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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79118_cuf0 >transcript:BL79118_cuf0-protein ID=transcript:BL79118_cuf0-protein|Name=transcript:BL79118_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=357bp
MALFRDLQSIRLRQEVALLLNMDQPISGHDYRLLAELLGYEYTFIRAFGA
TSNPTLRLLEDWETKRDATVKKLCDSLEEMERYDVLQLIQDHVKQAEPGK
TLVVQETGRAPSEPVTSHVGFAITKTDVGSSVTTSTSLDSVGSVSSVPSG
SLTTVRTFICTVMRIPPDRGLLSAVSTSITNFQLLLAAILLVNDVMYGFG
ANIRGFYLSEHVMIFLPLWQFFYCEPRVKTNCELSRIITEKTLQAKDTCD
GFEDEKLQKLKALRSRIAYSLRTAILGTLTIELLFITFVLARWHSEIRSD
FFGAVFITFVSDTAFNCWLYFRHYHSIKTEKLDRRFVFYDLMMLVNFSNS
SLLPSPL Run BLAST on NCBI mRNA from alignment at Sc0000004:3060151..3062311- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79118_cuf0 ID=transcript:BL79118_cuf0|Name=transcript:BL79118_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2161bp|location=Sequence derived from alignment at Sc0000004:3060151..3062311- (Branchiostoma lanceolatum)
AAGGGAAATTATGTTTATTCAAAGGCCTCTTCTGGAAAGAACTATGCTTA
CGCGTAATTACATCCGTAAACGTATCTGTTCCCTGACCAACTTCCGAGTA
ACGGTAGGGCACAGAGTGGACCAACCACTACACCGACTTCCGGTCATGAC
GTCAGAGATTATCTTCCCGTTTAGACAGGACTCGACGGTGTTCATTGAGC
AGATCCAGTAAATCAGATCCAGACACAGGTTGTAGCGACAGCTTGGGAGA
CAGTTGGCCGACCTTTTGGAGACAATTTGGATGTCAGCCTTGTTGTTGGA
TCGCCGCCTGGAGTGAGGAGAAACGTTGGGGGAGAGTTCAGCAGTGCGAC
CTGTCCTGTTTACGGCAACCAACATGGCGCTCTTCAGGGACCTGCAGTCT
ATTCGTCTTCGCCAGGAGGTGGCGTTATTATTGAATATGGACCAGCCCAT
CTCAGGACACGACTACCGTTTGCTAGCGGAACTACTAGGGTACGAATATA
CCTTTATTCGGGCTTTTGGAGCAACCAGTAACCCCACCTTACGTCTGCTT
GAAGACTGGGAGACTAAAAGAGACGCAACCGTGAAGAAACTATGCGACTC
TCTAGAAGAAATGGAAAGATATGACGTACTACAATTAATACAGGACCATG
TTAAACAAGCAGAGCCCGGGAAAACACTCGTGGTTCAGGAAACGGGTAGA
GCCCCTTCCGAGCCTGTGACGTCACATGTTGGTTTCGCAATCACGAAGAC
GGATGTCGGGTCAAGTGTCACTACTTCAACCTCGCTGGATTCGGTTGGCT
CCGTGTCAAGCGTCCCTTCCGGCTCGTTAACGACTGTCAGGACTTTTATA
TGCACAGTTATGAGAATTCCGCCCGACAGAGGACTTTTATCCGCCGTGTC
AACCAGCATCACAAACTTTCAGCTACTGCTGGCCGCCATTTTGTTGGTCA
ATGACGTCATGTACGGGTTTGGCGCCAACATCCGGGGATTTTACTTGTCG
GAACACGTCATGATTTTCCTACCGCTCTGGCAGTTTTTCTACTGCGAACC
GCGAGTCAAAACAAACTGCGAGCTGAGCAGAATCATCACAGAAAAGACAC
TACAAGCTAAGGACACATGTGATGGTTTTGAAGATGAAAAACTGCAAAAA
TTGAAAGCACTGCGATCCAGAATAGCGTACAGTTTGCGAACCGCCATTTT
GGGAACTTTGACGATTGAGTTGCTGTTCATAACGTTTGTACTTGCAAGAT
GGCACTCTGAAATTAGGTCGGACTTTTTCGGCGCGGTCTTTATAACGTTC
GTGTCTGACACTGCGTTCAACTGCTGGCTATACTTTCGCCATTACCATTC
TATTAAGACAGAAAAACTGGACAGACGTTTTGTGTTTTACGATTTAATGA
TGCTTGTCAACTTTTCAAACTCTTCACTGTTGCCCTCGCCATTATGACAA
ACAATATCTTTTAACTGATTTGGATATTTATATACTGCTGCATCTTCTTG
TGAAGTTACATTGATAATCATTTATACATGATCCGACGATTTGAATGTCA
TATATCCCAGAAATGTTATCATTGCTGTTAGCTGTTATAGAAATTGCTTC
AGAAACTTCAAATTTGCATTTTTCTGGAAAAAAGATTATGAGAGCCATGC
TCTGTAGAATAGCGCCACCTATCAGACGTCGCAGTCAAGACAGGAGGTTT
GATCATATTCAGCAAAGGAAGATAAATATTGAAACGGCAACTAGTATTTT
TGTTGTATGTGTACTTTATACAGCTTTGTATGTTTAATGTTCAAAAGCTT
TACTTTCATGTTGTCTTCCTTTAGTCATTTTATCGTCGGTTTTACACTTT
ATGTCCACTCGATATTTGTAATCGGGGTTTGCAGGTTGATATTGTGGTCT
GCTACCATAAATAATGACAAGGCAGCTAACTTTTTTTTCGGATGTGTACT
TTGTACAACTTTGTGATTTTGACTGATCAAAGCTCTACTTTCATCGTCGG
TTGAAACGTTTTATCGTCGGTTTTACACTTTATGTCCGCTCGATATTTGT
AATCGGAGTTCGCTGGTTGATACTATGTTCTGTGACTATTGCACGGCAGA
TATTGACATTGTGTACTTTGTACAACTTTGTGGTTTGAAATGATCAAAGG
CTGAACTTTCA Coding sequence (CDS) from alignment at Sc0000004:3060151..3062311- >transcript:BL79118_cuf0 ID=transcript:BL79118_cuf0|Name=transcript:BL79118_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1074bp|location=Sequence derived from alignment at Sc0000004:3060151..3062311- (Branchiostoma lanceolatum)
ATGGCGCTCTTCAGGGACCTGCAGTCTATTCGTCTTCGCCAGGAGGTGGC
GTTATTATTGAATATGGACCAGCCCATCTCAGGACACGACTACCGTTTGC
TAGCGGAACTACTAGGGTACGAATATACCTTTATTCGGGCTTTTGGAGCA
ACCAGTAACCCCACCTTACGTCTGCTTGAAGACTGGGAGACTAAAAGAGA
CGCAACCGTGAAGAAACTATGCGACTCTCTAGAAGAAATGGAAAGATATG
ACGTACTACAATTAATACAGGACCATGTTAAACAAGCAGAGCCCGGGAAA
ACACTCGTGGTTCAGGAAACGGGTAGAGCCCCTTCCGAGCCTGTGACGTC
ACATGTTGGTTTCGCAATCACGAAGACGGATGTCGGGTCAAGTGTCACTA
CTTCAACCTCGCTGGATTCGGTTGGCTCCGTGTCAAGCGTCCCTTCCGGC
TCGTTAACGACTGTCAGGACTTTTATATGCACAGTTATGAGAATTCCGCC
CGACAGAGGACTTTTATCCGCCGTGTCAACCAGCATCACAAACTTTCAGC
TACTGCTGGCCGCCATTTTGTTGGTCAATGACGTCATGTACGGGTTTGGC
GCCAACATCCGGGGATTTTACTTGTCGGAACACGTCATGATTTTCCTACC
GCTCTGGCAGTTTTTCTACTGCGAACCGCGAGTCAAAACAAACTGCGAGC
TGAGCAGAATCATCACAGAAAAGACACTACAAGCTAAGGACACATGTGAT
GGTTTTGAAGATGAAAAACTGCAAAAATTGAAAGCACTGCGATCCAGAAT
AGCGTACAGTTTGCGAACCGCCATTTTGGGAACTTTGACGATTGAGTTGC
TGTTCATAACGTTTGTACTTGCAAGATGGCACTCTGAAATTAGGTCGGAC
TTTTTCGGCGCGGTCTTTATAACGTTCGTGTCTGACACTGCGTTCAACTG
CTGGCTATACTTTCGCCATTACCATTCTATTAAGACAGAAAAACTGGACA
GACGTTTTGTGTTTTACGATTTAATGATGCTTGTCAACTTTTCAAACTCT
TCACTGTTGCCCTCGCCATTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:3060151..3062311 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79118_cuf0 |
| Biotype | protein_coding |
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