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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80221_cuf0 >transcript:BL80221_cuf0-protein ID=transcript:BL80221_cuf0-protein|Name=transcript:BL80221_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=100bp
DDLPHYWRLGNNTLHIEIKERYTGNVFSRQGSYPYYTLHNALEEAFAISD
TCLLIAASGLGGSTVALLHTGNKYFVYDPHARSHTTALPDDHGSNSFILT Run BLAST on NCBI mRNA from alignment at Sc0000523:93719..110299+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80221_cuf0 ID=transcript:BL80221_cuf0|Name=transcript:BL80221_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=16581bp|location=Sequence derived from alignment at Sc0000523:93719..110299+ (Branchiostoma lanceolatum)
TGATGATCTGCCACATTATTGGCGGCTTGGGAACAACACTTTACATATAG
AAATCAAAGAGCGATACACTGGAAATGTATTTAGCAGACAAGGAAGTTAT
CCCTACTACACATTGCACAATGCCCTTGAAGAAGCATTTGCTATATCAGA
CACATGTTTGCTCATAGCAGCATCAGGATTAGGTGGTTCCACAGTTGCTT
TACTGCATACTGGTAACAAGTATTTTGTTTATGATCCACATGCAAGAAGT
CACACAACAGCACTGCCTGATGACCATGGATCATCTGCTTTAAGTATGCA
CTCATCGATCAGTAACTTATGTCAATTCTTGCAAACACTTCATCAGAACA
TGTGCAATTTTGAACTTGTAGCTCTGCAATCAGAACATGTGCCATTGTCA
CGTGATCATTCTGATGGAGAGTATGTCACACTGACTGACAACAATGTGCC
GGTGTCACACAGCTGCCTACATGTACAGACACAAAATGTTAACTCGTTAC
CTCCAGCTACATCAGCTGAAGGTGACTTACAACATTCAAACTTAGCTACC
TCTCTTCACGCAAAGACTGTGGTTAGAACACATTGCTTAATTAAGAAAAC
CACTGAGAAAAAAACAGACAAACTTGCAAAGCAAAGAGAACAGAAGAAAG
CTTTGAAACAAAGAGAAACAGATGACCAAAAGGCAGACAGACTTGCAAAG
CAAAGAGAATATGACAACGCTCGGAAACAAAGAGAAACAGCTCAGCAAAA
GGCAGACAGACTTGCAAAACGAAGAGAGCGCAACAAAGCCAAGAAACAAA
GAGAAACAGCTAAGCAAAAGGCAGACAGACTTGCAAAGGAAAGAAAGGGC
AACAAAGCCAAGAAACAAAGAGAAACAGCTAAACAAAAGGCAGACAGACT
TGCAAAGCGAAGAGAGCGCAACAAAGCCAAGAAACAAAGCGAAACAAATG
AGCAAAAATTACAAAGGCATCAGAAAGAAAACTTACTGGACAAATCCAAA
AGAGCAAATGAAAGTCCTCTGCAAAGAGCTAAACGCCTTAAGAAGTGCCG
TGACTACCAGAGGAATGCAGCTGCTTAGAAATATGTCAAAGAACATAGCA
CAGATCACGCTGAGCAAACCAATGAAGTTTACAAAGCAGAGTTCCCAGCA
TTCCATTGCTACATACAGCAGCAACCAAAACACTACTGCATTATATGTAG
GAAATTCTTATTTCATGAGCAAGTGAGAACATGTCATATTCCTATAACAG
ATGAAATGATGTACACGCATCAAAATGACAGCTCTGATCAATGTCATATA
TGTTCAAAGTGTTCCATTGCTCTTGAAAAAGAGAAACCAATAGCCAATGC
TTGGACTAACAATATGGACCCAGGTGACATCCCATCATGTCTTAAACAGC
TCACTAGAATGGAAACAAGACTTGTCAGCCTTAAGTACACATTTTTAAAG
CTGGTTATCCTACCAGGTGGACAATATGGTGAACAAGGCCAAGCCATACG
TTTCTCTACCAACATTGAAACTTCTTGCAATCTGTTGCCACGCTGTCAGG
ACACATCAGGAATTGTACTAGTACATCCCTCTGAGACTGATGGTAGTACA
CAAAGAAATGATCCCCAATACATTGTACGATATACTCACATGCATGAAGC
ACTCACATGGCTGATGAATAATAATGATCTTTACTCAGATGTGAACATAA
CTTGTTTTGAAGATTGGAACCAAGCATCATGCGAATTCTATTCAACAGTT
GCCAACAATGGTGAAATTGATCAATCAAATGAATCTTCTACTGTCACAGA
GCTGTCTTCTATTCCTTGTAACTACACCAACCCAAATGTTCCCTTACAAT
CTCTGTTACAGAGTGCAACAGACACTATACCAGCAATATCACTCCCTCGT
GAAACATCAGCACCACAAAGTATTTTTAAGGAGAAAGACCTTGAGGAGCA
CTGCTTCCCCCAGTTGTACCCATATGGTCGTAATGGCTTCCAAGAGACAA
GAGATATAAAGATGACAGACTTACAGTACTTCCAATCACGGCTACTTAAC
ATCAATGATTGCTGGAGAAAAAATATGTCTTGGCTCTTCTTTGCTTTGAA
CTCATATGAAATCAAGAAACTGTACAGTCAGATATCCATTGTATGTAGAA
TGCAGAAGCAAGGAAATGTAACCTCACAATTTTCTTGCCAACCTCTGACA
GCAGGGGATCTGCGTCAAAATATTGATGAAGACATTGAATGCACATCATA
CACTTTCATGAAGAATATCCGTGGAACAGCAGCATACTTTAAGGACCAAC
TGCTTAACCTACTTGCAAAGATCAACACAATTGGCCCACCGACATGGTTC
CTTACTGTCTCAGCAAATGATTTGAACTGGCCAGAGCTCTTCATGAGTCT
CAATCCTGATCTGACATATGAGGAAGCTAAAGCATTACCGCAACAAGACA
AATGGAACAAGATGTGTGCCATACACTTCAACAGACGCACTGATGCACTC
CTTCGCTTCATACTGAACAGTCCACAACATCCTATTGGTGTGATCGCTGA
CCACTGGATTCGAGTGGAGTTTCAGCTAAGGGGCTCACCTCATTTGCATT
GCATGTTCTGGGTTGAAAATGCCCCCAACCTTGATACCATAGAAGGAAGG
CAAAGAGCACCTGAATTCATTGACAAATATGTGTCCACACAACTACCTGA
TGATGAAAACTCTCTCCTACATGAACTAGTGTCCAAATACCAGCGACATC
ATCACACAAGCACATGTAAGAAGACACGAATAAACTGTCGATTTCACTTC
CCTCGAGAAGTGTCAGACACCACACGACTCAGGCTAGATGTTGATGCTAA
TCGCAGTGCACAGTTCTATGTTACAAAACGAACGCAACAGGACATCTGGA
TCAATGCATACAACCCCACATTGCTCTTACACATGCAATCTAAGATGGAC
ATACAAATGGTTGGGTCCAAGTATGGTGCTGCCTACTATGCATGTATGTA
CATCTCAAAATCTGAGCCTGATGGTCTTCACACTGCTATCTCTGCAGCTC
TGTCAAATCTACCACCTAACAGTACAAAAAGAGCGCGTTTGGCCCAAATT
GGTAACACTGTACTCAGCCATCGCCTAGTTGGCGGACAAGAGGTTGCATA
CAGACTTGCAAACCTGCAACTTATACACTCATCAAGACAAACAGTGTCAA
TAAGCACCAAACCACCACACAAAAGAATGCGTCTGCTCAAACCGAAAGAC
GACCTTGACAAGCTTGACAATTCATCATCTGATATTTTCACAAAGGGCAC
TGCTCAATACTATTCAATGAGACCACATGGTGATCCCTGGGATACAATGT
CCTTATTCACCTTTGCTGCAACATACGTCATCACACCCACTGAGCCATCA
AGTGCTTCTGAAACTAGCAAGTTACAACACTGTGACAAATGGATAAGGAA
GCGTCAAAAGCTTGCCTGTGTTAGAAGTTCAAAGCTAAGCTCTGGAAATG
GAGATGACTATTTCTATGGTCTCTTGTATCTGTACTACCCATGGAGAAAT
GAAAGCGACATCCTCGGTCAATATGATTCTGCTCAAAATGCTTTCTCTGC
TAAGAAGGATCAGTTTGATGACAGTCTTGCACAGCATCTCCACTTCACAT
CAGAAATAGAACAAGCTATCATGCAAGTTCGTCTGCTATCAGATGATCTA
ACATCTATTGCTACCACACTTGCCCCTAATGTGACTCACCAACAGTTGCA
AACTGAGCATGACTTTGACACTGCAGGACTCCATCTTAATGCACAGTGGA
CAGCACAAAATGCAGAACAAGCATCAGCTGCTGCTGCTCAAACTAACACT
GTTGACACAACATCTTCAGAAAACCTCACAATGTTACATGATGATTCACT
CACATGGAATACTCTATCTCGCTACACAATGACTGATGATGCATTCTATG
ACGCGCTCAGTAACATGTCACATGACCAACAACAGGTTTTTAACACAGTG
AAAGAACACTTTTTGTTGATAAATAGACACCAAGCAGACCAAGCTTCTCC
AAAACCACAACCTTTGCGACTCTTTGTAACAGGAGGAGCAGGCTGTGGAA
AAAGCTTTCTCATAAAAGTCCTGAATGAGTACTTGATCCGTACATCAAAC
TGCCAAACATCTCCTGTCATTCTAACTGCACCGACAGGTGTCGCTGCATA
TAACATAGGCGGTTCTACAGCACATTCAGCTCTGTCACTACCTGTTGACC
ATGGTCCAACTCAAAGAGGTCAAACCAACTATCTACCACTCAGTGCTGAG
AAACTCTCACAACTTCGACGCAAATTCAACGATGTACATACACTTTTCAT
TGATGAAATAAGCATGATCAGCAATACCAGACTAGAACACATTCACCTTC
GCCTATCAGAGATCAAAGACACTACTACTGACCAACACAGCTACTTTGGC
AACCTCAATATCATAGCTTTTGGTGATTTCTACCAACTGAAACCTGTCTT
TGGAAGATTCATATTCGAAGACTCACCAAACCAGCAAGAACCTTTCACTC
ACTTGTGGAGAACACTATTCAAGCCATTATTTCTAACAGTCAATCACAGA
CAGGAAGGTGACAAAGAGTTCACAGAACTGCTTAACAGAGTACGTATTGG
ACTCCCAACCAATGCAGATATTGCCCTACTTTCAACTCGTATCAAGACAA
GAGAAGATATTGAACAGTCTGCCTTTTCCATGGCTCTTCACGTTTTCCCA
ACAAGAATAAAAGCTATAAACCATAACAAACAAGAACTGGAAAGACTGCA
TCCTCAAACAGATACTCAGATTCATGTACTGACAGCAAACGATGAAATGG
TCAGTGGTCCTGTCAATGCAAAAAACATACCTGTACAAGATCTCATATCA
GAAGACACCAGTCAAACAGCAGGACTTGAAAAAGAACTTCGCCTTGCTCA
AGGTTGCCGAGTCATGTTATTAAGAAATATTTTAAGTGAGGATGGGCTTG
TAAATGGTGCACAGGGCACAGTACAAGACTTCCTATAACAGGACTTGGAA
GATGACGAACAATGCAATTCAAATGTACAAACTATCACAGGAGTATATGT
AAAGTTTGACAACCCCAGGGTTGGTCAAATGATACAAGACCCTGCCAGGA
ACAACGCTATTCTTATCACACCAATCACAGCAAGATTCTTTGCACACTAC
AGCACTGTTTTCACTCGTACACAGGTCCCACTTCAACTTTCTTATGCATC
AACTGTTCACAAGGTACAAGGCCTCTCATTGTCAAAAGTTGTACTTGACA
TAGGACCAAAAACTTTCAGCCCTGGACAGATATATGTCGCTCTCAGCAGA
GTTACCTCACTTGAAGGTTTGGCCATACTGGAGTTTGAACCGAAGAAGAT
AAAAGCATTTCCATCTGTCTTAAGAGAGATGACAAGACTAATAGAAAGTG
TTACACCAAGAGATCAACCAACAGAAAATAAGTGACAATACATATGTTCA
TATCACAGTTAATATAAGATTGCATACTGGACAAATATACATAGAAAGCC
TATTGAACTATGCATGTATACAATTTACAAACACTGCATCAACTTTGAAT
TGACACAACTCTTCTTGAAGCTTTCATTGCATTGTCTACAAAGCTCACCA
CTGGGAAGATAAACACACCTATCTTACTAATTGCTATTAACACAAATGCA
TGCAGCTCAAAACTGAAGTATATGGCAATAAACAAAAATGTGCCACTTTA
CAAAGTACATTATTTTTTCACACATGATCAATATCTTTAAAACCAAACAA
TTTATTTTTGAAAAATCTTACTACAGTACCTGGACTACACTCGTGCATGC
AGTACCCACTCAGTTGGTCACAGTACCTAGACTCCACTCCTGCATGCAGT
ACACACTCAGCTGATGACCACTGTACCTGGACTCCACTCGTGCATGCAGT
ACCCACTCAGCTGGTCACAGTACCTGGACTCCACTCGTGCATGCAGTACC
CACTCAGCTGGCCACAGTACATGTANACAGTCTGCCTTTTCCATGGCTCT
TCACGTTTTCCCAACAAGAATAAAAGCTATAAACCATAACAAACAAGAAC
TGGAAAGACTGCATCCTCAAACAGATACTCAGATTCATGTACTGACAGCA
AACGATGAAATGGTCAGTGGTCCTGTCAATGCAAAAAACATACCTGTACA
AGATCTCATATCAGAAGACACCAGTCAAACAGCAGGACTTGAAAAAGAAC
TTCGCCTTGCTCAAGGTTGCCGAGTCATGTTATTAAGAAATATTTTAAGT
GAGGATGGGCTTGTAAATGGTGCACAGGGCACAGTACAAGACTTCCTATA
ACAGGACTTGGAAGATGACGAACAATGCAATTCAAATGTACAAACTATCA
CAGGAGTATATGTAAAGTTTGACAACCCCAGGGTTGGTCAAATGATACAA
GACCCTGCCAGGAACAACGCTATTCTTATCACACCAATCACAGCAAGATT
CTTTGCACACTACAGCACTGTTTTCACTCGTACACAGGTCCCACTTCAAC
TTTCTTATGCATCAACTGTTCACAAGGTACAAGGCCTCTCATTGTCAAAA
GTTGTACTTGACATAGGACCAAAAACTTTCAGCCCTGGACAGATATATGT
CGCTCTCAGCAGAGTTACCTCACTTGAAGGTTTGGCCATACTGGAGTTTG
AACCGAAGAAGATAAAAGCATTTCCATCTGTCTTAAGAGAGATGACAAGA
CTAATAGAAAGTGTTACACCAAGAGATCAACCAACAGAAAATAAGTGACA
ATACATATGTTCATATCACAGTTAATATAAGATTGCATACTGGACAAATA
TACATAGAAAGCCTATTGAACTATGCATGTATACAATTTACAAACACTGC
ATCAACTTTGAATTGACACAACTCTTCTTGAAGCTTTCATTGCATTGTCT
ACAAAGCTCACCACTGGGAAGATAAACACACCTATCTTACTAATTGCTAT
TAACACAAATGCATGCAGCTCAAAACTGAAGTATATGGCAATAAACAAAA
ATGTGCCACTTTACAAAGTACATTATTTTTTCACACATGATCAATATCTT
TAAAACCAAACAATTTATTTTTGAAAAATCTTACTACAGTACCTGGACTA
CACTCGTGCATGCAGTACCCACTCAGTTGGTCACAGTACCTAGACTCCAC
TCCTGCATGCAGTACACACTCAGCTGATGACCACTGTACCTGGACTCCAC
TCGTGCATGCAGTACCCACTCAGCTGGTCACAGTACCTGGACTCCACTCG
TGCATGCAGTACCCACTCAGCTGGCCACAGTACATGTAGTGATGTACTCC
AGTCGTGCACGCAGTACCCACTCAGCTGATCACAGTACCCCTACTCCAGT
CGTGCATTCAGTACCCACTCAGCTGAACACAGTACCTAGACTCCACTCCT
GCATGCAGTACACACTCAGCTGATGACCACTATACCTGGACTCCACTCGT
GCATGCAGTACCCACTCAGCTGACCACATACCTGGACTCCACTCGTACAT
GCAGTACCCACTCAGCTGACCACAGTACCTGGATCTACTCGTGCACGCAG
TACCCACTCAGTTGGTCACAGTACCTGGACTCCACTCGTGCATGCAGTAC
CCACTCAGCTGGCCACAGTACATGAACTCAAGTCATGCACGCAGTACCCA
CTCAGCTGGTCACAGTACCTGGACTCCTCTCGTGCATGCAGTACCCACTC
AGCTGGCCACAGTACATGTACTCAAGTCGTGTGCGCAGTACCCACTCAGC
TGGTCACAGTACATGTACTCAAGTCGTGTGCGCAGTACCCACTCAGTTGG
TCACAGTACCTGGACTCCACTCGTGCATGCAGTACCCACTCAGCTGGCCA
CAGTACATGAACTCATGTCATGCACGCAGTACCCACTCAGCTGGTCACAG
TACCTGGACTCCTCTCGTGCATGCAGTACCCACTCAGCTGGCCACAGTAC
ATGTACTCAAGTCGTGTGCGCAGTACCCACTCAGCTGGCCACAGTACATG
TACTCAAGTCGTGTGCGCAGTACCCACTCAGCTGGTCACAGTACATGTAC
TCAAGTCGTGTGCACAGTACCCACTCAGCTGGTCACAGTACCTGGACTAC
ACTCGTGCATGCAGTACCCACTCAGCTAGTCACAATACCTGGACTCCACT
CGTGCATGCAGTACCCACTCACCTAGCCACAGTACATGTACTCAAGTCGT
GCACGCAGTACCAACTCAGCTGACCACAGTACTTGTACTCCAATTATGCA
CGCAGCACCCCCTCAGCTGGTGACCACCGTACCTGGACTCCAGCTAGACT
GGTCACAGTACCTGGACTCCAGTCCTGCACGTAGTACCCATTCAGCTAAC
CACAGTAGCTGGACTCCATGCATACACCAGTATCACAATCAGCTGTACCA
CTACTTCAGTACTTAGTCAGGTAACTACTGTACCTGGACTCCACTTGTGT
ATCTGTACCCAGCCTCCAGTTATACAGGCAGCAGCTACTCAGCTGACAGG
AGTATCATCACTTCAGTCCTGCATGCACTACCCAACGAGCTGACGCCAGC
ACCAGGACAGACTTCAATCATCCATACAGTACCCGTTCAGCTGATCACAG
TACCCAGACTACAATAGTGCATGCACAGTACCCAGACTACAACTACAACA
TATCACGTCATAGTAACCGATGTCCATTCCCAAAGTTATATTGTCTTATT
GTCATAAATAGTTGTCCTATGATCTAGTTCCAAAATTTAAAACAGAAACA
GTTCTCATGAAAATAACCATCGTAATGATGAGTACATATATGCAAATGAT
TATTAATTTCTATATTTTCTCAAACCATTGCAAATAAAAAAGTCTATGTA
ACCTATTACTTGAGTGCTCTGCCTCATTACCCAATATCTCAAATCACATA
AACCTGTAATAGTACAAAAACTTCCATCCCATCATTTTATTACATTATTT
TTCTATCACAAAGTCTCAAACTTTTCTTACTACCCTAACATTATATTATC
ATACACAATAATATTTATTTATTTATTCATTTATTTCTGCACCTCACAAA
ATTTCCATAAATCATACACTATTCAGTACTGTTTGCTACATTGTAAATTC
CCACATTTGATAATCACAGCTGTAGAGTTCAGATCCAGAATATTAGTTTA
CAACATCAGAGAACAATCTGCCTTTTTCTTTAAAAACAATGTATTTTTAA
ACAACCTACACCATGAATTAGCATTATTCTTATATCACAAAGCTGTACAT
CTTATTAACATTCATATGTCGTTTGTCGACCTATAGAATCTTTTTTATGA
ATCATTTGACTTTTGCCATATGTAACGTTAGTTATTTCGTTAACGATCGC
AAGATGTCGCTTTTGATACGACTGTTGCAGATGAACAAAATTTATACTTT
TCGTTATCCTCCACACCCATTTAACACTATAAACCCTATTTAGTTGTTAC
ACACCAACCAGTTACAAATATCATCTAAACCAACGTGACTCTCCTTCGTA
CCGACTGTACTTGACAACTACTTTAGTCCAGTAGAAAGCGCTTCAAATAT
ATCGAATCTTAGACAGTTATGTTTCCCATAATCCTTTACGCGCCTGGGAC
AACAACAACATCTCAGCGCTCACAACACCCCACCCGTTGTTCCGTGCAGT
AGCTGTCAACAGTTCGTGTACCATTTCAAAGTAAGTATTTTTCGTCTGAA
CTTTCCACATACATGTAAACAACATTCATAAAGTATAGCTGTACATACTC
TCCATTTTATCACTTTTGATTAACCCTTTGAATGATCCATTTTCGAACTC
AGCTTCGCCTACCACACCAGTCTCCACGCACGCCAATATTTTACCGTATA
AACCTTGATCTAAATACCATATATATTCTTGCTCTTGGCCCAAGCGTTAA
CATAGTACCTTTTACCAGAATTTCTGCACAATATGTCAGTCACTGTTTAT
ATTCCTGATGAACAAATTCACACAACAAAACAAATTCATTCCAACGATTT
GTCCACTGATTGATCAAAAACAGAATTCTCCCAACCCCCAAAACTTTGCT
GTCCACTGTTTCTATATTAAACAGCCTCTTCTTGTACAACAAAAGTAAAC
GAAGCTGACAAATTACGATACCCCACATCATAACAAGTCTTCTCCTAACA
CTTCATATCAATTATTTCTCGTCTCGTCAAAGATTTTCAATGAACATCAA
TCTCGCCATTCTCTCAAGAGCGAACCTACAGTAATTTTTCAGCTAAAAAC
GATCAAATCGGCAATTCTCCCAACCCTTATAAGTCCAGCCCTTTGCCAAG
AGAACTCTATCAGGTTTTCTTATCTTTATCTTTCCTGTTTGAAATGGCCT
CAACAAAATAACAAAATTTATCATGACAGAGACACAATAACCAAATTAGC
ATCTGATACCTGTTACTTACATCTGTAACAGTTAGGTAATAGACAACGTA
GGCTTGACGTATTAGATAGAAACCAGATGTAGGCCAGACAAGCTATTGGT
TGGTTCCCTATCTAGTCTGGCCTACATCTGGTTTCTATCTAATACGTCAA
GCCTACGTTGTCTATTACCTAACTGTCCAGGGTTTGACAAGGAGCAAAAT
CGTAGTGTCAGCCAGACAGGGTTGTTGGAATTCGCTGTCCAATCGGATTG
GTGGAAACAACTGTCCTGTCAGATTTTGGGGTGGAAAAAGCTAACCGACT
GTTGCTGCATATGGTTACGCCCTCTAGCAGAAATTAAGAAAGTGCAATTA
GTCTGAAGTTTTACCACATGTCATAGCGTGAAGTGCACCCATTGGATACA
AACATGCAAATGCAGACAATGCGGCCGGGGAATGCAAGCGACAGTTTATG
TCAACAATGGACCAACTAGACTCATCAAGACAGCTATTTGCCCCCCAACC
CCAATAAACAAATAGCTGTTGTGCCGAGTCTAATTGGTCCATTCTTGACA
TAAACTGTCGCTCACATTCCCCAACCACATTCATATGCGCAGGCGGCAAC
GTGACTTAAACAGTGCCCCTCCTACACAGCGAGACTGTGTTATTGGGACT
GTATCAGTGGTGTTTTGTAAAATTAGATTTAGTTACATGTACATAGGTTA
TAGTGAACTCCTTTCTGCGTTCAATTTTCTGAGGGTCGCACTATATCACT
ACCTCAGTAAACAAAGAGCTGTCAAACACGTCTTGGTCTATAATTAAAGT
GTCGCTCAGATTCTCCGGCCACATTGTCACCATTTGCATGCTGCACTTGT
ATCCAATGATCGTGCTTCATGCCATGACATGCGGTAACACACTAGACTTC
TTGCACCTTTCTTAATTTCTGCTAGGAGGCGCAATCACACACGAAACTAG
TCAAACAGCTTTTTCCACCCCGAAATCGGACCGGGCAGCTGTTTCCGCCA
ATTGGACCGGACAGCTAATTCCAACAACCCCAGCCATACACCCTTCAGTC
AAGCCAGCCAGTCTATGGCTGACATTATCAGTAGCACATATAACGTTAAC
GTTATCAAATTTATATCACTGAAAAATTCAAAAGTTCACACCCTTTAATA
ACATTCTTGAACAAATTTAAATTCAATAACTGGAAACAAACATTCACAAA
TGCAAATCTAACCATTGTAAACTTCTCCAAAAGCACTTGCTTGTACAACA
ATATTTATCTCATTTTTTTTATTTCTCATCCACCAGTACACAGCTTCTTG
TCACCATGGCTGACCCACCTCCACTTCATGGCTATATCAAGGGTCTTTCT
CCCATTAGAGCCGGAAAGACAGGCACCAATTTCTTCAGATTTAACTTCCA
AGAAGAACACAGCACCAAGAAAGTAATATGTTTTTCTCCAGTGAAGAGAC
AGCTGATTTCCGACAATGAAAACACAACATCACCTTGTAAGATCACTAAA
TATCAATCATCATCCAATCCAAGCAGCGACATAATCTTCACTGAACACAC
TGAAATCCAAGAATCAGAGGCAACCTTCAACATCACAGACTCAGTAACAC
TACCATCTAAAATCAAGGACATCCAAAAAACAGCCAACAACCAAGAAGTC
ATAGTAGAAGTCAAGATAACATCAATGGAAGACACCGAAGTTATCCCCAA
AGGCTCCAAACAGTTCAAGAAAAGAGAATGCAAGGCTACGGACGAAACCG
GTTCCATCAGGTTCGTGGTATGGGAACCAGACAAACTGCCTTTGGAAAAA
GGTCGCAGCTACCACCTCAATGTTCGTGTCAAAACTTACAATGGCAGAAA
GTACATCTCAACGACACCTGACACAACAGTCAATGAAATAGAACACCTTG
CCATTCCAGATGAGCCAACGCCAGAACTTGACAGGGAAGATATCAAGGGA
GATATCATCTCCTTAGAAATCATGTGCAGATACCTCAGGTGTAATAACTG
CAAAAAGAAAGTTCCTGACTCCGCAGAAAAAATGGTAACCTGCAACAATT
GCAACATGTCACAACTATCACGAAAATGTCCAAAAGACATCTGCCTCAAG
TTGCTTGTACAAACAAAAGAACACAAAATCTGCCTCACATGTTTTGCTAA
CACAATAGAATACTTCATGGACAAGAACCCGTATGATATGTCAGATGATG
AGTTAAAGCTCGAAGTGCTAGAAGCTGGGGAAAATCTGACGATTTCATTC
AATCCCTTGACAAAGATATGCACATCTATCAACTAGTAAAACTACAGTTT
ACTACGTATGTTTCTAACTCAGTTGTGCCTCAGAATTTTCTTTTTTTGTA
ACATCTAATGATGTATGATGATTCAACAGCTGTTTAACTGCATTTCAAAG
ATTATGATACGGGGGAAAACATTTTCAGTTTAGTCAAACCAAACAGTTCA
TGGTTAAAGGCTAGCCTAGAATCCAACCCTATTATAGCTCCCGAGTCTCT
CTACTATTTGCAGTGGAGAGACTCCGGAGCTATAATAGGTTTGGATTCCA
GACTAGTTAAACGCACCTTTACTTGTTAACTTGTCCAGGTTAGTGTTAGT
TTATTACTTAACGTATAAGTTCACCATTTGAGTTCTTGCTGACAGCAAAA
CCTTCTGAACAAATGCTTGTGTACAGGACAAGATGCATATATAAAACCAG
TAGAAAAGGCTTGTTCTTGCCTACGTTTCTGACTAAGTTGTGCCTCACAA
TTTTGTTTTTTCATACATATACATGTATGATAATTGAACAGCTGTATAAC
TGCATTTTTAAGATTATGATACAGTGAAAAACATTTTCAGTAAAGTCAAA
CCAAACAATTAATGGTTGAAGGCACCTAAACTTGTTAACTTGTCCAGGTT
AGTGTTAGTTTATTACTTAACGTATAAGTTCACCATTTGAGTTCTTGCTG
ACAGCAAAACCTTCTGAACAAATGCTTGTGTACAGGACAAGATGCATATA
TAAAGCCAGTAGAAAAGGCTTGTTCTTGCCTACGTTTTTGACTAAGTTGT
GCCTCAGAATTTTGTTTGTTTTTTCATACATATACATGCATCATAATTGA
ACAGCTGTATAATAGCATTTTTAAGATTATGATACAGGGAAAAACATTTT
CAGTTAAGTCAAACCAAACAATTAATGGTTGAAGGCACCTAAACTTGTTA
ACTTGTCCAAGTTAGTGTTAGTTTATTACTTAACGTATAAGTTCACCGTT
TGAGTTCTTGCTGACAGTGAAGCCTTGTGAACAAATGCTTGTGTACAGGA
CGAGATGCATATATAAAGCCAGTAGAAAAGGCTTGTTCTTGCCTATGTTT
GTGACTTAGGCCACAGCAAGTAATTTTTATGGATGACATCAGCGCGCTCA
TTAATTTTCGCCTGATTTCGAAATAAAAAACAAGAAATTTCATTGCCCTC
CGACGGTGGTCAACATGCCAAAAATGGGCAAATATGTCGTAAACGTTGAG
GTGTTTCATTGCATATGAATACACAGTGTAGCCCATGATGGTATGACAAG
CTGTTTTCTGCGTTTGTTCTAGTTAATTGAGCTGCACATCTTCAAGAACA
GTTTAATGTTGACAGTCTAAGGTGTTTCATTGCATATGAATACCCAGTGT
GGTTCCTGCCCATAATGGTATGATAACAAGCTGTTTTCTGCATTTGTTCT
AGCAAGGACATTATATAAACAATGGGGGGGGGTCTAGTTAATTGAGCTGT
ATACACAAGGTGTTTCATCACATATGAATACCCAGTGTAGTTGCTTCAGA
TGATGGTACAACAAGATCTTTTCTGCATTTGTTGTAGTTAGTCTATTGAG
ATGTATACACATCTACAAGGACATGTTTACTGTTGAATCAAGGAGGTTTT
ATATTATATATGAAACCTCATTGGTTGAATACAGGAATAAAAGACCTGTT
GGTCATGATATCATACTAGTACGCCTCAATTCTTGTTTAACAAGANCAGG
AATAAAAGACCTGTTGGTCATGATATCATACTAGTATTTCGTCGCCTCAA
TTCTTGTTTAACAATATTTATGACCTCAAAATTTGAAAATATAGGAATCT
TGTTTTTTTTGCCCGCCTTGTTTTTTTTTCGCCCTATCTCATTAATTTTG
GAGTCTGCGGAGGATGTCATCCATAAAATTTACTTGCTGTGGCCTTAGTT
GTGCCTCAGAATTTTGTTTGTTTTTTCATACATGTACATGTATGATAATT
GAACTGCTGTATAACTGCATTTTTAAGATTATGATACAGGGGAAAACATT
TTCAGTTTAGTCAAACCAAACAGTTCATGGTTGAAGGCACCTTAACTTGT
TAACTTGTCCAAGTTAGTGTTAATTTATTACTTAACGTATAAGTTCACCG
TTTTAGTTCTTCCTGACAGTGAAGCCTTCTGTATACTACACGGATGCTTG
GGTAAAATTCTTGTTTAACCTTGTTCAAGTCCAATGTCTACTATATTTTG
GCAGGGCATCAAGAAAGTTCTGTTTAGATATACTGCACAAATGCTTGAGT
AGAGTTCTTGTTTAACCTTGTTGAAGTCCAATCTCTACTATATTTTGGCA
GGACACCAAGGAAGTTTTGAGGACACCAAGGAAGTTTTGTTTAGATATAC
TGCACAAATGCTTGTGTAGAGTTCTTGCTTAACCTTGTTGAAGTCCAATC
TCTACTATATTTTGGCAGGACACCAAGGAAGTTTTGAGGACACCAAGGAA
GTTTTGTTTAGATATACTGCACAAATGCTTGTGTAGAGTTCTTGTTTAAC
CTTGTTGAAGTCCAATCTCTACTATATTTTAGCAGGACACCAAGGAAGTT
TTGAGGACACCAAGGAAGTTTTGTTTAGATATACTGCACAAATGCTTGTG
TAGAGTTCTTGCTTAACCTTGTTGAAGTCCAATCTCTACTATATTTTGGC
AGGACACCAAGGAAGTTTTGAGGACACCAAGGAAGTTTTGTTTAGATATA
CTGCACAAATGCTTGTGTAGAGTTCTTGTTTAACCTTGTTGAAGTCCAAT
CTCTACTATATTTTGGCAGGACACCAAGGAAGTTTTGAGGACACCAAGGA
AGTTTTGTTTAGATATACTGCACAAATGCTTGTGTAGAGTTCTTGCTTAA
CCTTGTTCAAGTCCAATGTCTACTATATTTTGACAGGGCATCAAGGAAGT
TTTGTTTAGATATACTGCACAAATGCTTGAGTAGAGTTCTTGTTTAACCT
TGTTCAAGTCCAATGTCTACTATATTTTGGCTATGTTCTGTTTGGATATG
GCTAGATTATAACTTACAGTACTTCAAAGTTGACTTTCAGTTTTGTTACA
TTTTCTTGTTATGTTAATAAAAAAACATGGCAGTATACATTACTTGTTTG
CAGTATTCTTTGCAGAGTTATGAGATTTTAATATTATCTTTAAAAAAAAC
CAAAATCAGGACATTACATGAGTATATATATATATTATATGTACCTGAAT
CAAATTTCAAATATTCATACTGTTGGTGTATTTTTTCTTCAATAAGGGTT
TATCCTTTACTCTGGATTTGTCATTACCTACCTAAATTTCCCTCTTGGTG
CTCATACATCACGGGCAAATTGTGAAAAACCTGTTGCGCAGGTCTCAAAA
CGAAAGCGAATCTACTGAGTAAGAAGCATACTAGTAAGTGTGCAAAATCA
ACAGTACCTGGAAGTCAAATTCATTCACCTTTATTGGTGTATAACATTTA
AACAGACATTTGTAGGGTCAGCTACAATATTACAGATTTTCAAAGATAAA
ACCACTGATACATGAAGTAGCAATAATATACACATGTTGATATTAAGTGC
TAAAGTCATTAGCAGAGTCAGCTACAATAAACTTTCGTTTGAATTCTCTT
GAACAAAATATGCTACCACCTAAGACCTAAGTTTAACCCCAGCTTGCATT
GCTTTTTTCACCATACTCAGGTACAGTGGTGATTGCACATCATAAGACAG
TACATGTATTCCTAAGTTCTAATAAAACAGTATCTTGACTAGTTTGTCAG
GTAATATTGATGCCCTATGCATCTCAAAAATATATAGACAAAAGTCTTTG
CAAAAATTTTACAAATAGCTTCATATTGACA Coding sequence (CDS) from alignment at Sc0000523:93719..110299+ >transcript:BL80221_cuf0 ID=transcript:BL80221_cuf0|Name=transcript:BL80221_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=600bp|location=Sequence derived from alignment at Sc0000523:93719..110299+ (Branchiostoma lanceolatum)
GATGATCTGCCACATTATTGGCGGCTTGGGAACAACACTTTACATATAGA
AATCAAAGAGCGATACACTGGAAATGTATTTAGCAGACAAGGAAGTTATC
CCTACTACACATTGCACAATGCCCTTGAAGAAGCATTTGCTATATCAGAC
ACATGTTTGCTCATAGCAGCATCAGGATTAGGTGGTTCCACAGTTGCTTT
ACTGCATACTGGTAACAAGTATTTTGTTTATGATCCACATGCAAGAAGTC
ACACAACAGCACTGCCTGATGACCATGGATCAAATAGCTTCATATTGACA
GATGATCTGCCACATTATTGGCGGCTTGGGAACAACACTTTACATATAGA
AATCAAAGAGCGATACACTGGAAATGTATTTAGCAGACAAGGAAGTTATC
CCTACTACACATTGCACAATGCCCTTGAAGAAGCATTTGCTATATCAGAC
ACATGTTTGCTCATAGCAGCATCAGGATTAGGTGGTTCCACAGTTGCTTT
ACTGCATACTGGTAACAAGTATTTTGTTTATGATCCACATGCAAGAAGTC
ACACAACAGCACTGCCTGATGACCATGGATCAAATAGCTTCATATTGACA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000523 | genome | Sc0000523:93719..110299 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80221_cuf0 |
| Biotype | protein_coding |
|
