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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79554_cuf0 >transcript:BL79554_cuf0-protein ID=transcript:BL79554_cuf0-protein|Name=transcript:BL79554_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=231bp
XHLSCLKITGVPAKWLCPLCHISHKSSKLKSVNTKSKKTSAAPQKALKLQ
SICVCKKTPMVTDKLLECHNDSCGNGKFFHLHCINYKKMPNNASTTWLCL
QCRKKQRVSKSFQQEPDTASSVNHVLDLEREGLTITSVNHNNNIERFAPL
CNLTDDHYALITDPSGWLDCDIIHNAHVLLKRVNPSMDGLQRTTLGPWRT
FARVKNPSSKFCTLEEVTGCVAVLSRVMMEL Run BLAST on NCBI mRNA from alignment at Sc0000029:1776030..1777079- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79554_cuf0 ID=transcript:BL79554_cuf0|Name=transcript:BL79554_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1050bp|location=Sequence derived from alignment at Sc0000029:1776030..1777079- (Branchiostoma lanceolatum)
NNNCATCTGTCTTGTTTGAAGATCACTGGAGTGCCAGCTAAATGGCTTTG
CCCACTCTGTCACATCTCTCACAAGTCATCAAAACTGAAATCTGTCAACA
CAAAATCCAAGAAGACGAGTGCTGCTCCTCAGAAAGCCCTGAAACTCCAG
TCAATATGTGTTTGCAAGAAAACACCAATGGTAACAGACAAACTCCTAGA
ATGCCATAATGACAGTTGTGGGAATGGGAAATTCTTCCATCTACACTGCA
TCAACTACAAAAAAATGCCAAATAATGCTTCCACTACATGGTTATGTTTA
CAGTGCAGGAAGAAGCAACGTGTAAGCAAATCATTTCAGCAGGAGCCTGA
CACTGCCTCATCAGTTAACCATGTGTTAGACTTAGAGAGAGAAGGACTGA
CCATCACAAGTGTAAATCATAACAACAATATTGAAAGGTTTGCACCACTA
TGTAACCTGACAGATGATCACTACGCCCTGATAACAGATCCATCAGGGTG
GCTAGACTGTGATATTATACACAATGCCCATGTCCTTCTCAAGAGAGTCA
ATCCATCTATGGACGGGTTACAGAGAACAACTCTCGGACCTTGGCGCACT
TTTGCAAGAGTCAAGAATCCTTCATCCAAATTCTGCACACTGGAAGAAGT
CACTGGGTGTGTTGCAGTACTGTCAAGAGTAATGATGGAGTTGTAGACTT
ATATGACAGTCTCTTTCACAACATCATTCAAGCTGAGATTGAAGAGCAAG
TCAAATGTTTAGTTGGTGAGGACAATTATGAAGGTCTTCGGGTTGTTGCT
GTTCAGCAACAACCAAATTCAGTAGATTGTGGAGTATTTGCAATCGCATT
TGCCACCTGCCTGGCATATGGAATTCTCCCTCAGTCCGTAGACTTTAACC
AGCCACAACTGAGGGCTCATTTGGCTTCTTGCTTCAAGAATGAGAAGCTG
GAACTGTTCCCAACATATTGACTGCTCAAAATTCAGTCACATCAGTCCTG
AGGATGCCCCCCTCCCCATCTCCACACACTGGCTAAGCTGTGATGAGAAG
Coding sequence (CDS) from alignment at Sc0000029:1776030..1777079- >transcript:BL79554_cuf0 ID=transcript:BL79554_cuf0|Name=transcript:BL79554_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=696bp|location=Sequence derived from alignment at Sc0000029:1776030..1777079- (Branchiostoma lanceolatum)
NNNCATCTGTCTTGTTTGAAGATCACTGGAGTGCCAGCTAAATGGCTTTG
CCCACTCTGTCACATCTCTCACAAGTCATCAAAACTGAAATCTGTCAACA
CAAAATCCAAGAAGACGAGTGCTGCTCCTCAGAAAGCCCTGAAACTCCAG
TCAATATGTGTTTGCAAGAAAACACCAATGGTAACAGACAAACTCCTAGA
ATGCCATAATGACAGTTGTGGGAATGGGAAATTCTTCCATCTACACTGCA
TCAACTACAAAAAAATGCCAAATAATGCTTCCACTACATGGTTATGTTTA
CAGTGCAGGAAGAAGCAACGTGTAAGCAAATCATTTCAGCAGGAGCCTGA
CACTGCCTCATCAGTTAACCATGTGTTAGACTTAGAGAGAGAAGGACTGA
CCATCACAAGTGTAAATCATAACAACAATATTGAAAGGTTTGCACCACTA
TGTAACCTGACAGATGATCACTACGCCCTGATAACAGATCCATCAGGGTG
GCTAGACTGTGATATTATACACAATGCCCATGTCCTTCTCAAGAGAGTCA
ATCCATCTATGGACGGGTTACAGAGAACAACTCTCGGACCTTGGCGCACT
TTTGCAAGAGTCAAGAATCCTTCATCCAAATTCTGCACACTGGAAGAAGT
CACTGGGTGTGTTGCAGTACTGTCAAGAGTAATGATGGAGTTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000029 | genome | Sc0000029:1776030..1777079 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79554_cuf0 |
| Biotype | protein_coding |
|
