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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79292_cuf0 >transcript:BL79292_cuf0-protein ID=transcript:BL79292_cuf0-protein|Name=transcript:BL79292_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=430bp
MFFQQYETKIFKFIWNNGPERVKRKVLYSPYECGGLRLINLYAFNASLKA
SWIPKLYHNTLWFCSKLLSNTHVAFRKGLFPFMQIGDDKVKIVKFLKHEL
PGVSVFFLDALSSWLSFQFNPPENSSHSHVLWYSCHFKIDDKPFLWRDML
DQGILFVHDILDAEGKVLSYTELRLKFDVTVSEFVYNRLISAVSQYRRLK
CCNVRNCSDVQVCRPMLQNYEWIRGVKINKKVYKFFLEKKDLIDHPRNIM
TYWEDQLNDIVPWKEVFLLIHKLTIDPPTRIFQFKLVHKFLATNRLLHIW
KLKDSPLCALCKKEEETIKHLFYDCGKVVEFWRSVQRWLNKTTGLYLNVN
NPMNILLGDHSESVPIVCNLIILLGKVYIFKNRESCTISLHKFIPFVNNF
KCQEETIAGKRNKLSSHFRKWGELQNVLKY Run BLAST on NCBI mRNA from alignment at Sc0000078:1031646..1033693+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79292_cuf0 ID=transcript:BL79292_cuf0|Name=transcript:BL79292_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2048bp|location=Sequence derived from alignment at Sc0000078:1031646..1033693+ (Branchiostoma lanceolatum)
TTTTATCTTAAAATCATTAGAATTCTTTAACTTTGGAAACTCCTTCATCA
AATGGATACAGGTACTTTATAGTAATATATCAAGTAGAATTATCAATTAT
GGACATTTATCTAAGCCATTTATGCCTCAGCGAGGGGTACGGCAAGGATG
CCCCCTGTCTCCGTATCTGTTTATTGTTGCCGTGGAACTTTTAGCCATTA
AAATCAGGAGTAACTCAGATATAAAGGGTTTGATGACAAAAGATATAGAA
TCAAAATTGTCCCAGTATGCGGATGACACTAACTTTACTTTAGAACCCAC
ATCGGTCTCACTTAACGCTTTAACTGAAGATTTAAATCACTTCAGCGCAC
TCTCTGGTCTCACACCCAATTATGACAAATGTAAGGTAGTCAGAATTGGT
TCTCTTAAAGGTACAGGCTTTGTATTACCGTGTCAGTATAGCGTGGAATG
GACTGATGGACCCTTTGATATGTTAGGGACACACGTTCCAGTAAATATGA
ATGAGATCACTTCCATCAACTGTAGTAAGTGCCTTAAGAAACTGGACTCC
ACATTACAGCCGTGGAAAGGAAAACCACTGTCATTGTAAGGCAAAATCGC
AATAATCAATTCCTTGGTTGTTTCGCTCTTTGCGCATATATTTCTTGTTC
TACCTTCTCCGGATCATATGTTTTTTCAACAATATGAAACAAAAATTTTC
AAATTCATTTGGAATAATGGTCCGGAGAGGGTAAAGAGAAAAGTACTTTA
CAGCCCATATGAATGTGGAGGGTTAAGGCTCATTAATTTGTATGCTTTCA
ATGCTTCCTTAAAAGCTTCCTGGATTCCTAAGCTTTATCATAACACACTC
TGGTTTTGTTCAAAACTTCTATCAAACACCCATGTTGCATTTAGAAAGGG
TTTGTTTCCATTCATGCAAATAGGTGATGACAAAGTGAAAATTGTCAAGT
TTCTGAAACATGAGCTCCCTGGTGTAAGTGTATTTTTCTTAGATGCATTA
TCTTCGTGGCTATCATTCCAGTTTAACCCTCCTGAGAATAGTTCGCATTC
CCATGTTCTGTGGTATAGTTGTCACTTTAAAATTGATGATAAACCGTTCT
TATGGAGGGATATGCTGGATCAGGGCATTCTGTTTGTACATGATATTTTA
GATGCAGAAGGAAAAGTGCTGTCTTACACAGAATTAAGATTGAAATTTGA
TGTAACTGTTTCAGAGTTTGTTTATAATAGATTGATATCAGCTGTCTCCC
AGTACCGTCGATTGAAATGTTGTAATGTAAGGAACTGTAGCGATGTACAA
GTATGCAGACCTATGTTACAAAATTATGAGTGGATAAGAGGTGTTAAAAT
CAACAAAAAGGTGTATAAGTTCTTTTTAGAAAAAAAAGATTTGATTGATC
ACCCTAGGAACATCATGACTTACTGGGAAGACCAACTGAACGACATTGTA
CCTTGGAAGGAAGTTTTTCTCCTCATACATAAACTAACAATCGATCCCCC
GACCAGAATCTTTCAATTCAAATTAGTACACAAATTTTTAGCAACAAATA
GATTATTACACATCTGGAAATTGAAAGATTCTCCATTATGTGCCCTTTGT
AAAAAAGAGGAAGAAACAATAAAACACCTTTTCTATGACTGTGGAAAGGT
GGTTGAATTCTGGCGGAGCGTACAAAGATGGTTAAACAAAACAACAGGGC
TTTATCTGAATGTCAATAATCCAATGAACATTCTGTTGGGGGATCATTCC
GAATCTGTGCCGATAGTGTGTAATCTTATTATTCTTCTGGGTAAGGTGTA
CATTTTTAAAAATCGTGAGTCATGTACTATTTCGTTGCATAAATTTATCC
CATTTGTGAATAATTTCAAGTGTCAAGAAGAAACCATCGCAGGAAAAAGA
AATAAGTTAAGTAGTCACTTTAGAAAATGGGGCGAACTTCAAAATGTACT
CAAATACTAGCATGTGTGTGTGTGTGTGTACTCTAATGTTTTCATGTAAT
ACAGCTGTCTTTGTGCTTTTATTCTGTTGAATAAAGATTTAAAAAAAA Coding sequence (CDS) from alignment at Sc0000078:1031646..1033693+ >transcript:BL79292_cuf0 ID=transcript:BL79292_cuf0|Name=transcript:BL79292_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1293bp|location=Sequence derived from alignment at Sc0000078:1031646..1033693+ (Branchiostoma lanceolatum)
ATGTTTTTTCAACAATATGAAACAAAAATTTTCAAATTCATTTGGAATAA
TGGTCCGGAGAGGGTAAAGAGAAAAGTACTTTACAGCCCATATGAATGTG
GAGGGTTAAGGCTCATTAATTTGTATGCTTTCAATGCTTCCTTAAAAGCT
TCCTGGATTCCTAAGCTTTATCATAACACACTCTGGTTTTGTTCAAAACT
TCTATCAAACACCCATGTTGCATTTAGAAAGGGTTTGTTTCCATTCATGC
AAATAGGTGATGACAAAGTGAAAATTGTCAAGTTTCTGAAACATGAGCTC
CCTGGTGTAAGTGTATTTTTCTTAGATGCATTATCTTCGTGGCTATCATT
CCAGTTTAACCCTCCTGAGAATAGTTCGCATTCCCATGTTCTGTGGTATA
GTTGTCACTTTAAAATTGATGATAAACCGTTCTTATGGAGGGATATGCTG
GATCAGGGCATTCTGTTTGTACATGATATTTTAGATGCAGAAGGAAAAGT
GCTGTCTTACACAGAATTAAGATTGAAATTTGATGTAACTGTTTCAGAGT
TTGTTTATAATAGATTGATATCAGCTGTCTCCCAGTACCGTCGATTGAAA
TGTTGTAATGTAAGGAACTGTAGCGATGTACAAGTATGCAGACCTATGTT
ACAAAATTATGAGTGGATAAGAGGTGTTAAAATCAACAAAAAGGTGTATA
AGTTCTTTTTAGAAAAAAAAGATTTGATTGATCACCCTAGGAACATCATG
ACTTACTGGGAAGACCAACTGAACGACATTGTACCTTGGAAGGAAGTTTT
TCTCCTCATACATAAACTAACAATCGATCCCCCGACCAGAATCTTTCAAT
TCAAATTAGTACACAAATTTTTAGCAACAAATAGATTATTACACATCTGG
AAATTGAAAGATTCTCCATTATGTGCCCTTTGTAAAAAAGAGGAAGAAAC
AATAAAACACCTTTTCTATGACTGTGGAAAGGTGGTTGAATTCTGGCGGA
GCGTACAAAGATGGTTAAACAAAACAACAGGGCTTTATCTGAATGTCAAT
AATCCAATGAACATTCTGTTGGGGGATCATTCCGAATCTGTGCCGATAGT
GTGTAATCTTATTATTCTTCTGGGTAAGGTGTACATTTTTAAAAATCGTG
AGTCATGTACTATTTCGTTGCATAAATTTATCCCATTTGTGAATAATTTC
AAGTGTCAAGAAGAAACCATCGCAGGAAAAAGAAATAAGTTAAGTAGTCA
CTTTAGAAAATGGGGCGAACTTCAAAATGTACTCAAATACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000078 | genome | Sc0000078:1031646..1033693 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79292_cuf0 |
| Biotype | protein_coding |
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