGATGTAGGTGTTGGGGAGACCAAGGA GGTTAAATTTAGCTTCCTTGGGGACACAAAGGTCAAGGTTGATTTTGGCC CCCCTAGTATTTGACCTTGGTACTGCATCAGAACTTCGGAATCCGTTTTT TCTATCTTTTGACCGACGTGCTATGGTCTTGATGTTTTGGGTGGCAGGTA GCTTGTGATGAAGTGATGTAGGCTTGGGCCCCCTATCAGCTTATGCTCTG GAACTGCAGGGGCAAATTAGGACTTTTGTATAATCAATGTTGGTGTGTTA CGCCGAAGGGCGGTTATACCGGCTATACAGATACAGATACAGATACAGAA TGAGGAAAATCTACATTTGCAGTCATTTCCTTTATAGGACTTGAATACAT GTAACATAATGTAGTTTACGGCATGTAGAACATAAACAGATACCGGTTAT GCAAATACATCCCTAATTTGCATAATTAATGCAAAAGTGTCATAATTCTT CTAAGTGGTAAATGATTGGATTGTTAACATTGTGACCTGTAGATAGATTA TGCACATGTGGAGGTCATTTGCATAATCAAAATATTTCATGGAGATATGA GGTCTCCAAACTCTTGTTCTTTATGTTATGTAAACCCTTAAAAAAGACGT GAAACACAACATGAATTGTGGAAAACCTAAACACAACCTATAGTTCAAGC TATTTTCATAATCTATGACATTGTATCGTCAGACAACTACTTGGTCAGTA TACATGTACATGTAATGGTGCATAAAATGAAAAGTTCACAGTTTCAAAAT TCAAAATTAACCATTCACTCATGGCCGATTACTTAGCTGTGATTTATTTG TATCATTATGAACATTATTCTATTCATAACAAGAACATGAAAAAAAATAC ATTGCCATGGTGACGGTAGTTGTTGTAACAGTTGTTGTTTTCCTTTTTAC CATACCCTGCTTTATATAACAGGGCACTGATAGGAGGTGCTGTTCATACG GGATTTCCAACGAAAAGGGCTGATGAATAACTGTTCTGTTGGACAAATAC AGGCACATACACATACACACACACATGCACAAACAAACAAACTAACACAC ACACAGACAACGACAGCACAACCGTTAACTACATTCTATCATGCATTAAG TCCCACCACCAGAATCATCATCATCATATCTTGTCGCTCCACTGCTGTTA ATCCACTGACGGGCAGTCTGGTTGGCCTCTCGTAGATCGTCATCATAGAC AACTAGAAACAACACTCGGTGCTCACTGCTTGGGTTCCCACCACAACAAT GACCATTCTACTCTGACAGGACTGCTGTTTACACCAATGCCACATTAGCC AAAATCTACCATTATTACAAATTTATCATCATACTTATCCACTTACCAAC AGACACAGCACACACAATGCAACAGCATCCTTCGAACACTAAATATGTCT CATGCCCCATAGACATCTAGCCTGAGTGCCAGCCTTTTTAGCTTCCGTAC GCTACGCCAAAAAGCAAGGAGCGGAGCTTGGGTAGCATACGGAAGCTAAA AAGGCTGGCACTCAGGCTAATAGACATCAGGAAGGTGAATAAGCATGATG TTACTACATGTAACGTAACATAACCAATTAACGTCCGATTTATTCAAAAC GTATTTATCTTAAAACGGCGCGGACAGAGCCAAATTTAAAATCCATGGGC AGAAATATCAGCTCTTCTAAAAAGAAAATGCATGGTCTGTAAGTTTTTCT CCGCCTGTTTAACGCCTTGCGAGCATGTATTTGTTCTGAGGTATATGATG AAGAATTGTGCTAGGGTAACCCATTATCGTCCACGTCTGAATCTTTTCCC GTCTAGCGCTATACTTGAAGAACATAGACCAGAAAAAAAAGCACAGTAAC TGTCCAAAGTAGTCTGCAGACAAATTATAGTAAAATCGCTATGTCTGTCC GGCCACTTGCTTAACGCGATGGAAAAAACCAATGTTTATCTGTAAATTTC CCCCACATGCGCGGCACGTGGCGTTCACGTGGTAAACGCATGGCCATTAT GTTTTGCTGTGCAAAAATTAAAGAGATGGCTAAGGATCATACTTATGATG TTCTTTATTGCTCATGAGAACAGGCTTTGGCATAATACACCGCGACATGT GGACATGAGCCAAACCGGACGTAAATAGGTTCTGCACGTAAATAGGTCAT GTTACGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNAGAAACATACGATCCGTACGGAATACATACGATC CATTACGCAGAATACATATAGTTACGATCCGTACTAATTTGCTGGCCATC GCGCTAGCACCGAATCTAGCTTTGTCTGGTCTTCCTAGTTGGTCTAAGCC TACATCAGTCTTAATTTAGTGCAGCTTGAGATATTTAGAGTTTATCCGGA TGGGATACGCCATTATTAAGCTCTTATAGCCAAGATATCGTACGAAGAAC TGGTTATCCCGAGTCCGCCATATTGAATTTGCCGCCGATGTCACGTGATC AGGACATTTCTCCAAATTAGTACGGATCGTATGTATTCCGCGTAATGGAT CGTATGTATTCCGTACGGATCGTATGTTTCTGCGTAATGGATCGTATGTA TTCCGTACGGATCGTATGTTTCTAGTAATGGATCGTATGTATTCCGTAAA ATTCGTATGTATTCCGTAAAATTCGTATGTATTCTTTGGCACCCCTGTTA TACGTAGTAGCTTAGGAATTCGTGGCCTTTAATGGAGTGCCAGGAACTTC CAGCCGACTAACATTCAAAACACTCTAGGACCTATGATCTAAAAATAGCT GCATGACACACATTCTATCTTTTGCATTCCTGGGGTACCCCTTACCTACA TATTAATGGAATACCAGAAGGGTCATGGATGACCCAAATTCCACCATTCC AGGAACTGAGGTCATGGGGGGCTAATATCCAAACATACCAGACTACCCAA GGGAACCTGAATGACAAAACCAGCTCCTGGGGACAGACATCCAAACATAC CAGAGATGTTGTTTTAATTTTTACTGCACCCTGCTTAGGGCACTGATAGG TGGTGCTGTTAATACAGGATTTTCAACGAAAAGGGCTGATGATTACCTGT TCTGCCACAAATACAAACACACTCACAGACCTAGGGCCTCCCTAAAAACC AGTGCCAAGCCACTGAGGGAGCTACCATAATAAAAGAATACAGAAATAAA TAATTGGATCTGAGGGGTCATGTATACATGATACATAAACCTGACACATA TGGTCCACAGATGTGGTTGCCTTTGTAGGTTTTCTGTCCCCAGGGGGGCT ACATGGCTTTTTATATGTACTCAGCTGACTAACATTCCAAACATTCTATT GGCTTAAATGCCTGTGGACAAATGCCTGTGCAATTCCTAGAATATTTGCA AACTGCACAAAATACTACCATTTGGCTTGCCACTGAGGCATCGCCAAAAA CATGTATTTGTGTGCGAAATATATGATGATCAGATATGATACCAGTGTTT GATCACACATGTTTATTGAATCAAATCACTTTCTATTACTAGTTATTACT GTACATATTCTTGCAGAGGGAAATGCATGGCTTTGGTGTAACCATTTCTT ACTGATTTTACTTTATCACAGGTGGCAGAGTATGGTCACAACACAGGACA ATGTGTTTGGGATAGAAAATGCCATTTGTCAAAGTTCACCTACTCAGGAT GCACATAGGTATGACAGGTTAACTATCATTCTTTAACCCTTGCTGTCATT ACTACATACATTATGTCTTCATCCATGACTTTTGAAATTCCACTTCCACT CTCTCTAGAAGGCAACATACCATTGTTGTTTCTACATGAATGTGCAATGT TTCTGTAGGCAATTGTGTTTCTGATGTGTTGCTGATAATGGAGTCTTCAC AGAAGGTCACAGAACACCACTAGTCACAAAATACATGTAAATAGAGTAAC TGTTTAAATTCATAAATTTGACACAAATCAAGGGAGCGAGTAAAAACAAG TGATCCCAATCGAGATTCGAACCCACGCCGAAACCGGCAGCCCTCTGGTC ACAGGCATGCACGCCTTAACCACTAGGCTAAAAGGTCGCGACCAGTTAGA CTGGTCAGTTGGAGGCGCTTGACGCTTGAACCCCCACTGTTACAAATTCT CTAATTTAGTCTAAAGAGTCAGAGTCGGAGATTTCATATTGCATCCACTA GTACAAGTGTTAATTTTGATCAGTGACAGTCAGTGTTGTGTACCTCTATC AGTAAAGTTATTAAGGTATATACAGTCATGTAGGTCCTCTGATTTATCAT TATTTCAGTTATAATGATCAATCAATCAATCAATCAATAACCTATTGATA TTATATAGGTAATAGTATGATATCACTTTTTATCTGTAATTCAATCCATG CACACTTGCCAAATGAATACTGTAATTCTTATTTCTTTCACTATAACTTT ATGTTCACTGTTTTCATGGTTATCTCTGTACCGTGAACTTATCATAACCG CGAAAAAAACTTGTTATTATCATTTATTATTCCTTCACACATCCCATCTG TAAATCACTTGCCACCATCATGAAGTTAAAATTCAGTGAAAATGTCTATT TTCCTTACACCGTGAAATTTTGCTACCGTGAAGATAAAGTGAATTACTAG TACATAATGATCTTAGAAAATGAATGTTCATAGCTATTTTTAACAACTGT GTTGATGCAGGCCGTCTAATGAAGCAGTGGAAGAGGCCATGCAGACTGGA TACTACCATTGCCCCCAGTCTCTCCAACATGGTATGTGTATGTCCATACC TGGAACTGTTTAGTAAGCATCTGGTTATGCAGTAGATTACCTGTACCAGA CCCACAATCCAACAGTGTCTTTTGGTTGACTGAAAGGGAATCTGATAGAA AATAATTTGTGCAGGTAAAATTTGTCCGTGCAGGTAATTCTGAACGTCAC CTGCATCTGTACAGGTTTGCAACATGTTATCGGGCTGATTAATGATGGCC ATGACTATCAATGGGCCCAGATGGATACCTTAAGGAACACAAACAAAAAG GATTCTCAATACAGTATGATATATAACTGTGTCCAACATGCCATAATGAT ATTGAGAATGAATTTCACTTCATTATGGATTGTCCAACTTATGCTGATGA CCGACAAAAATTATTACAATCTATTGTTTGCACGTCCGACATAATATTAC CGCCTACCAGGACAGAGATATTCAATATGTTATTATCATGCCCTGTTCAT ATATCCATCCATGTAGGCAAATTTGTATATAACTCTGTGCAAAAACGAGA CAATATCATACATTCCTGACACAGCATAGGAGTGTCCCTGTGGTGTAATG GTCTGCGCTTCTAGTTTTAACTTGCCACATCTGGTTCAAATTACTTGGAC CAGAAGGCCCCAGTTCAAGCCCCGGGTTAGGACACTTCTGGACAAGAGGC ACATTGAGTCATACCGAAGACTTTATAAAAATGGTACATACTTCNGGTAG GACACCTCTGGACAAGAGGCGCATTGAGTCATACCAAAGACTTTATAAAA ATGGTACATACTTCTGAAACAGTATGGAAGTTAAACACACTCCACTGCCA GTGGACTAGCCCCCTGCTGCAGTGATTGCATCACAGTGTGGCCCAGGGCT ATGAAACGGGGATGGGCACCGCCCTATACATCAATTATGGTGTGGGAGAA TTTTAACTAACTAACTGACACAGCGTACTGTTACTAGTGTTAGCAGCATT CTGCATTCTAGAGCGTTATAAAGCATGTACATTATTCTATTGATTATTTT TGATGTTTAAATAGATTATAAGATTAGATTTAGTTATTATATTTATCAAC AATTAGCAATAGTTCAACTCTCATGTGCGTACGTTGCCATACATTGTATC AGTTACAATTGTCGCGCAATAAAGTTCTTCGGTCTATAAATTAGTGCCTG TTGGAAGACTGCGCTCCTGTGTACAATAACCATCACTGTCATTATGACTC ACCCTTTGCCCATGTGTTAATATAACTTTTGGGTGGCAGATAGCTTGTGA TGTAATAAAGAAGTGGCGTAGGTTTGGGCCCCCTAGCAGCTTGCTCTGGA ACTGCAGTGGCGTTATTGTGAAAATCTTCTAAGGAGAATAACTGAACAAA GGGACAACGGATTTCCATGATATTTAGTATGCAGATAGCTTAGACAGAGA TATACACAATGATGTGCAAATTACGCTAATCGACACTTAATTTGCATAAC TAGTGAGGAAAATCCACATTTGCAGTGTTTTCCATTATAAGACTAATACA TGTTACATATGTAGTTTATGGCAAGTGGAGCATCAGCAGATACCAATTAT GCAAATAAATTCCTAATTTGCATCATTAATGCAAAAGTGCCAGAATTCAT CCAAGTGGAAAATGATAGGACTGACAATATTGCATCATGTCTAAGTTAGA TAAAGGTGTTTATGACCAAGCATATATTATGTAAATATGTAAGTCATTTG CATAAACAGAATAGTTCATTGAGATATGAGGTCGCGGAACTCTTGTTTGG AACTGATTTTATTTCTAAATTAAAACTTTGAAAGAGAATAACTCAAGGAG GGGTTGACGGATAGTCATGATTTAACGCAATGTAGATAGCTTTAACGCAA ACCCGAACTATACAAGGTTCCGGGTCAGAGTTCAAATCTGACCAGGGTTA GGGTCATGACATGGTAATCTGCCAGAAGTGAGTGGTCGTCACCCTGATTT CTGCCCCCTATTGCTTGCTGATCGTTTTAGCTGTGCATCTATTTTTTGCA TCTCCTGAAAAGCCTGTGAGTTGTAGTATTTTTGGACGTGGTGAAGTTGG TTCGCCATTGAAGCCTTTTTGGTATTAGTCTGCGGCAACGGTGATGCATT TTTTTCGCCTGATGACCCAAATAGCAGCGTTTTTATAGCATTTTCACCGA TTTTGCGTAATCGGAGATTGTGAAAGTTATAAACACCTTTTACTAAGCTT TCTCAGCATATATGCCGTGACCCCAAGAAACCCGTTTTTTCCAAGCAGGT TCAATAAAAAAAGTGTAAGAAAATGATAATATTTGGGACGAAAATTTACA TTTTACTATGGTTTCTACCCAAAATTAAGAGACAACGAACGATACCGATA AATACATCAGAAAGCAGCAGAAAACCGTTTGTTTGCCGATATGATTACAT TTTCTGTCCTACTTTTCTTGGCAGAATTATAGCCTGTTGGCCTGAGGGTG TCGGCCTGCATACGAAATCGTAAAAAACTCTGGTCCGTGATGATTTCCAT GATTCTGCATCTATTATGCAAATCAGATGCTCATTTGTATAATTGAGCAG AAGGTCTATAGATTTGCTGCATTCCATTATAGGACTCTCAAACGCATGAG ATATTTTACTGAGAAAAATATAAATATCTCTAGATATCAATTATGAGATG TAAAAAATGAAAACGCTAACAGAGATGTAAAAAATGAAAACACTAACAGA GACCACCGTCGCCGTGGCAATTGTTTTTTTCATTACCAATCTTGTTACCT GCACCATAGGCGTACGGTTATTGCCTTCGCCGTAGGCAGAACGTTATATT TTTGGTCGGGATTTGTGGAGTGATGGTGTTGGCAATATAACTCTTGATGC CATGGATGGATGTTTGTGATTTTTGGTAGGTAAGTTTCTGTTGGGGAGAC CATTCAGTCAGGTTCGAAGATGGGCCTTCTGGCGGGTTTCTTCAGTGCTG CAGTGGACCTTTTGTGTTTGTTGGTTTGATTGTTGATGGTATAACTTAAT AGACAATGGATGGATTGTGATGAAATTTAGTAGGTTGGTGGGGATCAAGA AAATGAAGGTTAAGTTCAATAATAGCCTCCTAGTGGCTACATATGGCACT GCAGCGGGACTTGGCAAAGTTTTTGAGTTCAAGTTCTGGATGTGCTAGGG TCAGGATTTTTGAGTGGTGGATAGCTCTTGGGGCAGGAGGAAGTTGTTTA AGTTTGGCTTCCCTAGTATGGAACTACAGTGGGCATTTTTGCCTAAACGT TGGAGGATGATTCACGCAGGGTTTGGTGGGTTTTCATTGTTTGGGGCAGG TAGGAACCTTTGGTGATGATGAACATAATGTGAGGCATTTAATGCAAATT AGGGACTTATTTAAGCAATTAAGGCCATACCAATTAATTTTGTTGCTTCT CATGATCAGAATAGCCACTCCTGTTTTTCCCATTTTGGAAAAAAAACAAT TGAACTGGGGCACTATTCCCAATTTTACTATTTGTTCAGTTGTAAAACTC AATAGCCACTAAAATAGATTATAGATTATAGATAATTTATTAAAACTATT GCTCAATATCAATCCATATATTACATGGCAAAAGATAATTTTGTTGCTGA AATTAAAGTACTAGATCAAAGAAAGGGGTGCATTGCATAAAATGAGCCAT AGAAAGCTTTCATCAAGACCTACCAACATACCAAATACCAAGACAATCCA TCCAAGAATTCTCGACTTATCGCGTTCACTAACACTGTAACAGACACACA GACACGTTCTGTAAAATGTAACCTTCTCGGTGAAGGTNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTTCGCCCAAAATCTAATCAACTTGAGATTTCCCACA TACACACCGACACACCAAATACGACAACAAACCATCCAGGCGTTCTCGAC TTATCGTGTTCACTAACAGACACACAGACAAGCATAAAAAAATAACCTTC TTGACGAAGGTAATTACCACTCACTTCTGTATTTAAAATGCCTCCTGTTC CGGTCTACTGTGAATGTTACAATGTTCCTTATATTTTGCTATCTACTAGT ACTTGTATTTCATTTCATAATGTTGCATATGTTGTTTTAGTTCGTTCCAT TTCGTTCCATTTCGCACTTTCTGGGGACTGCGCCTTGGGCAGGTTTGACT TGGGCAAGTTGGTCCTAACATGCCTACCGTATTTTCTCGATTAAAGTGCG CACCCCAATTAAAGTACGCACCCGTGATTTGGGGATGGTTCCAGACAAAT TTGCAGAACTGAAAGGTAAAGTCAAAAACCCCAAATAAAGTACGCACCCC TTGTCCACTGATCTTGAACACATTTTGAACAGGAGAAATTCAAATCTATG GTGTTCCTTCTATTATCTCCAGGTCATTTTTCTTATATCAAGGACTACTA CATTATGCCATTCCTTAGATTCATAAAAGATTCTCTTGTTAACTCTGCCA GCATCGTCTCTGCAAACTTACGACAAGTTACAAATTGGCAGGTATTGAGC CATGTATTGTTTCACCGCAGCTGGGTTCCTGGTTTGATTAAGCAAGGGTT TGAGTTTGAGGTCCTTTTCCAATTTGTCCTGGCAATAACCTGAAATAAAG TACGCACCCTGACTTTAGCAATGATTTGTGGTGCCTTTTGAATTTTGAAA TGTTTAAAAAGTGCGTACTTTATTCGAGACAATACGGTAATTCCTTGTCT CTACCAGACTAACTNTGTCTATTTTTCCGCTAGACATTGTCACTTGGTGC GGTAAATGTCCCTCTTTCGGTGACATTTCCCCAGTTTGGCCTGCACCTCC TCTCTCCCCCAGATTGCGATGAGGACCCTGGTCTCCTCATCGCGCCACCA GCCACCAGCTGAAGTTACTGACCGGAGTTTAATCANATAAGAGGGCCTGG TGGAGGCTACCTAATTCCATGCTTGATATGTTCTGTGTTGTGCCAGGTGT CCTGTCCCACTACCAGTCCAGTCTACAGCTGCTGAATAACAAGCTTCCCT TTGGCCTGGCAGAGATGGGCAGGTGTTTTTCNCG

Coding sequence (CDS) from alignment at Sc0000499:90758..104841-

>transcript:BL79086_cuf1 ID=transcript:BL79086_cuf1|Name=transcript:BL79086_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1596bp|location=Sequence derived from alignment at Sc0000499:90758..104841- (Branchiostoma lanceolatum)
ATGGTATCTCCTAAGTCAGGAGCATCAGCGTTGGAGGCACTTGTAGCGCT
GTGTAAGGCCCATGGATATGTGTATGCTGTAGAAACAGCAGGGGCAACAG
TGTACAACTTTGGGTCATTGGGAGCAGAGTTGAGACGAAACCTACAGGCA
GAATGGTGGCAGAGTATGGTCACAACACAGGACAATGTGTTTGGGATAGA
AAATGCCATTTGTCAAAGTTCACCTACTCAGGATGCACATAGGCCGTCTA
ATGAAGCAGTGGAAGAGGCCATGCAGACTGGATACTACCATTGCCCCCAG
TCTCTCCAACATGGTGTCCTGTCCCACTACCAGTCCAGTCTACAGCTGCT
GAATAACAAGCTTCCCTTTGGCCTGGCAGAGATGGGCAGGTGTTTTTCNA
TGGTATCTCCTAAGTCAGGAGCATCAGCGTTGGAGGCACTTGTAGCGCTG
TGTAAGGCCCATGGATATGTGTATGCTGTAGAAACAGCAGGGGCAACAGT
GTACAACTTTGGGTCATTGGGAGCAGAGTTGAGACGAAACCTACAGGCAG
AATGGTGGCAGAGTATGGTCACAACACAGGACAATGTGTTTGGGATAGAA
AATGCCATTTGTCAAAGTTCACCTACTCAGGATGCACATAGGCCGTCTAA
TGAAGCAGTGGAAGAGGCCATGCAGACTGGATACTACCATTGCCCCCAGT
CTCTCCAACATGGTGTCCTGTCCCACTACCAGTCCAGTCTACAGCTGCTG
AATAACAAGCTTCCCTTTGGCCTGGCAGAGATGGGCAGGTGTTTTTCNAT
GGTATCTCCTAAGTCAGGAGCATCAGCGTTGGAGGCACTTGTAGCGCTGT
GTAAGGCCCATGGATATGTGTATGCTGTAGAAACAGCAGGGGCAACAGTG
TACAACTTTGGGTCATTGGGAGCAGAGTTGAGACGAAACCTACAGGCAGA
ATGGTGGCAGAGTATGGTCACAACACAGGACAATGTGTTTGGGATAGAAA
ATGCCATTTGTCAAAGTTCACCTACTCAGGATGCACATAGGCCGTCTAAT
GAAGCAGTGGAAGAGGCCATGCAGACTGGATACTACCATTGCCCCCAGTC
TCTCCAACATGGTGTCCTGTCCCACTACCAGTCCAGTCTACAGCTGCTGA
ATAACAAGCTTCCCTTTGGCCTGGCAGAGATGGGCAGGTGTTTTTCNATG
GTATCTCCTAAGTCAGGAGCATCAGCGTTGGAGGCACTTGTAGCGCTGTG
TAAGGCCCATGGATATGTGTATGCTGTAGAAACAGCAGGGGCAACAGTGT
ACAACTTTGGGTCATTGGGAGCAGAGTTGAGACGAAACCTACAGGCAGAA
TGGTGGCAGAGTATGGTCACAACACAGGACAATGTGTTTGGGATAGAAAA
TGCCATTTGTCAAAGTTCACCTACTCAGGATGCACATAGGCCGTCTAATG
AAGCAGTGGAAGAGGCCATGCAGACTGGATACTACCATTGCCCCCAGTCT
CTCCAACATGGTGTCCTGTCCCACTACCAGTCCAGTCTACAGCTGCTGAA
TAACAAGCTTCCCTTTGGCCTGGCAGAGATGGGCAGGTGTTTTTCN
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL79086gene:BL79086Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL79086_cuf1transcript:BL79086_cuf1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL79086_cuf1-E1BL79086_cuf1-E1-1564476830-474727Branchiostoma lanceolatumexon
BL79086_cuf1-E2BL79086_cuf1-E2-1564476830-474725Branchiostoma lanceolatumexon
BL79086_cuf1-E3BL79086_cuf1-E3-1564476830-474722Branchiostoma lanceolatumexon
BL79086_cuf1-E4BL79086_cuf1-E4-1564476830-474720Branchiostoma lanceolatumexon
BL79086_cuf1-E5BL79086_cuf1-E5-1564476830-474718Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000499genomeSc0000499:90758..104841 -
Properties
Property NameValue
Transcript idBL79086_cuf1
Biotypeprotein_coding