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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79646_cuf0 >transcript:BL79646_cuf0-protein ID=transcript:BL79646_cuf0-protein|Name=transcript:BL79646_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=169bp
MLRFRLKMTGSYEFEHQIICSQPDNVNGQRLLDVRPEDLISVCLDPTIVR
FENSVRGDNILVQGQALHLVCEASGIPTLDITVILPSGMNATVESVGRVT
VDVNGVIVINNVTAADAGLYVCIAANYVGSTFAVFSVIDPKPSRSFSLLI
FVVLRLMYSYIPILIDIVM Run BLAST on NCBI mRNA from alignment at xpSc0039718:18682..19657+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79646_cuf0 ID=transcript:BL79646_cuf0|Name=transcript:BL79646_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=976bp|location=Sequence derived from alignment at xpSc0039718:18682..19657+ (Branchiostoma lanceolatum)
AAGTTGGCGCATTCATTTGTGACGCGTCTCCTTGCGTCTGCCAACGGTAT
AATCCAGCTGCTATGCAATGCTGAGGTTTTTGCACTTAGCGGGCATTGGC
CCTACTATTGTCGACTAGTACTACCGCCATCTCGTTTCTACACTACTTGA
TGTAATATCTTTGTCGTTATTGTTTTACGTAGATGTCTGTACATTGTCTC
TGTTGTTCCTTTTTTAATATGGGCCCGTGGCCTGAGCCAACGAATAAAAT
AAAAAAATAAAAAATAAAATAAAACTTACCTCAGAAGCCTATGACTTTCT
GTCATCCGTTTCCAATGTTCGTTTCCGGATAAACATTGGATACAACCCCT
GGCAGTGTGACTGCAGGATGCTTCGCTTCAGACTAAAGATGACGGGTTCA
TATGAATTCGAACACCAAATTATATGTTCCCAACCTGACAATGTCAATGG
GCAAAGGCTACTAGACGTCAGGCCTGAAGATCTGATTTCAGTCTGTCTAG
ACCCAACCATTGTAAGATTCGAGAATAGTGTACGTGGGGACAACATTCTG
GTACAGGGACAGGCTCTCCATTTGGTCTGTGAAGCTTCAGGAATCCCCAC
ACTAGATATCACAGTCATTCTCCCATCTGGAATGAACGCAACTGTTGAGT
CAGTTGGGAGGGTGACTGTAGATGTCAATGGTGTCATCGTCATAAACAAT
GTTACTGCAGCAGATGCTGGTCTGTATGTCTGTATCGCAGCAAATTATGT
TGGTTCCACATTTGCCGTCTTCTCTGTCATCGACCCCAAGCCTTCTCGCA
GTTTCTCCCTCCTTATTTTCGTTGTACTCAGGCTTATGTATTCATATATT
CCTATATTGATTGATATAGTCATGTAGTCATATACCCATGTATTGATTGA
TATACTCATTTATTCATATATCCATGTATTCATTGATATATTATTGAGAT
ACAGCTAGTTGTGCATTTAACGTGCC Coding sequence (CDS) from alignment at xpSc0039718:18682..19657+ >transcript:BL79646_cuf0 ID=transcript:BL79646_cuf0|Name=transcript:BL79646_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=510bp|location=Sequence derived from alignment at xpSc0039718:18682..19657+ (Branchiostoma lanceolatum)
ATGCTTCGCTTCAGACTAAAGATGACGGGTTCATATGAATTCGAACACCA
AATTATATGTTCCCAACCTGACAATGTCAATGGGCAAAGGCTACTAGACG
TCAGGCCTGAAGATCTGATTTCAGTCTGTCTAGACCCAACCATTGTAAGA
TTCGAGAATAGTGTACGTGGGGACAACATTCTGGTACAGGGACAGGCTCT
CCATTTGGTCTGTGAAGCTTCAGGAATCCCCACACTAGATATCACAGTCA
TTCTCCCATCTGGAATGAACGCAACTGTTGAGTCAGTTGGGAGGGTGACT
GTAGATGTCAATGGTGTCATCGTCATAAACAATGTTACTGCAGCAGATGC
TGGTCTGTATGTCTGTATCGCAGCAAATTATGTTGGTTCCACATTTGCCG
TCTTCTCTGTCATCGACCCCAAGCCTTCTCGCAGTTTCTCCCTCCTTATT
TTCGTTGTACTCAGGCTTATGTATTCATATATTCCTATATTGATTGATAT
AGTCATGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039718 | genome | xpSc0039718:18682..19657 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79646_cuf0 |
| Biotype | protein_coding |
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