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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80143_cuf0 >transcript:BL80143_cuf0-protein ID=transcript:BL80143_cuf0-protein|Name=transcript:BL80143_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=337bp
MAGVPGRAQPTLEMANSGEQDHVMPRNMNEFAGSLASNLTWAVNGWSKEM
SRLLSENARLSAELRDLKERTASVASVRAGRDQQNVEDITDPNRPTQIGL
LYNQFIDGERMDAVDSLQKEFPDKHYANPRLVCEIFEVAFEVATVAISSV
REHLPRTLVNPASLRTPPLKPQQKQRAEKEPIEVYFKYSTTPDMETHYRD
EDIKYITNIISAYLRRTSDSIDIIAMKEDVLSELEKRCPPNQQRLLFKKV
RLVQNFVSDCCKLAWQLVVQTPSMHIQYNEKTFDKIKHNLSNRQSSTSKA
TTSKMISIRHYLWPTLLDKLNGKVVCKGIVVTGESEG Run BLAST on NCBI mRNA from alignment at Sc0000086:1110374..1122989+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80143_cuf0 ID=transcript:BL80143_cuf0|Name=transcript:BL80143_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=12616bp|location=Sequence derived from alignment at Sc0000086:1110374..1122989+ (Branchiostoma lanceolatum)
CTCCCATACTTCATTGATCAGCAATGGCAGGTGTGCCCGGTCGTGCTCAG
CCAACTCTTGAAATGGCAAATTCAGGTGAACAGGATCATGTCATGCCCAG
AAATATGAACGAGTTTGCAGGTTCATTGGCAAGTAATCTGACATGGGCAG
TCAACGGTTGGAGCAAAGAAATGTCCCGCCTGTTGTCAGAGAATGCGAGA
CTGTCGGCGGAATTACGGGACCTGAAAGAACGGTGAGGTCTTTCATATAA
CGTTAACGTTACATCCCCAAAACCATATACCTATCACGTGCTGCTATTAA
GTGCTATTTTATATTTATATTTCTAGAAGCTCACGAAGTGAGTGGATAAA
GGAAGTCTGGACATAACTAGAATCTGATGTAGGGTATTTCTACTGAATGA
ATACAAATTAGAAATGATTTTGAGGACGCCCTCCATACTTTCAGTATTTT
CAGCCGTTTACACTCGAACGTTAGTACTGGCATTACTGCTGTGGGCAACG
CCAAACGTAGGCAGTTTACACACTCGGAGTACACTCAGCCTAAAGTCCGA
ATCAACTGTGGTCTGTTTACACACGGGGCCGCGAAGTGGCTTGGAACGGT
CTGCCTTTTTACCGAAATACCCCGGAATGCCCCGGAATGCCCATAAAGGA
GGGTGCATTCTATCGAAATACACTATGCTTCGATGAGTTAACATCACAGA
TTGCTGTATTTTGGCATGAAATGATAGATTTATGACCCAGGGAAATCACT
AGAAATTAGCGATGGCCATCGGCGTCGGCGCCCCGCCAGTCGCCATGTTT
GTTTTTACTGCGGATTACAAATGTTTGTTTAGCAGGGTGAGTGAGAAATA
CACAAAAAGGAGGTGAAATGTCGCAAATACAGTATGCTTTGTTAAGCAAT
GTTAACTTACCAAAGCATACTGTATTTCTAAAATTTTCACCTCCTTTTTA
GTACATTTCTCACTGTGACCACACTAAACAAACAGTGTAATCGGCAATGA
AAACAAACATGGTGACTGGTCGGGGGACTATCACTGATCACCTTGAATTT
CTAGTGATTTCTTGATCCCAGGGTCATGTATACGTTATCTCATGTCAAGG
TATATAGCAACCTGTGATGTTAACTTACGACATTTCACCTGCTTTTTGTG
TATTTCTCACTCACCCTGCTAAACGAACATTTGTAATCCGTAATAAAAAC
AAACATGGCGACTGGCGGGAGCGCCGACGCCGATGGCCATCGCTAATTTT
TAGTGATTTCTCGTTCCCTGGGCCATAAACATATCATTTCATGCCAAAAA
ACAGCAACCTTTGATGTTTACTCATCAAAGCATAGTGTATTCCAGTAGAA
TTCACCCTCCTTTATGGGCATTCCGGGGCATTCCAGTACAGTGTAAAAGG
GCATTCCGGTAAAAAGGCAGACCCACGTGCACTTGGAACGCCCAGCTGCG
CCCGGCGTAGTGTGACGGCCGTAGTATTGTCTCGCTTTGAATCATGGCCA
ACATGCACAACAGTGTGATAGAATCTTTATCGGATACCGAAAAATTATGG
CATAAAGAGAAAGAAAAAATTTCCAAATTTGCGCCAAGTTCTCTCGCTAA
TTTTCATATGGCCTGACCTGAGCACTGCATGATATAACTTCCATGGGACT
CGGAGTCGACACCGTGGATTTACACACAACGCGACGTGAGTCCGATGGGT
ATTACGTAATGATCCTAACGTTGATGCGTTCAGTGATACTATCATGACAC
AATTCCATCCTAGTTTTCTTTCATTTACATTTCGTGGGCCGTTGAATTGA
GGGGCCGTTGTTATTAATTTTCAGTCGGATTTTTGAGAAATTTCGGTAAG
AATATCTAAGATCGTTAATGCATCTTTTATCACAACACATTTTGAAACTT
ACTGTGTCAAATTGTTACCCAAAGGCTTAAGTTCTTTCTATGTATTAAAT
GTCCTTGGTTGGTTATATTTATATATATAACTCAAGAGTTTCAGGTTATC
TGTGTGACCTAGGGGTCAAAGGTGAACAAAAGCAAAGGTTGTTGTAAAGA
TGGCGTCACAACTAAGTTAATGCATATTTGCCTTGAAAGTGTGATTGTAG
CTAGGTGAATTTTTAACAGGTAAGTTTGAATTTTCATCTTTTCGACGGGA
GTTTCTGTCGTTATCTAGGATGCCAGACTATACACTGTCGTCTATAGGTC
AGAGGTACAGTACTGGTGCTGGCAGTGGTAGGGGTCATTGGCCTGTAATG
TGACTGGCAAGTTACTGAGCTTGCGCTCAGGCTGATCTGATACTGATCCG
GGACTGTCTTGACAGGCCTGAAATGCAACTGTTAGCAGCTGAAATTCCAA
CTACTACTGTTAGTCGTCAGTTCTCCTATTCCACTACTGACAGCCATTTA
TAATTACGGTCAGCCAAATACAGTCTTACATCTGGCGAATCCGAGATACC
AGTTGCTTAATTGATACCAGGCCAGGGAATTTTGAATTCCTCAGTCAGAA
GACAGTTACATGTTGATATTAGCCTGGGGTAGAAATATGTTACTCTGATT
TAGCTATCCTCCAAATCCCAGATTTTGCAGCTTGGAAAAGACAACAATTG
CCAAAAATATTATTTGGAAGTACTTTGGAGGTGGCGATTATTGTACATTA
CGTTTTTGAGGTAAGACATTTGGCCACATATTACCTATAAAGCACATTTT
GATTTCTGTGTGGGAAGGGGACTGTAAATGCCTCTCAGTCATCCAGCATT
GTTTCTCTCCCAGCCTTAGATGTTCAAACCACCTAAATCTAGAAGGTACT
GCACAACTATTAGAAATTTCAGAATAGCATACTCTGCTACATGTTTGTGG
TACCATATACTGCTGATAGAAGACTACATGTTTTGGTAAATCTCTCTGAA
GCTGCTGAATAGATTCAAGGACGAGCATGTTCGTCCATATGCTGATTGGA
GGTCGTGAGAAACTATAGCTTTCACCATTGTTCACCATGAATACACCATC
TAGTACAGTAATAGTTTTACAGTACTGCCTTATTGGTTGCTGGTCTAAAA
TAGATACAAAAGAGCGACATGATCATGTAAGTTTGTCATCATCACCATGC
AAGTTGTCGTCACCCCTGAGGTCGAGGAGAATTCCCTTGGTCTTTTGCAT
CCAAGTAAAGTGTATTCAAGACTGTATCTTCCATATCATGCAAACACACA
CAAGCAGGCTGAAGAAGATAATTGTCCCTCAATTTTCCACAAATGTAAAT
TACATTAATGATTAAATCTTGATTTCCTTTATGTGTACCCACAGCTAAAA
GTCAGAAGGGACTTGACTTGCCCTGTCCTAAGGTTATAGGAGTAAACTGA
TACTCTTTGGTTACCTCCCATGACATCTTAATCTGCTGAAACACGGGGAA
GGAGACAAGAAGTCTTCGTAAAAACACTAAGTTTTCTAACATTTGCTAGA
TAGGTAGGTAAAACTATGTATTTTCAGAAACCTTAGATCAGACTGAGATG
ACTGACACGAGAAAATTAGATTATGGCTGGTTTATTTAATGTATGGAGGT
TTTCCACCAATGGTGTCTGAAAATATTAGCTCCGAAATTAGGTCAACACA
ATATCAACCATCTGTGTGGTGTCCAGACCATGTAATTGTAAACAATTTCT
TCACCAGTTTTCGAATACACAACAGAAAATTAGTTATACCATAATGAGTT
TGACAAGCGGTCCAATGATTGTCACTAAGACAAGAATTAGGCCCACTTTT
GCCTTGGCGCGTTTTACCGATCCGAACCGGTTCGATACCGGTTCGTTACC
GTTTCGGTTGTCTTTAAACCTACGGGTGGAAGCGCAGTGCGCCACCCGCG
GCGCAAGATATTACAGTCGCGTGCGATTCAAAATGGCGCCGTATAAGAGC
CGCTTATTTTCGTCTTGCCAGGCAGTAGTTCGATACTTTTTATGTTTGCT
ACACACGTTTTCTTGCATATGAGACGCCGCGTACGCGCCCTACAAAAAAG
GAGGATGAGACACATGTACAGGGACGGGCAAGACCCACTGGCCAGACTTG
AACCTGCCGGCGTTCGTCCTCGCCGGCAGTACGAGGACGGTACTGGAAGA
TCCTGGAAGTACTGCAGTACTGCAAGCTGGGCACATTGATCGGGTCATAG
GAGAACACCAAAGAAGCAGCCACTGGTGGCAGGCCATTGCACTTGAAACA
TTCGACAACTTTCAATGACAATTGCACAAACGTTTCAGAATGAGGAAAGT
ATGCTTCTATCGCTATCGCAGGCTTATCATCATATCATTATCATGACCTC
CTAAGCGTTACCGGAGCCGGTTTCCTCTTTACACACAGAGAGGAACCGTC
ACAGCCCCCCGCTGAAGCGGCGCAGACCGGGGTTGGGATGTGGTCTGGGT
CGGTTCCATAAAAAACCGACCTGTGACGTTCATTCCTCTTTAGGCCGGTA
ACAGTAAGTGATCCAGTTCAGTTAAAGTGAACCAGTTCGGTTAAAACGCG
CCAAGTCTAAAGTGGGTCTTACTGTGAGTATTACTGGCACTAGAGGTACA
TGTACAAAATGTCTTATCGGTTCAGGAGAGACTGCAAGTATTGTACAATG
GATGAAGTGGAAACTGACAGAAGTGTATTTCATTTCTTAACTACAAACTT
TTTAGTCAGAAAAATGTTACTTTATGATATGATTTTACATCTGTTTCCTG
AATTTTTGGTTTGAATTTTAGGTCCCTTGGGAATATATAATCTGACCCCT
GAGGGATTTAATACCTTTTGGGGAGTTTTAAGCCTTAGACTTTAGATAAC
ATGACAAAAATGGTATTTATGTATAATTCTGTATCCAATGGTTGCATTTT
ACAGTTCTTCCAATTTTCAAGTAATTTTAACTGATTTTCAAAAGTTTAGT
TTTTACGCGCAAAAAGGTTTAAATTTGCACGTGAAAGAATCTGCTTGAAA
AAAGCTGAAATTAAGCTGATAAAATGTACAAAAGCCTTAAGTAGTTACAT
TTTACAACACAAATGCTTAATATAATTAAGTTAACCATGTGTTTCTAAAA
GAAATTGAGTATTTTCAAAATAATGTTAAGGTTTCAAGCCCCAAAAAGTT
AAACTCCCAAGGGACCTATTTCCAGGGGACCTAGAAATCAGGAGTTTTCA
GATCAAAAATTCAGGTTACAAATGAAAATTGTATCACAGGGACACATTTT
TATGCCTAAGGATTTTGTACTACATATTTTAATACCTTTTTTTTCACGCG
CAAATTCTTCACGCGCACGCGCAAATTCTCCACGTGCAGAAAACCCGTTC
CCGACTGTAATGTGGTGTTAATCTCCAAGCAGATCTAATGGTTGAAAAGA
CCGTATCCGACTGGCAGAAGAATTTTTTATTGCAATAAAAACTTCTTCTG
CCAGTTGGATACGGTCTTTTCAACCATTAGATCTGCTTGGTGATTAATGT
GGTGTGTCGATCTTATAGCTCGACGAATGGTGACCTATAATATAGACCTA
TAGTAGCATTAGTGTACTCTGTTATACCTGGAAGCAGCATCTATATCATT
GAATGGTCGACTTAAGCAGAGGCACTCAAAGACTTTTTCCTGTCAATGTA
GTTCTCATTGAGGTCATCAATCTTTTTTATATTACCTACAGCACTGCAAG
TGTTGCATCTGTACGTGCTGGGAGAGACCAACAAAATGTGGAGGACATCA
CAGATCCTAACAGGCCTACACAGATTGGGCTATTATATAACCAGTTCATT
GATGGAGAACGAATGGATGCAGTAGATTCACTTCAGAAAGAGTTCCCAGA
TAAGCACTATGCAAATCCAAGGCTTGTTTGTGAAATATTTGAGGTAAGTT
AACCACAATGTCCAAAGAAATTATATTTTGTGGGGAAAATGTACAACTCT
GCATAGTGTTATCTACTTATTATGATTATCAACTGTCATTCTTGCCATAC
ATTGTGCCATGTACAATTGTCGAGCAATAAAGTTCATTCACTTTACCGTT
TTGTTACAACATCATAATTGTACTTTTCTAATATTTCTCTGCATGTTTTG
TCATAACGCTTAAGATATTGATATCACAACTCATAATAGCGATTGATTGT
ACTTTTTTGTCTAACTTTGAAATTGTTAACTTTTCTTCTGGCTGATTTCA
CTTGGCATAAGCTTTGATTAGTCTTATTTAGCTTTGAAATATCCACTTAG
GCTCTGCATTAAATTGGTCTGTCATTTTGTTTGATGCAGATATGGTAACA
CGCTTTTTCTTAATATCTTTCTTACTACATAGCCACTAAGCTATAATTAC
ACCACAAAAATGTAGTCAAGTATATTCAACTCATTTAAAAGGTGAGGCCC
CACCAATTCAATTTTTTGGTTCTCAGAATCGCCCCCTTCTATTTTTTTCT
GAATTGAAGATAAAAAGATTCACCACACCTCCAATTCAGGAAATCGTTAC
TGATTAAGGCCACACTAATTGTATTTGCTGCTTGGCATGGCCACTCCTAT
TTTCCTAAAACTGGGACATAACTCCCATTCACAAATTTGATTTCCTTTGC
AATTATTCAATCGATTGAAGAAGCTGTAGGGTACTGATATGTACCAAAGA
CCTAAGATTCCAAAACAATGTAGTCACAATCTATGCTATCAATAAAATAC
AATTTTTCATTCACGAAAACTATTCCTCAATATCAATCCATATGCAAAGC
AACAAAAAGTACAAAACATATATGATGTGAACAAATTTCATTTTGACAAA
TCTCAAACTCAAAGTTCAAATACATGAATCATATTAATGACCTTCCAGAA
GGCAGCAATAACATCGGCCTTAGTTTGCATTTACATAATTTTTGCAAGTT
TACTTGATCAAATTAATTGAATTAATGCAAATGATTTATTTTTTTAAATT
ATGTCTATTTTCAGAAATGAAATAACATTTTGTTGTTTGATGAGTGGATT
GATATTGACAGCTTTTTAAAAAAGACAAATTTAAGCAAAGAAAGTATAAT
AAAATGTCCTCATCATAAGTGTCATGTAAATTATTGTCATAATTGATCCA
CAACACTTGAATAACCCTGTTCTTCTTTATATTGTAACGTTATATCTGTA
CCGAAACATTTTGTATATTTTTTTTCACCGTTACCCCAATTTTTTTCTGA
ATAAATCCAAGAAGCAACACATTTTTTGGCCCTGTCGTTCGAACCAGCAA
ACTAAATTGGTGTGACCTAATAAAGCCGAGAAAGCAATAACGACAATGGT
ACAGAATTTTGCAGATGACTTAAACACCATCCTCGAAACGCCTTCCTGCA
GACTGTAATATACAGGGAATATCGTATATCCATGATACTATCATATCATG
TATCATTTTATATCATATCACATATTATAGTATGTTATATCATATGTTAT
CACATATTATGATCTATCATATAATATCAATGATAACATCATAATGATTT
CATCAAGATTGGGGGTGAATGAATTGATCATTGATTAGATATTGATTTCA
TCCAATTCTGTCTTGACAACAGGTTGCTTTTGAAGTTGCAACAGTGGCAA
TCTCCAGTGTACGTGAGCATCTACCAAGGACCTTAGTGAATCCAGCATCT
CTTCGTACTCCACCGCTAAAACCACAACAAAAGCAACGTGCAGAGAAAGA
ACCTGTATGTTTCCCGTGATATGATATTTATCTAAGCAGCTTCATGAACA
GCATACATTACTGAAAAGCCAGAACATTTCTATGGAATATCTGGAAAAAA
AACAATTGTTACATCATCAGGAAAAGAACACAGAACAATGAATGTTCATG
AAAATCCATTTATCCCTTCAGTTATCATGTGTCAAATTGTCCAATAAAAC
ACCATTGCCATTCCAAAGAAAGCCGCTTGGAGTCCCAAAGTTATGTCACC
CCCCCCCCCCCTAAAGCACATTGAGGATATCTAATATACGTAGCTTACTG
TAAATTGTGTGATATTCGCGATTGTTTTATGTCACATTAATGTCATGGTG
AACTCTCATTGAAAAATGACATCACACTGCCAACAATTGCTTTGTCTTGC
ATTGCATTCACAATTTTGTTTGAACAATAACATCAAAGACGCAATGAACT
CTTGATTTTCACCTAACTTGATTTTCACCTAATTGCCATGAACTTAAATA
AATTGACATGATCATCCAAAAACTGTGACCATGGCGTGGCATGTTCTGAG
GACTTGAGATTCAAATAACATGGATCCAATGATGTTATAGAGCTATTATG
TAGATTAACAGAACTGACTACAAAGTTCTATTCCATCCATATCATTTCAG
ATTGAAGTTTACTTCAAATACTCCACAACGCCTGACATGGAAACACACTA
CAGAGACGAAGACATAAAGTACATCACCAATATCATATCTGCCTACCTGA
GGAGGACATCAGACAGTATTGACATCATAGCAATGAAAGAGGTGCAAAAT
ATGTCAATCATTGTATGAGTGTCCTCTGTGTATCTGTGTAGTTAGAACTC
AGGTAAATTTAGATGCAAAGCTAATGACCTTATGACACTAAAACACAGTG
TCTTCTGATTATGTTCAGCAACGAATCACATCATTACGAAGTACTACATG
TCATTGAGTATTACGTGCATTGAAATATACACCCTTGTCCTGTTACTGAA
AGAGACACCATCAAAAATCATTCTACAGACTCAAGGTTTTTGTCGCAAGG
TAACCCAATCAACTAGACTCCGATATTGTCATGGTGAATGTATTATATAC
AAGTGACCAGTTCGGAAAATGGTCATACACTGTACTTCTGAAAAGTCTTG
AAAGTAAATATTGCAAGTACATTGTAATGTCTTGAATTTCCATGTAAACA
TTATTACTATTCATAGCACCGTTGGCTTCTCAAAAGGAAATTTTTCAGTT
TCCAAACATTTAATTGTAAGTTGAAGCTGATTAACTCATCTATAAAATCA
TGTGTCGTATATAAATTGATTTAATTGCCATCAAAATTGCCATACTCTAG
ATCGACCCCAACATGAAAAACTGAGAATTTATAGCAATTATCACACAACA
TACATTTATTAGCTCTCCCCATGAATTATAATCTTATGATCAAAACCTGA
ATACTCAGGTCATCAATAACGCTGAACATTACTCATGATTTTTTTGTAGG
ATGTTCTGTCGGAGCTTGAGAAAAGGTGCCCACCTAACCAGCAACGCCTG
TTATTCAAGAAAGTGCGGCTCGTGCAGAACTTTGTTTCAGATTGCTGCAA
GTTGGCCTGGCAACTAGTAGTGCAGACTCCATCGATGCACATTCAGTACA
ATGAAAAGACATTTGATAAGATAAAGCATAACCTATCAAATAGGCAGTCT
TCCACAAGTAAAGCTACTACTAGTAAAATGATATCGATTCGCCATTACCT
GTGGCCAACTTTGCTTGACAAACTGAATGGCAAAGTTGTGTGCAAGGGTA
TTGTGGTCACTGGGGAAAGCGAAGGCTAGAACTAAGAATTTATGATGTGG
CATTCCACAAACCCAATGCAAGTTAATTGATTGGACTCTCTACCTACATT
CAGTACACATGTGTTACAGAAATTTTGGTCAGATGGCCTAAATGAAGTTA
ATGTGTAACTTAACCAACTACTTTTAGATTACTTCGTAACCAGATGAATT
CAAGAGCCTTGCTGACGGATAAATCTCCTTCAGTATCATACTCTTGATTG
TATTGAACAAAGACAAAGCATATTTAGCCCAGTTATGTCACTTTTCACTA
CAGATTGCAAGCACACGTGACTAATAGTATACTGAGGCATTTTCATTGAC
CTCATAATGATTATGATTTGAAGCCCTAACGGCCATGTTGTGTAATTGGA
TTAAGAAGTAGCATGCTGACAGTCATGTTTTCACAGACATTCAGTGTGAT
CCAATATGGCACAAATGATGTCAAATAAAAAGCCTGTATAGATCTACCAA
AATCATAAAGAAATACTTAAGGTCTCATTCATGAGTTTTTTCGCCCCATA
GGCTTATTTTTATTACATGCATATTACATTAGATTCTGCACGAACAACTA
CGCCAGGGGTGCTAGTGTCACCAAAATGAAAACAGATCTGCAGTGGATGT
CACTCGAGGAGAGAAGGAAAATGTCCAGACTATGCATGATGTACAAAATG
ACTAATAAATTGGTGGACGTACCAACTAATAAGTATCTAATACCAGCTCA
GAAAAGGACAAGAAATAGCCATGCCTTTAAGTATCAGACTTTTCAACCTA
GGATTGATGTGTTTAAGAATTCGTATTTTCCTAGAACGATCGTAGAGTGG
AACTCGTTACAACCAAGTACAGTGGAAGCATCCTCATTAGATAGCTTTAA
ACAATGCATGCAGTTAGATATGCGAATGTTAGACGTGACAGGTCGTTCGG
TGTAATATAACCAGCTGCTGCCGCGCCGCGTGCCTGCGAAGCTGGTGTGT
TACGCCGAATGGCGGTTATACCGGCTATAAAGATACAGATACAGATACAT
GTTATAAAACGTGTTTTACATGGGCGCGTTCGTAACAAAGCTATACGAAA
TGTGCCAATGTTTTTCATTCCATGTTGAGAACATGTACCCTAGATTATGT
AAAAAAATGACAACATTTTCATTACACACAATCTCTTTTGATAGCAATTA
CAATCTGAACTTGGCTACACCCCCAAAAAGCCACTTTCTAGCTGTAAGCG
CCGGACCGATTCACACACAATGCCCGGGCTGTGTACTTCCGACCCCGCGC
GCGGCTGCCGAACTTTGCCTGCTAATTTCTTCAGTTACAAACAAGCTTTC
ATCAGTTTGACGCTTGATATCAGCTGGGCTAGCTAAAAGGGCATGTCCCA
CCGATATAGACACACGTTCTTGCAGCCGTTCATTTTTTGGGCAAACGGAC
TCTTTTAGCCACTAGGAGTAATACAGGAATGAGACCTTAAGTGCAACATA
GACCCTGAGTGAGTGAAGTTAGTTAAGGATGCATATTCTTATTTATAGTG
TTGTTACTCCCTGCGAGCTAGGGAATAATCTTTTACATAAAATTTATTAC
TGAACCATTGGGTACCTTACATTTTTATATTTTGGCTTGTAGCCAAGGTT
ATGACAATGGCATATAATAATGGCATACTACCTGTGCCACTTAAAACCTT
TAATGCATGATTGGTGACCTAGTGTTATGTTTCATTTTAAGTGAATGTTT
CTCCTTAGGTACAAGGTGGGAGTTTCATAAGATAGGGAGCATATGTTTAC
GTGAAATATTCATATGCTAATTGGGACATAATAAATGCTAATTGGGACCT
AATTTGCATATGTTTCCTTTACGGTAAATACTACGGATGTCATATTGGAG
GTGTAGGTAGCCTTAGAAAAGGTTACTACAACGGGATGTGTTTTTTCCTT
ATTTGTATCTCATTTGAATAAGTAATGCAACAGCTTCATACTTTTTCGTG
GTCAATGGTAGGGATTTCCTTTTGGAGGTATGGGTAGCTTTAGGGAAAGG
GAATACAATGGAATGTACGTTAGGCTAATAACAACTAGAATGGTTACATT
TTCGAAAATATTCAGGATTCTGCATTAATCATGAAAATTAGGTCCTTATT
AGTAAGAAGGATCTGATTTTCATGATAAATGCAGAAACCTAACATTTCTT
TCGTGGTAAATGGAGATATAAGTAGCTTGATGAAATATGTGACGTGAAAT
ATGTGACGTGAAGAAATAATTAAGATAGTAGTCAGGATAAATGTATTGTT
AAGGTTAAGCAGCAGTTAAAGTGTCAAGATTCTATTTCTCATTCAAAGGA
TTTTTTAACATTCTGACAGGAAGTATTTCCATTTAATTAGAGTACTCTAC
ATAACGAAGTAAAGTTGTCCTTTTTTTCATTTAATGGTCGAGTAGTTTGA
ATTTAATGTTGGTTGAATATGACGTTCGTCGAAGCACCATGCCATCCCAG
TGAATGCATCTGTTGTCACACTGCAATAACGGGCCTGGGAATGAAATAAA
AAATTAAATGTCAGGAAACTATGTTTTGTCTTAATGTTTTATATGTTTGT
ATAAGCAATGCCAACAATATGAGATCACACTGAATTGATAAATATTGACT
GTAAATAGACGGCATCATTTCCGCCAGAAAGGAATTTTATTGTTAAACAT
GTACAATTTAGAATAGACGATGAAAATGAAGACCATTCGCATGATAAATG
AAGAAAAAATATCATAACTCAAGATGGGATTGATTCATCATTATTTTGGT
AGGTAGATAGCCTAAGTGATGCGTTCCATGATAGAACTATTCAAACATGT
GAAAGTTGTAACTGAGGAAGAGAGGAATGTTGATAGATAAAAATATGCAA
ATGAAGACCTAACGTACATGATTAATGAATGAAAAGACCTTTATTGTGCA
TTCATGCCCCGAGGGGCTAGGTACAGGTCGTCTAACTTAACACATGGAAC
ATACAAGGATATAAATACAACAATACAAGCTGTAAACATATAGAGTAGAC
AAACGTGTTATTAAATTAAGCTAGTCCAGTAGTGTCGACTTCTTCTCGCT
TCTTTGTACATGTGTAAATGTATGAACAGACAGTATTTCTTATATAAGAA
TTATCCAAGCGTAATA Coding sequence (CDS) from alignment at Sc0000086:1110374..1122989+ >transcript:BL80143_cuf0 ID=transcript:BL80143_cuf0|Name=transcript:BL80143_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=5070bp|location=Sequence derived from alignment at Sc0000086:1110374..1122989+ (Branchiostoma lanceolatum)
ATGGCAGGTGTGCCCGGTCGTGCTCAGCCAACTCTTGAAATGGCAAATTC
AGGTGAACAGGATCATGTCATGCCCAGAAATATGAACGAGTTTGCAGGTT
CATTGGCAAGTAATCTGACATGGGCAGTCAACGGTTGGAGCAAAGAAATG
TCCCGCCTGTTGTCAGAGAATGCGAGACTGTCGGCGGAATTACGGGACCT
GAAAGAACGCACTGCAAGTGTTGCATCTGTACGTGCTGGGAGAGACCAAC
AAAATGTGGAGGACATCACAGATCCTAACAGGCCTACACAGATTGGGCTA
TTATATAACCAGTTCATTGATGGAGAACGAATGGATGCAGTAGATTCACT
TCAGAAAGAGTTCCCAGATAAGCACTATGCAAATCCAAGGCTTGTTTGTG
AAATATTTGAGGTTGCTTTTGAAGTTGCAACAGTGGCAATCTCCAGTGTA
CGTGAGCATCTACCAAGGACCTTAGTGAATCCAGCATCTCTTCGTACTCC
ACCGCTAAAACCACAACAAAAGCAACGTGCAGAGAAAGAACCTATTGAAG
TTTACTTCAAATACTCCACAACGCCTGACATGGAAACACACTACAGAGAC
GAAGACATAAAGTACATCACCAATATCATATCTGCCTACCTGAGGAGGAC
ATCAGACAGTATTGACATCATAGCAATGAAAGAGGATGTTCTGTCGGAGC
TTGAGAAAAGGTGCCCACCTAACCAGCAACGCCTGTTATTCAAGAAAGTG
CGGCTCGTGCAGAACTTTGTTTCAGATTGCTGCAAGTTGGCCTGGCAACT
AGTAGTGCAGACTCCATCGATGCACATTCAGTACAATGAAAAGACATTTG
ATAAGATAAAGCATAACCTATCAAATAGGCAGTCTTCCACAAGTAAAGCT
ACTACTAGTAAAATGATATCGATTCGCCATTACCTGTGGCCAACTTTGCT
TGACAAACTGAATGGCAAAGTTGTGTGCAAGGGTATTGTGGTCACTGGGG
AAAGCGAAGGCTAGATGGCAGGTGTGCCCGGTCGTGCTCAGCCAACTCTT
GAAATGGCAAATTCAGGTGAACAGGATCATGTCATGCCCAGAAATATGAA
CGAGTTTGCAGGTTCATTGGCAAGTAATCTGACATGGGCAGTCAACGGTT
GGAGCAAAGAAATGTCCCGCCTGTTGTCAGAGAATGCGAGACTGTCGGCG
GAATTACGGGACCTGAAAGAACGCACTGCAAGTGTTGCATCTGTACGTGC
TGGGAGAGACCAACAAAATGTGGAGGACATCACAGATCCTAACAGGCCTA
CACAGATTGGGCTATTATATAACCAGTTCATTGATGGAGAACGAATGGAT
GCAGTAGATTCACTTCAGAAAGAGTTCCCAGATAAGCACTATGCAAATCC
AAGGCTTGTTTGTGAAATATTTGAGGTTGCTTTTGAAGTTGCAACAGTGG
CAATCTCCAGTGTACGTGAGCATCTACCAAGGACCTTAGTGAATCCAGCA
TCTCTTCGTACTCCACCGCTAAAACCACAACAAAAGCAACGTGCAGAGAA
AGAACCTATTGAAGTTTACTTCAAATACTCCACAACGCCTGACATGGAAA
CACACTACAGAGACGAAGACATAAAGTACATCACCAATATCATATCTGCC
TACCTGAGGAGGACATCAGACAGTATTGACATCATAGCAATGAAAGAGGA
TGTTCTGTCGGAGCTTGAGAAAAGGTGCCCACCTAACCAGCAACGCCTGT
TATTCAAGAAAGTGCGGCTCGTGCAGAACTTTGTTTCAGATTGCTGCAAG
TTGGCCTGGCAACTAGTAGTGCAGACTCCATCGATGCACATTCAGTACAA
TGAAAAGACATTTGATAAGATAAAGCATAACCTATCAAATAGGCAGTCTT
CCACAAGTAAAGCTACTACTAGTAAAATGATATCGATTCGCCATTACCTG
TGGCCAACTTTGCTTGACAAACTGAATGGCAAAGTTGTGTGCAAGGGTAT
TGTGGTCACTGGGGAAAGCGAAGGCTAGATGGCAGGTGTGCCCGGTCGTG
CTCAGCCAACTCTTGAAATGGCAAATTCAGGTGAACAGGATCATGTCATG
CCCAGAAATATGAACGAGTTTGCAGGTTCATTGGCAAGTAATCTGACATG
GGCAGTCAACGGTTGGAGCAAAGAAATGTCCCGCCTGTTGTCAGAGAATG
CGAGACTGTCGGCGGAATTACGGGACCTGAAAGAACGCACTGCAAGTGTT
GCATCTGTACGTGCTGGGAGAGACCAACAAAATGTGGAGGACATCACAGA
TCCTAACAGGCCTACACAGATTGGGCTATTATATAACCAGTTCATTGATG
GAGAACGAATGGATGCAGTAGATTCACTTCAGAAAGAGTTCCCAGATAAG
CACTATGCAAATCCAAGGCTTGTTTGTGAAATATTTGAGGTTGCTTTTGA
AGTTGCAACAGTGGCAATCTCCAGTGTACGTGAGCATCTACCAAGGACCT
TAGTGAATCCAGCATCTCTTCGTACTCCACCGCTAAAACCACAACAAAAG
CAACGTGCAGAGAAAGAACCTATTGAAGTTTACTTCAAATACTCCACAAC
GCCTGACATGGAAACACACTACAGAGACGAAGACATAAAGTACATCACCA
ATATCATATCTGCCTACCTGAGGAGGACATCAGACAGTATTGACATCATA
GCAATGAAAGAGGATGTTCTGTCGGAGCTTGAGAAAAGGTGCCCACCTAA
CCAGCAACGCCTGTTATTCAAGAAAGTGCGGCTCGTGCAGAACTTTGTTT
CAGATTGCTGCAAGTTGGCCTGGCAACTAGTAGTGCAGACTCCATCGATG
CACATTCAGTACAATGAAAAGACATTTGATAAGATAAAGCATAACCTATC
AAATAGGCAGTCTTCCACAAGTAAAGCTACTACTAGTAAAATGATATCGA
TTCGCCATTACCTGTGGCCAACTTTGCTTGACAAACTGAATGGCAAAGTT
GTGTGCAAGGGTATTGTGGTCACTGGGGAAAGCGAAGGCTAGATGGCAGG
TGTGCCCGGTCGTGCTCAGCCAACTCTTGAAATGGCAAATTCAGGTGAAC
AGGATCATGTCATGCCCAGAAATATGAACGAGTTTGCAGGTTCATTGGCA
AGTAATCTGACATGGGCAGTCAACGGTTGGAGCAAAGAAATGTCCCGCCT
GTTGTCAGAGAATGCGAGACTGTCGGCGGAATTACGGGACCTGAAAGAAC
GCACTGCAAGTGTTGCATCTGTACGTGCTGGGAGAGACCAACAAAATGTG
GAGGACATCACAGATCCTAACAGGCCTACACAGATTGGGCTATTATATAA
CCAGTTCATTGATGGAGAACGAATGGATGCAGTAGATTCACTTCAGAAAG
AGTTCCCAGATAAGCACTATGCAAATCCAAGGCTTGTTTGTGAAATATTT
GAGGTTGCTTTTGAAGTTGCAACAGTGGCAATCTCCAGTGTACGTGAGCA
TCTACCAAGGACCTTAGTGAATCCAGCATCTCTTCGTACTCCACCGCTAA
AACCACAACAAAAGCAACGTGCAGAGAAAGAACCTATTGAAGTTTACTTC
AAATACTCCACAACGCCTGACATGGAAACACACTACAGAGACGAAGACAT
AAAGTACATCACCAATATCATATCTGCCTACCTGAGGAGGACATCAGACA
GTATTGACATCATAGCAATGAAAGAGGATGTTCTGTCGGAGCTTGAGAAA
AGGTGCCCACCTAACCAGCAACGCCTGTTATTCAAGAAAGTGCGGCTCGT
GCAGAACTTTGTTTCAGATTGCTGCAAGTTGGCCTGGCAACTAGTAGTGC
AGACTCCATCGATGCACATTCAGTACAATGAAAAGACATTTGATAAGATA
AAGCATAACCTATCAAATAGGCAGTCTTCCACAAGTAAAGCTACTACTAG
TAAAATGATATCGATTCGCCATTACCTGTGGCCAACTTTGCTTGACAAAC
TGAATGGCAAAGTTGTGTGCAAGGGTATTGTGGTCACTGGGGAAAGCGAA
GGCTAGATGGCAGGTGTGCCCGGTCGTGCTCAGCCAACTCTTGAAATGGC
AAATTCAGGTGAACAGGATCATGTCATGCCCAGAAATATGAACGAGTTTG
CAGGTTCATTGGCAAGTAATCTGACATGGGCAGTCAACGGTTGGAGCAAA
GAAATGTCCCGCCTGTTGTCAGAGAATGCGAGACTGTCGGCGGAATTACG
GGACCTGAAAGAACGCACTGCAAGTGTTGCATCTGTACGTGCTGGGAGAG
ACCAACAAAATGTGGAGGACATCACAGATCCTAACAGGCCTACACAGATT
GGGCTATTATATAACCAGTTCATTGATGGAGAACGAATGGATGCAGTAGA
TTCACTTCAGAAAGAGTTCCCAGATAAGCACTATGCAAATCCAAGGCTTG
TTTGTGAAATATTTGAGGTTGCTTTTGAAGTTGCAACAGTGGCAATCTCC
AGTGTACGTGAGCATCTACCAAGGACCTTAGTGAATCCAGCATCTCTTCG
TACTCCACCGCTAAAACCACAACAAAAGCAACGTGCAGAGAAAGAACCTA
TTGAAGTTTACTTCAAATACTCCACAACGCCTGACATGGAAACACACTAC
AGAGACGAAGACATAAAGTACATCACCAATATCATATCTGCCTACCTGAG
GAGGACATCAGACAGTATTGACATCATAGCAATGAAAGAGGATGTTCTGT
CGGAGCTTGAGAAAAGGTGCCCACCTAACCAGCAACGCCTGTTATTCAAG
AAAGTGCGGCTCGTGCAGAACTTTGTTTCAGATTGCTGCAAGTTGGCCTG
GCAACTAGTAGTGCAGACTCCATCGATGCACATTCAGTACAATGAAAAGA
CATTTGATAAGATAAAGCATAACCTATCAAATAGGCAGTCTTCCACAAGT
AAAGCTACTACTAGTAAAATGATATCGATTCGCCATTACCTGTGGCCAAC
TTTGCTTGACAAACTGAATGGCAAAGTTGTGTGCAAGGGTATTGTGGTCA
CTGGGGAAAGCGAAGGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:1110374..1122989 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80143_cuf0 |
| Biotype | protein_coding |
|
