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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79792_cuf1 >transcript:BL79792_cuf1-protein ID=transcript:BL79792_cuf1-protein|Name=transcript:BL79792_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=126bp
FSSSQGPCCTLQCTPKSSNVECSKESECSASANCDGMNPFCPSPQAKANK
TECNNGRQVCWKGICQGSTCEKFDLEECTCRLNENNRQELCNLCCQEPVR
PLQRTASESCLIYMYTARSQVKAYIA Run BLAST on NCBI mRNA from alignment at Sc0000002:5032027..5036694+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79792_cuf1 ID=transcript:BL79792_cuf1|Name=transcript:BL79792_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=4668bp|location=Sequence derived from alignment at Sc0000002:5032027..5036694+ (Branchiostoma lanceolatum)
TTCAGCTCAAGTCAAGGCCCATGTTGCACCTTGCAGTGCACCCCTAAAAG
TTCAAATGTGGAATGTTCTAAGGAATCAGAGTGCAGCGCTAGCGCCAACT
GCGAATATCCTTTTACTGTGACTAAAGTATTACTTTTTGGCGATAGCTAA
GGGGCAGAGCCGTTTAGTATAGCCCTGCAATTGATTTGTAGATATTCTAT
GAATTCTACAAACGCATTCCCTAGGTATTTTTTTTGGCTACGCCTTGTTG
ATACTGTAAGTGGAGGATTCATTTTAGAACTAGCCCTGTATACATATTTT
ACATATTATAGATATATATATTATGATATTTTTGCGACTACTGTTAATCG
TTATTGTGTGATTGCCTTACTCACTTTTGTATAAGGGCATTAGTCAATAG
GTGAAAATCATAGCTGCCTTTCCACAGATTGGTGCTAAAGTTGTTTGAAC
CTTGACCTCTTACTTACTGGGATGAACCCTTTTTGCCCGTCTCCACAAGC
CAAGGCCAACAAGACAGAGTGCAACAACGGACGCCAAGTGTGCTGGAAAG
GAGTAAGTGTTAAAGGCAACCACTGCAATATTAGGGCCCGAAATATAAAT
TTCAAAAGGCAATGTATTTAGTCATTTCTATACGTGATTAGTTCAAACAA
CACTACCGCAATGTGAAGCGACGTTCATCATGCAAAATTACGGCGTCGTT
GTGACGTGAGAGCTCACTGAACATCGTCGCCAGGTTTTTTTTAGGCTCGC
GAAACTAAGGGAATCATCGTACGGCATGTTTTTGCTCAAAGTATGGATTT
ATTACGCAAATGTGCTAGATAGTGTTAGTTAATGTCACTACTATAAAGAT
TTCAGCATTTTTTATTTCCATATTTCGGTCCCTAGTAATATTGCTTTGAT
TGCCTGTCAACAATCCTGTTTTTGCTACCAAATTCTTGATGACATGACTT
GTGCAAATGACTGCAATGCTGTTTTGTAGAATGTTACATTATGTAAGACA
AAGTTTCTTGAGATTGTAAAAAATTAAAGTCTGGAATAAACATGTAAAAC
AATCCGTTAAAATGATTTTCCAAGGAATTAAAAGGCAATTTTATTCTTTT
TAACTGTTCAACTTGAACTGTACTGATTGCTACATGTACAAACAAATCAT
GTATGAAAGTCACATTGGATTATGTGTAACGGTTATGTTTATAGTTCTAA
GTACAAAAAGTAATACATGTATCTATTACCTTGATGAAATGTCATGGAGG
TTATAGTTTTATCATGAATCTTTCTTTTGCCAGATTTGCCAAGGATCCAC
CTGTGAGAAGTTTGACCTTGAGGAATGCACCTGTCGTCTGAATGAGAACA
ACCGACAAGAGCTGTGTAACCTTTGCTGCCAGGAACCAGGTACAGGTGTT
CAATTAGTCAGTAGGCTCATCACTTAGTTAGTTAGCTAATCAGTTCATTA
ACTAATCACCTATTTGGTTAGCTCATCCGTTTCTTAGATGTCTAATCAGT
TAGTTTGTTGTGTCACATGTTCTGCCAGGAACGAGATATGGGTGTTTAGT
TAGCTAAGCAGTTACTTAGCTCATCAGCTAGTTAACTAGTCAGTTAGGTA
ATCAGTTAGTTAGCTAATCAGTTAGTTAGGTAATCACCTAGTTAGCTAAT
CGGTTAGGTAGCTGTGTCACATGTGTTGCCAGGAACGGGGTATGTGTGTT
TAGTTACTTAGTTAGATAATCATTAGTATTTTTTCGTTAGTTAGACCATT
GCAGAGAACAGCCAGCGAGAGTTGTTTGATCTACATGTATACTGCCAGGA
GCCAGGTAAAGGCATACATAGCATAGTTAGTTAATCAATTAATTAGTTAA
GTAGTTTTGATTTCGCATACTTTTACAGTGAAATCTTTATTGACACGACA
AAAGTACAGCGACTTTCGTATGGTCTTCTACAACTATACTTGCCAAACGA
CAAACAACGGTATACAAAATGATTAACCTAAGTACAAGTATATGCATTTG
GGTACTTCAACATGTCGAGTTTAACGTATCACTTACACTACTAGTTGTAA
GATCGAAACATTCTTTCAGACTAATAATAGCTTCTCACTCAAAATGAAAC
CGCAAAGTTCAATATAAAACCACAGCAAATATTTCATTATGTACAGTATG
ATATACAAAATGCTTCTGTTATCAGCAGCAACAGTTCCGAGTGGCCGTCT
CAGTACCAGGGTCTGACATCGCGTGGCATCCTTAAACTGCCGCCAGGAAC
GCCCTGCGACGACTACCAGGGGTACTGCAACAAGGATTTCATCTGCCAAC
AGGTCTCCGTAGCGTCCTGTCCATGGCTTTACGTTATGTGCTTGCAATAC
TTGGCTGTATCTATAGGCGTAACACTACTGAATTATGGTGTAATCTGCTG
AACTTCACTTTACCTTCAGTGCGGTTTTTTTCGTGTTAAGAGGGAAATTG
CGCTGTTTGGTGTGTTATGAATTTAGCTAAGCAGTTGAAACAAGTCTGCA
GTACAGAAGTCAGCCATACAAGATAGACATATTCATGATGCTATGAATTT
ACAGTAGAACGACCACTGCAACAAAACATGGAAATACAGCCACAGTGACA
ATTTCATGAGCCCTGGAAGATTAGCCCTCTACAGGGGCTAAAGGGTATCT
CAATAAACTCAATAAACTCAACTCATGGTTTACTGTAGTATAAGAGTGGC
TGAAGCAGACTATTTAGATTAATTGTGATTTTTTGTGCCCCATATCAATT
GAGCAGGAGATCAGAGATTCTGCTGTTACTTGCCTTCTTACTTAAGCATG
AAAGCTTGATATATGTGTTGATGATTATATGTAAAATACATTTTGCTTTG
AATCAACCAACATTATAATCAAGAATGAATATCTAGTTATTTCGAAAATG
GGCTCTTAGAGTAAGAATAAGAAGTGTTAAAATGTGGGTCGTAGGACAAT
TTCGTTATACAGAATAACTTTTTATTGCAACATATTTCCAATATGTATGA
CTTGTTATGGTATGGCTTTTGAAAACCTCGCACGACAAGTCTACGTTAGC
CAACGCAACATCATAAACCACCCCGTTCGCTTCGCTTATTTGGCGGTTAC
AGGAACCGGCCATGCCTTCTGACACCGTATGAACCTCGGATCCACGGAGT
TATCAACCCGCCAGTACAGCGCAATTTTAGATTACATCAATGAATTAATA
ACACAGTGAATTCACTTGTCCTGGCACACACAAAATCTACAACCTACAAA
GCCTCCAATTTAATTTGGGAATGCCAGTTTAATTTGGGACTACCTCCCAC
ATGTCATTAATCAGTAATCCAAATGTCTTGATATCACATCTGGTAGGTGA
AAGTGAAGTTGAAAATATGTAGACGCCATGGATGACCCCCTGGGGATTAG
CCCAATTCTACCGAATTATGGGAACCAGAACTGGAGCTAGAACTCCGCAG
AATTCTGAGAATTATAACAGAATTCTGAGAATTATAACAGAATTCTGAGA
ACTATAACAGAATTCTGAGAATTATAACAGAATTCTGAGAATTATAACAG
AATTCTGAGAATTATATCAGAATTCTGAGAATTATAGCCAGAATTCTCAG
AACTGGAGCCAGAATTCTGAAAACTGGAGCCAGAATTCTGGGAACTAGAG
TGATAACTCAGAAGACGTTCCTCAGTGTCCTTACTTTTCCTATGTTCATC
CGTACCCGTCACTTATTTTGTAACTACCACTTGTACACGTGCAAACTGCT
AGTAATCGAGGCATAGCAGAAAGAAAGAAGAAGAAGTTTCATTTGCCAAA
AGAAATATAAACAATTTGGTTATCTTTACACTAGTGCCATTCTGATTCGA
CATGTTCTCAGCTCTTTTGCAGAAGTTACCAAGTCTTTTACAATTTACAA
ACATGTGTATATACGTCTCATTTTCATTACACATTGGGCTATATATATCT
CACCCACCGGGTTTCTAATTTGCCATTTGTTTAGTTTTGCTTTACAGGGT
AGGATATTATACAAGAGTTTGAAATTAAGTTCTCTCAATTTGTTTTCCTT
AACATTCACAATAAAACTTCTTATCTAAAATCCTAACATCAAGTGTTTCA
CTCGACTTATCAATACATCTACTATCTATCACTTCTTGTGTTTTAATCTG
GTTACATGATGTACTGAATGTTAGCTTTTCTAAAGGACCAAATACAGTGT
CAAAAGTTCCAAGTTGTTGTGTTTGCAGTTCAGCTTCTCTGGATTGGTCC
ATGGATACTGACTGCCACTGGTAACCTTCATTAACATTAATCCGCCGGGT
TACATAAATCCGCCACTTAAAAAAACAGTGGGTTTGAGATGTCTCTAGTG
CAGCATCCTCGGGTATGCACAATTTAGATATACAGGAGTGCATTAAACTG
GGGGACGTTGGGTTGGAGATCTGTTTGGAGGTATCTTCTCAGGGTGGCGG
AATTATGTACCCTTGCGGAATTATGTTAGTAGATGTTAGATCTACTTCGA
GATTAAGTCTGACCTGTATTAATAATACGTACTGGAATTTGGTTTGAACA
GCAGACAGGGCAAAAATTACATCTCAATCCATTTAATGTGATTTTTGTTG
ACTTGAATCCTGAAGCCCCCGTCATAGGTAATTTTATTAGGTAAATTTTG
CATAAAAGTAGAAAGGCC Coding sequence (CDS) from alignment at Sc0000002:5032027..5036694+ >transcript:BL79792_cuf1 ID=transcript:BL79792_cuf1|Name=transcript:BL79792_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1524bp|location=Sequence derived from alignment at Sc0000002:5032027..5036694+ (Branchiostoma lanceolatum)
TTCAGCTCAAGTCAAGGCCCATGTTGCACCTTGCAGTGCACCCCTAAAAG
TTCAAATGTGGAATGTTCTAAGGAATCAGAGTGCAGCGCTAGCGCCAACT
GCGATGGGATGAACCCTTTTTGCCCGTCTCCACAAGCCAAGGCCAACAAG
ACAGAGTGCAACAACGGACGCCAAGTGTGCTGGAAAGGAATTTGCCAAGG
ATCCACCTGTGAGAAGTTTGACCTTGAGGAATGCACCTGTCGTCTGAATG
AGAACAACCGACAAGAGCTGTGTAACCTTTGCTGCCAGGAACCAGTTAGA
CCATTGCAGAGAACAGCCAGCGAGAGTTGTTTGATCTACATGTATACTGC
CAGGAGCCAGGTAAAGGCATACATAGCATAGTTCAGCTCAAGTCAAGGCC
CATGTTGCACCTTGCAGTGCACCCCTAAAAGTTCAAATGTGGAATGTTCT
AAGGAATCAGAGTGCAGCGCTAGCGCCAACTGCGATGGGATGAACCCTTT
TTGCCCGTCTCCACAAGCCAAGGCCAACAAGACAGAGTGCAACAACGGAC
GCCAAGTGTGCTGGAAAGGAATTTGCCAAGGATCCACCTGTGAGAAGTTT
GACCTTGAGGAATGCACCTGTCGTCTGAATGAGAACAACCGACAAGAGCT
GTGTAACCTTTGCTGCCAGGAACCAGTTAGACCATTGCAGAGAACAGCCA
GCGAGAGTTGTTTGATCTACATGTATACTGCCAGGAGCCAGGTAAAGGCA
TACATAGCATAGTTCAGCTCAAGTCAAGGCCCATGTTGCACCTTGCAGTG
CACCCCTAAAAGTTCAAATGTGGAATGTTCTAAGGAATCAGAGTGCAGCG
CTAGCGCCAACTGCGATGGGATGAACCCTTTTTGCCCGTCTCCACAAGCC
AAGGCCAACAAGACAGAGTGCAACAACGGACGCCAAGTGTGCTGGAAAGG
AATTTGCCAAGGATCCACCTGTGAGAAGTTTGACCTTGAGGAATGCACCT
GTCGTCTGAATGAGAACAACCGACAAGAGCTGTGTAACCTTTGCTGCCAG
GAACCAGTTAGACCATTGCAGAGAACAGCCAGCGAGAGTTGTTTGATCTA
CATGTATACTGCCAGGAGCCAGGTAAAGGCATACATAGCATAGTTCAGCT
CAAGTCAAGGCCCATGTTGCACCTTGCAGTGCACCCCTAAAAGTTCAAAT
GTGGAATGTTCTAAGGAATCAGAGTGCAGCGCTAGCGCCAACTGCGATGG
GATGAACCCTTTTTGCCCGTCTCCACAAGCCAAGGCCAACAAGACAGAGT
GCAACAACGGACGCCAAGTGTGCTGGAAAGGAATTTGCCAAGGATCCACC
TGTGAGAAGTTTGACCTTGAGGAATGCACCTGTCGTCTGAATGAGAACAA
CCGACAAGAGCTGTGTAACCTTTGCTGCCAGGAACCAGTTAGACCATTGC
AGAGAACAGCCAGCGAGAGTTGTTTGATCTACATGTATACTGCCAGGAGC
CAGGTAAAGGCATACATAGCATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000002 | genome | Sc0000002:5032027..5036694 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79792_cuf1 |
| Biotype | protein_coding |
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