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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80152_cuf0 >transcript:BL80152_cuf0-protein ID=transcript:BL80152_cuf0-protein|Name=transcript:BL80152_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=401bp
ISLTSIFAKVCEGFVTDWCLRDILPSIDPQQYGSLRGRSTTHYMTLLTHK
LLEAADKPGHVTTLVLTDFSRAFDSVHHETAINKLIDLGVRPSLVPWVSS
FISGRRQRVRYRGALSDWQTLTCGVPQGTKLGPLVFLALVNDAVPVNETT
ADAYKYVDDMSLSESRHVTKPTYIQDDMDALAQWTEENHMTLNPSKCKVL
LFCFMRNKPPPPEITVGPTQLEVVDFARILGVIMQTDLKWTKHVVMIVGR
SSSRLYMLRTLRKQGLDSHDLVLVYIGFVRPVLEYACQVWHPGLTVAESE
SIERVQKRACKIILGRSYTSYNSALQTLSLTPLSQRRRELCRNFALLMLK
SPVFRSWLPPARGDISTRDTRQKHLLATTRTRTNRFKNSPILYMTRLLNG
Q Run BLAST on NCBI mRNA from alignment at Sc0000187:486734..488184+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80152_cuf0 ID=transcript:BL80152_cuf0|Name=transcript:BL80152_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1451bp|location=Sequence derived from alignment at Sc0000187:486734..488184+ (Branchiostoma lanceolatum)
TATCTCCTTGACATCGATCTTTGCGAAAGTGTGCGAGGGATTTGTCACGG
ACTGGTGTCTTCGCGACATTCTCCCAAGTATTGATCCACAACAATACGGA
TCACTTCGCGGTCGCTCTACCACACATTACATGACTCTTCTCACGCATAA
GTTGCTAGAAGCAGCGGACAAACCTGGCCACGTGACCACACTTGTACTTA
CCGACTTCTCGCGTGCGTTCGACTCCGTACACCACGAGACCGCCATCAAT
AAACTGATCGATCTCGGCGTCCGGCCATCACTTGTGCCATGGGTCAGTAG
TTTCATCTCGGGCAGACGACAGAGAGTTAGGTACCGTGGAGCATTGTCGG
ACTGGCAAACGCTAACATGTGGTGTCCCACAAGGCACTAAATTGGGCCCG
CTGGTTTTCTTAGCCCTGGTAAATGACGCTGTCCCTGTCAACGAGACAAC
AGCAGACGCATACAAATATGTCGACGACATGTCCTTATCAGAATCGCGAC
ATGTGACGAAACCGACGTATATCCAAGACGACATGGATGCCCTTGCCCAG
TGGACTGAAGAAAATCACATGACTTTAAACCCCTCAAAATGCAAAGTCCT
TCTTTTCTGCTTTATGCGCAATAAACCACCACCCCCGGAGATTACAGTCG
GTCCTACACAACTGGAAGTGGTTGACTTTGCACGCATCCTGGGCGTGATC
ATGCAGACCGATTTGAAGTGGACGAAACATGTTGTCATGATTGTTGGTAG
AAGTAGTAGCAGACTGTACATGCTAAGAACTCTCCGTAAACAGGGCCTGG
ACTCTCATGACCTGGTGTTAGTGTACATCGGATTCGTACGCCCAGTGTTG
GAGTACGCCTGCCAAGTATGGCACCCGGGACTGACTGTCGCAGAGTCGGA
GTCGATCGAAAGGGTCCAGAAAAGGGCATGTAAGATTATCCTTGGTCGGT
CTTACACCAGTTACAACTCAGCCCTACAAACACTCTCCTTGACACCGCTA
TCTCAACGACGACGTGAACTCTGCCGAAACTTCGCACTGCTTATGCTAAA
GTCCCCTGTCTTCAGAAGCTGGCTGCCCCCTGCTCGCGGTGACATCAGCA
CCAGAGACACTAGGCAGAAACACTTATTGGCAACCACCAGAACTAGAACA
AATAGATTCAAGAACAGTCCAATCCTTTATATGACCCGTCTTTTGAATGG
ACAGTGACATCTAAACTTACGCATATGTTCATTGCTGCGAAGTAGTCTTA
CATTTACACATTAATGAAGACCGTTGCTGATCTGATCAGATGTTTTAACT
GTGCTTTATTGCTTTTTAGAATCATAATGTATCTGCTTGTACCAATTGAA
AGTATTATTTGTATATGCGGTATTTGTACGCAATTCAGCCAGTTGGCTGC
TATGTACTAACTGCTATGTTGTTTTAGCAATAAACCTTTCTACTACTACT
T Coding sequence (CDS) from alignment at Sc0000187:486734..488184+ >transcript:BL80152_cuf0 ID=transcript:BL80152_cuf0|Name=transcript:BL80152_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1206bp|location=Sequence derived from alignment at Sc0000187:486734..488184+ (Branchiostoma lanceolatum)
ATCTCCTTGACATCGATCTTTGCGAAAGTGTGCGAGGGATTTGTCACGGA
CTGGTGTCTTCGCGACATTCTCCCAAGTATTGATCCACAACAATACGGAT
CACTTCGCGGTCGCTCTACCACACATTACATGACTCTTCTCACGCATAAG
TTGCTAGAAGCAGCGGACAAACCTGGCCACGTGACCACACTTGTACTTAC
CGACTTCTCGCGTGCGTTCGACTCCGTACACCACGAGACCGCCATCAATA
AACTGATCGATCTCGGCGTCCGGCCATCACTTGTGCCATGGGTCAGTAGT
TTCATCTCGGGCAGACGACAGAGAGTTAGGTACCGTGGAGCATTGTCGGA
CTGGCAAACGCTAACATGTGGTGTCCCACAAGGCACTAAATTGGGCCCGC
TGGTTTTCTTAGCCCTGGTAAATGACGCTGTCCCTGTCAACGAGACAACA
GCAGACGCATACAAATATGTCGACGACATGTCCTTATCAGAATCGCGACA
TGTGACGAAACCGACGTATATCCAAGACGACATGGATGCCCTTGCCCAGT
GGACTGAAGAAAATCACATGACTTTAAACCCCTCAAAATGCAAAGTCCTT
CTTTTCTGCTTTATGCGCAATAAACCACCACCCCCGGAGATTACAGTCGG
TCCTACACAACTGGAAGTGGTTGACTTTGCACGCATCCTGGGCGTGATCA
TGCAGACCGATTTGAAGTGGACGAAACATGTTGTCATGATTGTTGGTAGA
AGTAGTAGCAGACTGTACATGCTAAGAACTCTCCGTAAACAGGGCCTGGA
CTCTCATGACCTGGTGTTAGTGTACATCGGATTCGTACGCCCAGTGTTGG
AGTACGCCTGCCAAGTATGGCACCCGGGACTGACTGTCGCAGAGTCGGAG
TCGATCGAAAGGGTCCAGAAAAGGGCATGTAAGATTATCCTTGGTCGGTC
TTACACCAGTTACAACTCAGCCCTACAAACACTCTCCTTGACACCGCTAT
CTCAACGACGACGTGAACTCTGCCGAAACTTCGCACTGCTTATGCTAAAG
TCCCCTGTCTTCAGAAGCTGGCTGCCCCCTGCTCGCGGTGACATCAGCAC
CAGAGACACTAGGCAGAAACACTTATTGGCAACCACCAGAACTAGAACAA
ATAGATTCAAGAACAGTCCAATCCTTTATATGACCCGTCTTTTGAATGGA
CAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000187 | genome | Sc0000187:486734..488184 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80152_cuf0 |
| Biotype | protein_coding |
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